RNA–Protein interactions for RNA: ENST00000354955.4

FMOD-201, Transcript of fibromodulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FMOD, Length 3,310 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMOD-201ENST00000354955 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
FMOD-201ENST00000354955 TIAM1Q13009 1591 aa11.47□□□□□ -0.57
FMOD-201ENST00000354955 CFTRP13569 1480 aa11.47□□□□□ -0.57
FMOD-201ENST00000354955 C20orf194Q5TEA3 1177 aa11.46□□□□□ -0.57
FMOD-201ENST00000354955 CRBNQ96SW2 442 aa11.45□□□□□ -0.58
FMOD-201ENST00000354955 SLKQ9H2G2 1235 aaPredicted RBP11.45□□□□□ -0.58
FMOD-201ENST00000354955 FMN1Q68DA7 1419 aa11.44□□□□□ -0.58
FMOD-201ENST00000354955 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
FMOD-201ENST00000354955 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
FMOD-201ENST00000354955 UACAQ9BZF9 1416 aa11.44□□□□□ -0.58
FMOD-201ENST00000354955 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
FMOD-201ENST00000354955 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
FMOD-201ENST00000354955 RRP1P56182 461 aaKnown RBP11.43□□□□□ -0.58
FMOD-201ENST00000354955 NAIPQ13075 1403 aa11.43□□□□□ -0.58
FMOD-201ENST00000354955 GZF1Q9H116 711 aaPredicted RBP11.42□□□□□ -0.58
FMOD-201ENST00000354955 CFDP1Q9UEE9 299 aaPredicted RBP11.42□□□□□ -0.58
FMOD-201ENST00000354955 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
FMOD-201ENST00000354955 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
FMOD-201ENST00000354955 PNISRQ8TF01 805 aaKnown RBP11.41□□□□□ -0.58
FMOD-201ENST00000354955 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
FMOD-201ENST00000354955 FRAT1Q92837 279 aaPredicted RBP11.4□□□□□ -0.58
FMOD-201ENST00000354955 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.59
FMOD-201ENST00000354955 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.59
FMOD-201ENST00000354955 USP47Q96K76 1375 aa11.39□□□□□ -0.59
FMOD-201ENST00000354955 NFKBIBQ15653 356 aa11.38□□□□□ -0.59
FMOD-201ENST00000354955 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
FMOD-201ENST00000354955 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
FMOD-201ENST00000354955 NBPF1Q3BBV0 1214 aa11.37□□□□□ -0.59
FMOD-201ENST00000354955 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
FMOD-201ENST00000354955 BCL2L13Q9BXK5 485 aa11.35□□□□□ -0.59
FMOD-201ENST00000354955 BACH2Q9BYV9 841 aa11.35□□□□□ -0.59
FMOD-201ENST00000354955 HFM1A2PYH4 1435 aa11.35□□□□□ -0.59
FMOD-201ENST00000354955 GSE1Q14687 1217 aa11.34□□□□□ -0.59
FMOD-201ENST00000354955 NESP48681 1621 aa11.33□□□□□ -0.6
FMOD-201ENST00000354955 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
FMOD-201ENST00000354955 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.6
FMOD-201ENST00000354955 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
FMOD-201ENST00000354955 MYOM3Q5VTT5 1437 aa11.33□□□□□ -0.6
FMOD-201ENST00000354955 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
FMOD-201ENST00000354955 PANK3Q9H999 370 aa11.33□□□□□ -0.6
FMOD-201ENST00000354955 CADPSQ9ULU8 1353 aa11.32□□□□□ -0.6
FMOD-201ENST00000354955 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
FMOD-201ENST00000354955 RRP7AQ9Y3A4 280 aaKnown RBP11.32□□□□□ -0.6
FMOD-201ENST00000354955 NUP155O75694 1391 aa11.31□□□□□ -0.6
FMOD-201ENST00000354955 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
FMOD-201ENST00000354955 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
FMOD-201ENST00000354955 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
FMOD-201ENST00000354955 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
FMOD-201ENST00000354955 NCOA1Q15788 1441 aa11.29□□□□□ -0.6
FMOD-201ENST00000354955 CASKIN1Q8WXD9 1431 aa11.29□□□□□ -0.6
FMOD-201ENST00000354955 BCAR3O75815 825 aa11.29□□□□□ -0.6
FMOD-201ENST00000354955 TSPY4P0CV99 314 aa11.29□□□□□ -0.6
FMOD-201ENST00000354955 TSPY10P0CW01 314 aa11.29□□□□□ -0.6
FMOD-201ENST00000354955 SMG6Q86US8 1419 aaKnown RBP11.28□□□□□ -0.6
FMOD-201ENST00000354955 ROCK2O75116 1388 aaKnown RBP11.28□□□□□ -0.6
FMOD-201ENST00000354955 ARID3AQ99856 593 aa11.28□□□□□ -0.6
FMOD-201ENST00000354955 UBE2Q2Q8WVN8 375 aa11.27□□□□□ -0.6
FMOD-201ENST00000354955 POGKQ9P215 609 aa11.27□□□□□ -0.61
FMOD-201ENST00000354955 CDK13Q14004 1512 aaKnown RBP11.27□□□□□ -0.61
FMOD-201ENST00000354955 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
FMOD-201ENST00000354955 PTPN23Q9H3S7 1636 aa11.26□□□□□ -0.61
FMOD-201ENST00000354955 KDM6BO15054 1643 aa11.26□□□□□ -0.61
FMOD-201ENST00000354955 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
FMOD-201ENST00000354955 COG6Q9Y2V7 657 aa11.26□□□□□ -0.61
FMOD-201ENST00000354955 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
FMOD-201ENST00000354955 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
FMOD-201ENST00000354955 PANK1Q8TE04 598 aa11.25□□□□□ -0.61
FMOD-201ENST00000354955 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
FMOD-201ENST00000354955 ANKRD30BQ9BXX2 1392 aa11.24□□□□□ -0.61
FMOD-201ENST00000354955 APAF1O14727 1248 aa11.24□□□□□ -0.61
FMOD-201ENST00000354955 NAP1L5Q96NT1 182 aaPredicted RBP11.24□□□□□ -0.61
FMOD-201ENST00000354955 TPRNQ4KMQ1 711 aa11.24□□□□□ -0.61
FMOD-201ENST00000354955 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
FMOD-201ENST00000354955 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
FMOD-201ENST00000354955 SEC24BO95487 1268 aa11.23□□□□□ -0.61
FMOD-201ENST00000354955 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
FMOD-201ENST00000354955 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
FMOD-201ENST00000354955 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
FMOD-201ENST00000354955 PEG3Q9GZU2 1588 aa11.22□□□□□ -0.61
FMOD-201ENST00000354955 FYCO1Q9BQS8 1478 aa11.21□□□□□ -0.61
FMOD-201ENST00000354955 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
FMOD-201ENST00000354955 KIF15Q9NS87 1388 aa11.2□□□□□ -0.62
FMOD-201ENST00000354955 RALBP1Q15311 655 aa11.2□□□□□ -0.62
FMOD-201ENST00000354955 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
FMOD-201ENST00000354955 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
FMOD-201ENST00000354955 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
FMOD-201ENST00000354955 TNNQ9UQP3 1299 aa11.19□□□□□ -0.62
FMOD-201ENST00000354955 DENND4BO75064 1496 aaPredicted RBP11.19□□□□□ -0.62
FMOD-201ENST00000354955 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
FMOD-201ENST00000354955 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
FMOD-201ENST00000354955 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
FMOD-201ENST00000354955 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
FMOD-201ENST00000354955 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
FMOD-201ENST00000354955 IGHDP01880 384 aa11.17□□□□□ -0.62
FMOD-201ENST00000354955 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
FMOD-201ENST00000354955 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
FMOD-201ENST00000354955 PRG4Q92954 1404 aaPredicted RBP11.17□□□□□ -0.62
FMOD-201ENST00000354955 MFAP1P55081 439 aaKnown RBP11.16□□□□□ -0.62
FMOD-201ENST00000354955 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
FMOD-201ENST00000354955 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms