RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 GCC2Q8IWJ2 1684 aa27.08■■□□□ 1.93
TRIM41-202ENST00000351937 CDC42BPAQ5VT25 1732 aa27.07■■□□□ 1.92
TRIM41-202ENST00000351937 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
TRIM41-202ENST00000351937 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
TRIM41-202ENST00000351937 KDM5BQ9UGL1 1544 aa27.02■■□□□ 1.92
TRIM41-202ENST00000351937 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
TRIM41-202ENST00000351937 ACIN1Q9UKV3 1341 aaKnown RBP26.99■■□□□ 1.91
TRIM41-202ENST00000351937 ZCCHC11Q5TAX3 1644 aaKnown RBP26.98■■□□□ 1.91
TRIM41-202ENST00000351937 ZNF316A6NFI3 1004 aaPredicted RBP26.94■■□□□ 1.9
TRIM41-202ENST00000351937 PREX2Q70Z35 1606 aa26.94■■□□□ 1.9
TRIM41-202ENST00000351937 CROCC2H7BZ55 1655 aa26.93■■□□□ 1.9
TRIM41-202ENST00000351937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.93■■□□□ 1.9
TRIM41-202ENST00000351937 ADGRL2O95490 1459 aa26.92■■□□□ 1.9
TRIM41-202ENST00000351937 KDM6BO15054 1643 aa26.91■■□□□ 1.9
TRIM41-202ENST00000351937 TIMELESSQ9UNS1 1208 aa26.9■■□□□ 1.9
TRIM41-202ENST00000351937 ADGBQ8N7X0 1667 aa26.9■■□□□ 1.9
TRIM41-202ENST00000351937 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
TRIM41-202ENST00000351937 CDC42BPBQ9Y5S2 1711 aa26.89■■□□□ 1.9
TRIM41-202ENST00000351937 TTC37Q6PGP7 1564 aa26.89■■□□□ 1.9
TRIM41-202ENST00000351937 SHANK2Q9UPX8 1470 aa26.88■■□□□ 1.89
TRIM41-202ENST00000351937 SIN3AQ96ST3 1273 aa26.87■■□□□ 1.89
TRIM41-202ENST00000351937 ARHGEF5Q12774 1597 aa26.86■■□□□ 1.89
TRIM41-202ENST00000351937 ANKRD30AQ9BXX3 1397 aa26.85■■□□□ 1.89
TRIM41-202ENST00000351937 TRIM52Q96A61 297 aa26.85■■□□□ 1.89
TRIM41-202ENST00000351937 KCNH8Q96L42 1107 aa26.84■■□□□ 1.89
TRIM41-202ENST00000351937 SAMD9LQ8IVG5 1584 aa26.84■■□□□ 1.89
TRIM41-202ENST00000351937 RSPH4AQ5TD94 716 aa26.83■■□□□ 1.89
TRIM41-202ENST00000351937 MBD5Q9P267 1494 aa26.83■■□□□ 1.89
TRIM41-202ENST00000351937 NEUROD1Q13562 356 aa26.83■■□□□ 1.89
TRIM41-202ENST00000351937 MYO5CQ9NQX4 1742 aa26.83■■□□□ 1.89
TRIM41-202ENST00000351937 ARHGAP5Q13017 1502 aa26.82■■□□□ 1.88
TRIM41-202ENST00000351937 TSPY4P0CV99 314 aa26.82■■□□□ 1.88
TRIM41-202ENST00000351937 TSPY10P0CW01 314 aa26.82■■□□□ 1.88
TRIM41-202ENST00000351937 C9orf84Q5VXU9 1444 aa26.81■■□□□ 1.88
TRIM41-202ENST00000351937 HNRNPMP52272 730 aaKnown RBP eCLIP26.8■■□□□ 1.88
TRIM41-202ENST00000351937 PLCH2O75038 1416 aa26.78■■□□□ 1.88
TRIM41-202ENST00000351937 MPHOSPH9Q99550 1183 aa26.78■■□□□ 1.88
TRIM41-202ENST00000351937 CCDC141Q6ZP82 1450 aa26.78■■□□□ 1.88
TRIM41-202ENST00000351937 PLEKHH2Q8IVE3 1493 aa26.77■■□□□ 1.88
TRIM41-202ENST00000351937 DENND4BO75064 1496 aaPredicted RBP26.76■■□□□ 1.88
TRIM41-202ENST00000351937 WDR7Q9Y4E6 1490 aa26.76■■□□□ 1.87
TRIM41-202ENST00000351937 KIAA1107Q9UPP5 1409 aa26.75■■□□□ 1.87
TRIM41-202ENST00000351937 DIEXFQ68CQ4 756 aaKnown RBP26.75■■□□□ 1.87
TRIM41-202ENST00000351937 SYCP2Q9BX26 1530 aa26.72■■□□□ 1.87
TRIM41-202ENST00000351937 ANKRD50Q9ULJ7 1429 aa26.71■■□□□ 1.87
TRIM41-202ENST00000351937 EFCAB2Q5VUJ9 269 aa26.71■■□□□ 1.87
TRIM41-202ENST00000351937 ARAP3Q8WWN8 1544 aa26.69■■□□□ 1.86
TRIM41-202ENST00000351937 TONSLQ96HA7 1378 aa26.68■■□□□ 1.86
TRIM41-202ENST00000351937 MAST1Q9Y2H9 1570 aa26.67■■□□□ 1.86
TRIM41-202ENST00000351937 KIF15Q9NS87 1388 aa26.66■■□□□ 1.86
TRIM41-202ENST00000351937 PPP1R15AO75807 674 aaPredicted RBP26.65■■□□□ 1.86
TRIM41-202ENST00000351937 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
TRIM41-202ENST00000351937 ASXL2Q76L83 1435 aa26.65■■□□□ 1.86
TRIM41-202ENST00000351937 SLC4A1APQ9BWU0 796 aaKnown RBP26.64■■□□□ 1.86
TRIM41-202ENST00000351937 PZPP20742 1482 aa26.62■■□□□ 1.85
TRIM41-202ENST00000351937 ABCA9Q8IUA7 1624 aa26.62■■□□□ 1.85
TRIM41-202ENST00000351937 ARHGEF12Q9NZN5 1544 aa26.61■■□□□ 1.85
TRIM41-202ENST00000351937 ABCC1P33527 1531 aa26.6■■□□□ 1.85
TRIM41-202ENST00000351937 ANKRD30BQ9BXX2 1392 aa26.59■■□□□ 1.85
TRIM41-202ENST00000351937 FOXD1Q16676 465 aa26.56■■□□□ 1.84
TRIM41-202ENST00000351937 PLXNC1O60486 1568 aa26.55■■□□□ 1.84
TRIM41-202ENST00000351937 KDM5DQ9BY66 1539 aa26.54■■□□□ 1.84
TRIM41-202ENST00000351937 NUP155O75694 1391 aa26.52■■□□□ 1.84
TRIM41-202ENST00000351937 FANCAO15360 1455 aa26.51■■□□□ 1.83
TRIM41-202ENST00000351937 RPRD2Q5VT52 1461 aaKnown RBP26.5■■□□□ 1.83
TRIM41-202ENST00000351937 TRAPPC8Q9Y2L5 1435 aa26.5■■□□□ 1.83
TRIM41-202ENST00000351937 PKD2Q13563 968 aa26.47■■□□□ 1.83
TRIM41-202ENST00000351937 DUOX2Q9NRD8 1548 aa26.46■■□□□ 1.83
TRIM41-202ENST00000351937 RTEL1-TNFRSF6BF6WH68 1400 aa26.45■■□□□ 1.83
TRIM41-202ENST00000351937 ERBINQ96RT1 1412 aa26.42■■□□□ 1.82
TRIM41-202ENST00000351937 SPAG9O60271 1321 aaKnown RBP26.42■■□□□ 1.82
TRIM41-202ENST00000351937 UNC13BO14795 1591 aa26.4■■□□□ 1.82
TRIM41-202ENST00000351937 ADGRL1O94910 1474 aa26.4■■□□□ 1.82
TRIM41-202ENST00000351937 AFAP1Q8N556 730 aa26.4■■□□□ 1.82
TRIM41-202ENST00000351937 PELP1Q8IZL8 1130 aaKnown RBP26.4■■□□□ 1.82
TRIM41-202ENST00000351937 L3MBTL2Q969R5 705 aa26.39■■□□□ 1.82
TRIM41-202ENST00000351937 FAM135AQ9P2D6 1515 aa26.38■■□□□ 1.81
TRIM41-202ENST00000351937 ZFYVE16Q7Z3T8 1539 aa26.37■■□□□ 1.81
TRIM41-202ENST00000351937 SCAPERQ9BY12 1400 aa26.37■■□□□ 1.81
TRIM41-202ENST00000351937 CD109Q6YHK3 1445 aa26.37■■□□□ 1.81
TRIM41-202ENST00000351937 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
TRIM41-202ENST00000351937 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
TRIM41-202ENST00000351937 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
TRIM41-202ENST00000351937 TEX14Q8IWB6 1497 aa26.35■■□□□ 1.81
TRIM41-202ENST00000351937 CYB5RLQ6IPT4 315 aa26.35■■□□□ 1.81
TRIM41-202ENST00000351937 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
TRIM41-202ENST00000351937 CFAP74Q9C0B2 1584 aa26.33■■□□□ 1.81
TRIM41-202ENST00000351937 MAGI2Q86UL8 1455 aa26.32■■□□□ 1.8
TRIM41-202ENST00000351937 INO80Q9ULG1 1556 aaPredicted RBP26.31■■□□□ 1.8
TRIM41-202ENST00000351937 ATP7AQ04656 1500 aa26.3■■□□□ 1.8
TRIM41-202ENST00000351937 IQGAP3Q86VI3 1631 aa26.3■■□□□ 1.8
TRIM41-202ENST00000351937 MIER1Q8N108 512 aa26.27■■□□□ 1.8
TRIM41-202ENST00000351937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.27■■□□□ 1.86e-9■■■■□ 23.1
TRIM41-202ENST00000351937 ZNF518AQ6AHZ1 1483 aa26.26■■□□□ 1.79
TRIM41-202ENST00000351937 NEO1Q92859 1461 aa26.21■■□□□ 1.79
TRIM41-202ENST00000351937 MYT1LQ9UL68 1186 aa26.2■■□□□ 1.78
TRIM41-202ENST00000351937 POGZQ7Z3K3 1410 aa26.19■■□□□ 1.78
TRIM41-202ENST00000351937 DHX29Q7Z478 1369 aaKnown RBP26.19■■□□□ 1.78
TRIM41-202ENST00000351937 NBPF8Q3BBV2 869 aa26.18■■□□□ 1.78
TRIM41-202ENST00000351937 GLI2P10070 1586 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms