RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ABCC5O15440 1437 aa23.45■■□□□ 1.34
PDAP1-201ENST00000350498 DAPK1P53355 1430 aa23.45■■□□□ 1.34
PDAP1-201ENST00000350498 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
PDAP1-201ENST00000350498 L3MBTL2Q969R5 705 aa23.42■■□□□ 1.34
PDAP1-201ENST00000350498 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
PDAP1-201ENST00000350498 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.34
PDAP1-201ENST00000350498 FKBP8Q14318 412 aa23.39■■□□□ 1.34
PDAP1-201ENST00000350498 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.33
PDAP1-201ENST00000350498 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
PDAP1-201ENST00000350498 ANP32CO43423 234 aa23.37■■□□□ 1.33
PDAP1-201ENST00000350498 KIF14Q15058 1648 aa23.37■■□□□ 1.33
PDAP1-201ENST00000350498 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
PDAP1-201ENST00000350498 AKNAQ7Z591 1439 aa23.35■■□□□ 1.33
PDAP1-201ENST00000350498 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
PDAP1-201ENST00000350498 DNMT1P26358 1616 aaKnown RBP23.34■■□□□ 1.33
PDAP1-201ENST00000350498 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.33
PDAP1-201ENST00000350498 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.33
PDAP1-201ENST00000350498 MYT1Q01538 1121 aa23.33■■□□□ 1.33
PDAP1-201ENST00000350498 NBPF8Q3BBV2 869 aa23.33■■□□□ 1.33
PDAP1-201ENST00000350498 C11orf95C9JLR9 678 aaPredicted RBP23.32■■□□□ 1.32
PDAP1-201ENST00000350498 GPATCH8Q9UKJ3 1502 aaKnown RBP23.31■■□□□ 1.32
PDAP1-201ENST00000350498 CAMSAP2Q08AD1 1489 aa23.3■■□□□ 1.32
PDAP1-201ENST00000350498 ANKRD30BQ9BXX2 1392 aa23.29■■□□□ 1.32
PDAP1-201ENST00000350498 NUP160Q12769 1436 aa23.29■■□□□ 1.32
PDAP1-201ENST00000350498 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
PDAP1-201ENST00000350498 CARMIL2Q6F5E8 1435 aa23.25■■□□□ 1.31
PDAP1-201ENST00000350498 CCER2I3L3R5 266 aa23.23■■□□□ 1.31
PDAP1-201ENST00000350498 EIF4G2P78344 907 aaKnown RBP eCLIP23.23■■□□□ 1.31
PDAP1-201ENST00000350498 NCOA1Q15788 1441 aa23.22■■□□□ 1.31
PDAP1-201ENST00000350498 ATP10BO94823 1461 aa23.21■■□□□ 1.31
PDAP1-201ENST00000350498 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
PDAP1-201ENST00000350498 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
PDAP1-201ENST00000350498 PZPP20742 1482 aa23.2■■□□□ 1.3
PDAP1-201ENST00000350498 RPRD2Q5VT52 1461 aaKnown RBP23.19■■□□□ 1.3
PDAP1-201ENST00000350498 ZNF326Q5BKZ1 582 aaKnown RBP23.18■■□□□ 1.3
PDAP1-201ENST00000350498 HNRNPMP52272 730 aaKnown RBP eCLIP23.17■■□□□ 1.3
PDAP1-201ENST00000350498 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
PDAP1-201ENST00000350498 PKD2Q13563 968 aa23.16■■□□□ 1.3
PDAP1-201ENST00000350498 ABCA8O94911 1581 aa23.14■■□□□ 1.29
PDAP1-201ENST00000350498 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.29
PDAP1-201ENST00000350498 ITSN2Q9NZM3 1697 aa23.13■■□□□ 1.29
PDAP1-201ENST00000350498 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
PDAP1-201ENST00000350498 ADCY10Q96PN6 1610 aa23.12■■□□□ 1.29
PDAP1-201ENST00000350498 ABCC10Q5T3U5 1492 aa23.1■■□□□ 1.29
PDAP1-201ENST00000350498 NEFLP07196 543 aa23.09■■□□□ 1.29
PDAP1-201ENST00000350498 PTPRGP23470 1445 aa23.08■■□□□ 1.28
PDAP1-201ENST00000350498 IRX6P78412 446 aaPredicted RBP23.08■■□□□ 1.28
PDAP1-201ENST00000350498 ANKRD50Q9ULJ7 1429 aa23.07■■□□□ 1.28
PDAP1-201ENST00000350498 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
PDAP1-201ENST00000350498 CCDC7Q96M83 1385 aa23.07■■□□□ 1.28
PDAP1-201ENST00000350498 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
PDAP1-201ENST00000350498 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
PDAP1-201ENST00000350498 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
PDAP1-201ENST00000350498 POLR3GLQ9BT43 218 aa23.05■■□□□ 1.28
PDAP1-201ENST00000350498 NUP155O75694 1391 aa23.04■■□□□ 1.28
PDAP1-201ENST00000350498 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
PDAP1-201ENST00000350498 ADGRL2O95490 1459 aa23.04■■□□□ 1.28
PDAP1-201ENST00000350498 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
PDAP1-201ENST00000350498 KIAA1107Q9UPP5 1409 aa23.03■■□□□ 1.28
PDAP1-201ENST00000350498 CNTLNQ9NXG0 1405 aa23.02■■□□□ 1.28
PDAP1-201ENST00000350498 SPATA31E1Q6ZUB1 1445 aa23.01■■□□□ 1.27
PDAP1-201ENST00000350498 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
PDAP1-201ENST00000350498 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
PDAP1-201ENST00000350498 ERCC6L2Q5T890 1561 aa23■■□□□ 1.27
PDAP1-201ENST00000350498 KDM2AQ9Y2K7 1162 aa23■■□□□ 1.27
PDAP1-201ENST00000350498 CHD1O14646 1710 aa22.99■■□□□ 1.27
PDAP1-201ENST00000350498 ANP32EQ9BTT0 268 aa22.98■■□□□ 1.27
PDAP1-201ENST00000350498 PRKRIP1Q9H875 184 aaPredicted RBP22.98■■□□□ 1.27
PDAP1-201ENST00000350498 RBM19Q9Y4C8 960 aaKnown RBP22.98■■□□□ 1.27
PDAP1-201ENST00000350498 FAM9BQ8IZU0 186 aa22.98■■□□□ 1.27
PDAP1-201ENST00000350498 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
PDAP1-201ENST00000350498 SENP3-EIF4A1A0A087X0R7 540 aa22.95■■□□□ 1.26
PDAP1-201ENST00000350498 MBD5Q9P267 1494 aa22.94■■□□□ 1.26
PDAP1-201ENST00000350498 CDC42BPBQ9Y5S2 1711 aa22.92■■□□□ 1.26
PDAP1-201ENST00000350498 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
PDAP1-201ENST00000350498 BCORL1Q5H9F3 1711 aa22.91■■□□□ 1.26
PDAP1-201ENST00000350498 USP47Q96K76 1375 aa22.91■■□□□ 1.26
PDAP1-201ENST00000350498 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
PDAP1-201ENST00000350498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.262e-16■■■□□ 18.3
PDAP1-201ENST00000350498 DCAF11Q8TEB1 546 aa22.88■■□□□ 1.25
PDAP1-201ENST00000350498 SHANK2Q9UPX8 1470 aa22.86■■□□□ 1.25
PDAP1-201ENST00000350498 TTC37Q6PGP7 1564 aa22.86■■□□□ 1.25
PDAP1-201ENST00000350498 RGL3Q3MIN7 710 aa22.84■■□□□ 1.25
PDAP1-201ENST00000350498 SYCP2Q9BX26 1530 aa22.84■■□□□ 1.25
PDAP1-201ENST00000350498 CARD11Q9BXL7 1154 aa22.83■■□□□ 1.25
PDAP1-201ENST00000350498 CCDC141Q6ZP82 1450 aa22.81■■□□□ 1.24
PDAP1-201ENST00000350498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.81■■□□□ 1.243e-7■■□□□ 12.7
PDAP1-201ENST00000350498 PREX2Q70Z35 1606 aa22.81■■□□□ 1.24
PDAP1-201ENST00000350498 ARHGAP5Q13017 1502 aa22.81■■□□□ 1.24
PDAP1-201ENST00000350498 ST20-MTHFSA0A0A6YYL1 179 aa22.8■■□□□ 1.24
PDAP1-201ENST00000350498 DHX29Q7Z478 1369 aaKnown RBP22.79■■□□□ 1.24
PDAP1-201ENST00000350498 ARHGEF5Q12774 1597 aa22.79■■□□□ 1.24
PDAP1-201ENST00000350498 KDM5CP41229 1560 aa22.78■■□□□ 1.24
PDAP1-201ENST00000350498 POLR1AO95602 1720 aaPredicted RBP22.76■■□□□ 1.23
PDAP1-201ENST00000350498 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
PDAP1-201ENST00000350498 SHROOM2Q13796 1616 aa22.76■■□□□ 1.23
PDAP1-201ENST00000350498 MSH5O43196 834 aa22.75■■□□□ 1.23
PDAP1-201ENST00000350498 ARHGEF12Q9NZN5 1544 aa22.75■■□□□ 1.23
PDAP1-201ENST00000350498 KDM5DQ9BY66 1539 aa22.74■■□□□ 1.23
PDAP1-201ENST00000350498 NBPF1Q3BBV0 1214 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms