RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 FMN1Q68DA7 1419 aa21.28■■□□□ 1
LRP8-202ENST00000347547 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
LRP8-202ENST00000347547 CCDC7Q96M83 1385 aa21.27■□□□□ 0.99
LRP8-202ENST00000347547 MRS2Q9HD23 443 aa21.26■□□□□ 0.99
LRP8-202ENST00000347547 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
LRP8-202ENST00000347547 FHOD3Q2V2M9 1422 aa21.26■□□□□ 0.99
LRP8-202ENST00000347547 IQGAP2Q13576 1575 aa21.25■□□□□ 0.99
LRP8-202ENST00000347547 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
LRP8-202ENST00000347547 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
LRP8-202ENST00000347547 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
LRP8-202ENST00000347547 SALL2Q9Y467 1007 aaPredicted RBP21.2■□□□□ 0.98
LRP8-202ENST00000347547 SYNJ2O15056 1496 aa21.18■□□□□ 0.98
LRP8-202ENST00000347547 DENND4BO75064 1496 aaPredicted RBP21.18■□□□□ 0.98
LRP8-202ENST00000347547 CCDC136Q96JN2 1154 aa21.18■□□□□ 0.98
LRP8-202ENST00000347547 USP35Q9P2H5 1018 aa21.18■□□□□ 0.98
LRP8-202ENST00000347547 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
LRP8-202ENST00000347547 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
LRP8-202ENST00000347547 POLR1AO95602 1720 aaPredicted RBP21.18■□□□□ 0.98
LRP8-202ENST00000347547 UGGT2Q9NYU1 1516 aa21.17■□□□□ 0.98
LRP8-202ENST00000347547 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
LRP8-202ENST00000347547 GCC2Q8IWJ2 1684 aa21.16■□□□□ 0.98
LRP8-202ENST00000347547 LRRIQ1Q96JM4 1722 aa21.15■□□□□ 0.98
LRP8-202ENST00000347547 C11orf95C9JLR9 678 aaPredicted RBP21.15■□□□□ 0.98
LRP8-202ENST00000347547 CEP170Q5SW79 1584 aa21.15■□□□□ 0.98
LRP8-202ENST00000347547 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.98
LRP8-202ENST00000347547 MTUS2Q5JR59 1369 aa21.13■□□□□ 0.97
LRP8-202ENST00000347547 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
LRP8-202ENST00000347547 SPATA31E1Q6ZUB1 1445 aa21.11■□□□□ 0.97
LRP8-202ENST00000347547 WASHC2CQ9Y4E1 1318 aa21.1■□□□□ 0.97
LRP8-202ENST00000347547 NUP160Q12769 1436 aa21.09■□□□□ 0.97
LRP8-202ENST00000347547 SUPT6HQ7KZ85 1726 aaKnown RBP21.08■□□□□ 0.96
LRP8-202ENST00000347547 TCOF1Q13428 1488 aaKnown RBP21.07■□□□□ 0.96
LRP8-202ENST00000347547 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
LRP8-202ENST00000347547 EHBP1L1Q8N3D4 1523 aa21.07■□□□□ 0.96
LRP8-202ENST00000347547 KIAA0556O60303 1618 aa21.06■□□□□ 0.96
LRP8-202ENST00000347547 DISP1Q96F81 1524 aa21.06■□□□□ 0.96
LRP8-202ENST00000347547 KIF7Q2M1P5 1343 aa21.06■□□□□ 0.96
LRP8-202ENST00000347547 L3MBTL2Q969R5 705 aa21.05■□□□□ 0.96
LRP8-202ENST00000347547 TCERG1O14776 1098 aaKnown RBP21.03■□□□□ 0.96
LRP8-202ENST00000347547 DHX29Q7Z478 1369 aaKnown RBP21.03■□□□□ 0.96
LRP8-202ENST00000347547 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
LRP8-202ENST00000347547 PPM1GO15355 546 aaPredicted RBP21.01■□□□□ 0.95
LRP8-202ENST00000347547 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
LRP8-202ENST00000347547 CHD1O14646 1710 aa21.01■□□□□ 0.95
LRP8-202ENST00000347547 MIA2Q96PC5 1412 aa21■□□□□ 0.95
LRP8-202ENST00000347547 NEFMP07197 916 aa20.99■□□□□ 0.95
LRP8-202ENST00000347547 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
LRP8-202ENST00000347547 MS4A1P11836 297 aa20.98■□□□□ 0.95
LRP8-202ENST00000347547 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
LRP8-202ENST00000347547 KDM6BO15054 1643 aa20.97■□□□□ 0.95
LRP8-202ENST00000347547 NBPF8Q3BBV2 869 aa20.96■□□□□ 0.95
LRP8-202ENST00000347547 UBE2Q2Q8WVN8 375 aa20.95■□□□□ 0.94
LRP8-202ENST00000347547 ANKRD30BQ9BXX2 1392 aa20.95■□□□□ 0.94
LRP8-202ENST00000347547 RRP7BPQ9NSQ0 103 aa20.94■□□□□ 0.94
LRP8-202ENST00000347547 BACH2Q9BYV9 841 aa20.93■□□□□ 0.94
LRP8-202ENST00000347547 RTN4Q9NQC3 1192 aaKnown RBP20.93■□□□□ 0.94
LRP8-202ENST00000347547 PDE4AP27815 886 aa20.93■□□□□ 0.94
LRP8-202ENST00000347547 ARID4BQ4LE39 1312 aaPredicted RBP20.92■□□□□ 0.94
LRP8-202ENST00000347547 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
LRP8-202ENST00000347547 MAGI3Q5TCQ9 1506 aa20.9■□□□□ 0.94
LRP8-202ENST00000347547 LAS1LQ9Y4W2 734 aaKnown RBP20.89■□□□□ 0.94
LRP8-202ENST00000347547 RRP1P56182 461 aaKnown RBP20.89■□□□□ 0.93
LRP8-202ENST00000347547 LRPPRCP42704 1394 aaKnown RBP20.88■□□□□ 0.93
LRP8-202ENST00000347547 NPM2Q86SE8 214 aaKnown RBP20.87■□□□□ 0.93
LRP8-202ENST00000347547 EPRSP07814 1512 aaKnown RBP20.87■□□□□ 0.93
LRP8-202ENST00000347547 RAPGEF6Q8TEU7 1601 aa20.86■□□□□ 0.93
LRP8-202ENST00000347547 FBLN2P98095 1184 aa20.86■□□□□ 0.93
LRP8-202ENST00000347547 DDRGK1Q96HY6 314 aa20.86■□□□□ 0.93
LRP8-202ENST00000347547 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
LRP8-202ENST00000347547 ROCK1Q13464 1354 aa20.84■□□□□ 0.93
LRP8-202ENST00000347547 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
LRP8-202ENST00000347547 CHIC2Q9UKJ5 165 aa20.83■□□□□ 0.93
LRP8-202ENST00000347547 GSE1Q14687 1217 aa20.83■□□□□ 0.93
LRP8-202ENST00000347547 ROCK2O75116 1388 aaKnown RBP20.83■□□□□ 0.92
LRP8-202ENST00000347547 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.82■□□□□ 0.92
LRP8-202ENST00000347547 NUP153P49790 1475 aaKnown RBP20.82■□□□□ 0.92
LRP8-202ENST00000347547 CDK13Q14004 1512 aaKnown RBP20.82■□□□□ 0.92
LRP8-202ENST00000347547 BCORL1Q5H9F3 1711 aa20.82■□□□□ 0.92
LRP8-202ENST00000347547 EXOC6Q8TAG9 804 aa20.82■□□□□ 0.92
LRP8-202ENST00000347547 KTN1Q86UP2 1357 aaKnown RBP20.81■□□□□ 0.92
LRP8-202ENST00000347547 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
LRP8-202ENST00000347547 BRD4O60885 1362 aaPredicted RBP20.79■□□□□ 0.92
LRP8-202ENST00000347547 FOXD1Q16676 465 aa20.78■□□□□ 0.92
LRP8-202ENST00000347547 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
LRP8-202ENST00000347547 CARMIL2Q6F5E8 1435 aa20.77■□□□□ 0.92
LRP8-202ENST00000347547 RCAN3Q9UKA8 241 aa20.77■□□□□ 0.92
LRP8-202ENST00000347547 BRPF3Q9ULD4 1205 aa20.77■□□□□ 0.92
LRP8-202ENST00000347547 USP47Q96K76 1375 aa20.77■□□□□ 0.92
LRP8-202ENST00000347547 KDM5CP41229 1560 aa20.76■□□□□ 0.91
LRP8-202ENST00000347547 PDE3BQ13370 1112 aa20.76■□□□□ 0.91
LRP8-202ENST00000347547 ABCA8O94911 1581 aa20.76■□□□□ 0.91
LRP8-202ENST00000347547 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
LRP8-202ENST00000347547 KIF14Q15058 1648 aa20.75■□□□□ 0.91
LRP8-202ENST00000347547 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
LRP8-202ENST00000347547 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
LRP8-202ENST00000347547 NFKBIBQ15653 356 aa20.72■□□□□ 0.91
LRP8-202ENST00000347547 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
LRP8-202ENST00000347547 DAPK1P53355 1430 aa20.71■□□□□ 0.91
LRP8-202ENST00000347547 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
LRP8-202ENST00000347547 RALBP1Q15311 655 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms