RNA–Protein interactions for RNA: ENST00000345523.9

C19orf48-201, Transcript of chromosome 19 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf48, Length 1,503 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-201ENST00000345523 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
C19orf48-201ENST00000345523 ABCC5O15440 1437 aa22.56■■□□□ 1.2
C19orf48-201ENST00000345523 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
C19orf48-201ENST00000345523 ANP32CO43423 234 aa22.53■■□□□ 1.2
C19orf48-201ENST00000345523 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
C19orf48-201ENST00000345523 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
C19orf48-201ENST00000345523 PRG4Q92954 1404 aaPredicted RBP22.51■■□□□ 1.19
C19orf48-201ENST00000345523 CFDP1Q9UEE9 299 aaPredicted RBP22.51■■□□□ 1.19
C19orf48-201ENST00000345523 ADGRL2O95490 1459 aa22.5■■□□□ 1.19
C19orf48-201ENST00000345523 KDM5BQ9UGL1 1544 aa22.48■■□□□ 1.19
C19orf48-201ENST00000345523 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
C19orf48-201ENST00000345523 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
C19orf48-201ENST00000345523 ABCA8O94911 1581 aa22.47■■□□□ 1.19
C19orf48-201ENST00000345523 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
C19orf48-201ENST00000345523 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
C19orf48-201ENST00000345523 DENND4BO75064 1496 aaPredicted RBP22.45■■□□□ 1.19
C19orf48-201ENST00000345523 PLB1Q6P1J6 1458 aa22.45■■□□□ 1.19
C19orf48-201ENST00000345523 ANKRD30BQ9BXX2 1392 aa22.44■■□□□ 1.18
C19orf48-201ENST00000345523 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
C19orf48-201ENST00000345523 RPRD2Q5VT52 1461 aaKnown RBP22.44■■□□□ 1.18
C19orf48-201ENST00000345523 SHANK2Q9UPX8 1470 aa22.44■■□□□ 1.18
C19orf48-201ENST00000345523 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
C19orf48-201ENST00000345523 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
C19orf48-201ENST00000345523 ADGBQ8N7X0 1667 aa22.41■■□□□ 1.18
C19orf48-201ENST00000345523 KIF14Q15058 1648 aa22.4■■□□□ 1.18
C19orf48-201ENST00000345523 ARID3CA6NKF2 412 aa22.39■■□□□ 1.17
C19orf48-201ENST00000345523 KDM6BO15054 1643 aa22.39■■□□□ 1.17
C19orf48-201ENST00000345523 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
C19orf48-201ENST00000345523 RSPH4AQ5TD94 716 aa22.38■■□□□ 1.17
C19orf48-201ENST00000345523 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
C19orf48-201ENST00000345523 ABCC10Q5T3U5 1492 aa22.35■■□□□ 1.17
C19orf48-201ENST00000345523 ATP10BO94823 1461 aa22.35■■□□□ 1.17
C19orf48-201ENST00000345523 PTPRGP23470 1445 aa22.34■■□□□ 1.17
C19orf48-201ENST00000345523 CROCC2H7BZ55 1655 aa22.34■■□□□ 1.17
C19orf48-201ENST00000345523 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
C19orf48-201ENST00000345523 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.17
C19orf48-201ENST00000345523 KIAA1107Q9UPP5 1409 aa22.31■■□□□ 1.16
C19orf48-201ENST00000345523 HSPA5P11021 654 aaKnown RBP22.3■■□□□ 1.16
C19orf48-201ENST00000345523 PZPP20742 1482 aa22.3■■□□□ 1.16
C19orf48-201ENST00000345523 TEX14Q8IWB6 1497 aa22.3■■□□□ 1.16
C19orf48-201ENST00000345523 ARHGEF5Q12774 1597 aa22.29■■□□□ 1.16
C19orf48-201ENST00000345523 TSPY4P0CV99 314 aa22.29■■□□□ 1.16
C19orf48-201ENST00000345523 TSPY10P0CW01 314 aa22.29■■□□□ 1.16
C19orf48-201ENST00000345523 ANKRD50Q9ULJ7 1429 aa22.28■■□□□ 1.16
C19orf48-201ENST00000345523 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
C19orf48-201ENST00000345523 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
C19orf48-201ENST00000345523 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
C19orf48-201ENST00000345523 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
C19orf48-201ENST00000345523 ZNF777Q9ULD5 760 aaPredicted RBP22.23■■□□□ 1.15
C19orf48-201ENST00000345523 ARID4BQ4LE39 1312 aaPredicted RBP22.23■■□□□ 1.15
C19orf48-201ENST00000345523 CNTLNQ9NXG0 1405 aa22.22■■□□□ 1.15
C19orf48-201ENST00000345523 ABCC2Q92887 1545 aa22.21■■□□□ 1.15
C19orf48-201ENST00000345523 WASHC2AQ641Q2 1341 aa22.21■■□□□ 1.15
C19orf48-201ENST00000345523 CDC42BPAQ5VT25 1732 aa22.21■■□□□ 1.15
C19orf48-201ENST00000345523 PLEKHH2Q8IVE3 1493 aa22.19■■□□□ 1.14
C19orf48-201ENST00000345523 CCDC7Q96M83 1385 aa22.18■■□□□ 1.14
C19orf48-201ENST00000345523 UHRF1BP1LA0JNW5 1464 aa22.17■■□□□ 1.14
C19orf48-201ENST00000345523 CCDC141Q6ZP82 1450 aa22.17■■□□□ 1.14
C19orf48-201ENST00000345523 SPATA31E1Q6ZUB1 1445 aa22.17■■□□□ 1.14
C19orf48-201ENST00000345523 KCNH8Q96L42 1107 aa22.17■■□□□ 1.14
C19orf48-201ENST00000345523 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
C19orf48-201ENST00000345523 MBD5Q9P267 1494 aa22.17■■□□□ 1.14
C19orf48-201ENST00000345523 UHRF1BP1Q6BDS2 1440 aa22.15■■□□□ 1.14
C19orf48-201ENST00000345523 NEFLP07196 543 aa22.15■■□□□ 1.14
C19orf48-201ENST00000345523 PKD2Q13563 968 aa22.15■■□□□ 1.14
C19orf48-201ENST00000345523 FOXD1Q16676 465 aa22.14■■□□□ 1.13
C19orf48-201ENST00000345523 PREX2Q70Z35 1606 aa22.13■■□□□ 1.13
C19orf48-201ENST00000345523 NUP155O75694 1391 aa22.13■■□□□ 1.13
C19orf48-201ENST00000345523 MAST1Q9Y2H9 1570 aa22.12■■□□□ 1.13
C19orf48-201ENST00000345523 KIF15Q9NS87 1388 aa22.12■■□□□ 1.13
C19orf48-201ENST00000345523 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
C19orf48-201ENST00000345523 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
C19orf48-201ENST00000345523 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
C19orf48-201ENST00000345523 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
C19orf48-201ENST00000345523 ZCCHC11Q5TAX3 1644 aaKnown RBP22.08■■□□□ 1.13
C19orf48-201ENST00000345523 ROCK2O75116 1388 aaKnown RBP22.08■■□□□ 1.13
C19orf48-201ENST00000345523 POLR1AO95602 1720 aaPredicted RBP22.06■■□□□ 1.12
C19orf48-201ENST00000345523 RALGAPBQ86X10 1494 aa22.04■■□□□ 1.12
C19orf48-201ENST00000345523 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
C19orf48-201ENST00000345523 PRKRIP1Q9H875 184 aaPredicted RBP22.02■■□□□ 1.12
C19orf48-201ENST00000345523 KIF7Q2M1P5 1343 aa22.01■■□□□ 1.11
C19orf48-201ENST00000345523 HNRNPMP52272 730 aaKnown RBP eCLIP22.01■■□□□ 1.11not detected■■□□□ 14.1
C19orf48-201ENST00000345523 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
C19orf48-201ENST00000345523 USP47Q96K76 1375 aa22■■□□□ 1.11
C19orf48-201ENST00000345523 MYT1Q01538 1121 aa22■■□□□ 1.11
C19orf48-201ENST00000345523 ARHGAP5Q13017 1502 aa21.99■■□□□ 1.11
C19orf48-201ENST00000345523 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
C19orf48-201ENST00000345523 CDC42BPBQ9Y5S2 1711 aa21.99■■□□□ 1.11
C19orf48-201ENST00000345523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.98■■□□□ 1.11not detected■■□□□ 13.5
C19orf48-201ENST00000345523 UNC13BO14795 1591 aa21.96■■□□□ 1.11
C19orf48-201ENST00000345523 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
C19orf48-201ENST00000345523 KTN1Q86UP2 1357 aaKnown RBP21.96■■□□□ 1.11
C19orf48-201ENST00000345523 ARAP3Q8WWN8 1544 aa21.95■■□□□ 1.1
C19orf48-201ENST00000345523 PLCH2O75038 1416 aa21.95■■□□□ 1.1
C19orf48-201ENST00000345523 ERBINQ96RT1 1412 aa21.95■■□□□ 1.1
C19orf48-201ENST00000345523 DUOX2Q9NRD8 1548 aa21.94■■□□□ 1.1
C19orf48-201ENST00000345523 C11orf95C9JLR9 678 aaPredicted RBP21.94■■□□□ 1.1
C19orf48-201ENST00000345523 HNRNPUQ00839 825 aaKnown RBP eCLIP21.94■■□□□ 1.1
C19orf48-201ENST00000345523 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
C19orf48-201ENST00000345523 FKBP8Q14318 412 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms