RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 PLEKHD1A6NEE1 506 aa26.77■■□□□ 1.88
RBM38-202ENST00000344785 PPP1R15AO75807 674 aaPredicted RBP26.77■■□□□ 1.88
RBM38-202ENST00000344785 CAMSAP2Q08AD1 1489 aa26.75■■□□□ 1.87
RBM38-202ENST00000344785 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
RBM38-202ENST00000344785 TRIM52Q96A61 297 aa26.74■■□□□ 1.87
RBM38-202ENST00000344785 ZNF777Q9ULD5 760 aaPredicted RBP26.74■■□□□ 1.87
RBM38-202ENST00000344785 ROCK1Q13464 1354 aa26.73■■□□□ 1.87
RBM38-202ENST00000344785 SHROOM2Q13796 1616 aa26.73■■□□□ 1.87
RBM38-202ENST00000344785 ABCC10Q5T3U5 1492 aa26.71■■□□□ 1.87
RBM38-202ENST00000344785 ITSN2Q9NZM3 1697 aa26.68■■□□□ 1.86
RBM38-202ENST00000344785 MPHOSPH9Q99550 1183 aa26.67■■□□□ 1.86
RBM38-202ENST00000344785 TONSLQ96HA7 1378 aa26.65■■□□□ 1.86
RBM38-202ENST00000344785 FOXD1Q16676 465 aa26.65■■□□□ 1.86
RBM38-202ENST00000344785 CDC42BPAQ5VT25 1732 aa26.65■■□□□ 1.86
RBM38-202ENST00000344785 SCAF1Q9H7N4 1312 aaKnown RBP26.64■■□□□ 1.85
RBM38-202ENST00000344785 ACIN1Q9UKV3 1341 aaKnown RBP26.63■■□□□ 1.85
RBM38-202ENST00000344785 KDM5BQ9UGL1 1544 aa26.62■■□□□ 1.85
RBM38-202ENST00000344785 NCOA1Q15788 1441 aa26.61■■□□□ 1.85
RBM38-202ENST00000344785 YTHDC1Q96MU7 727 aaKnown RBP26.59■■□□□ 1.85
RBM38-202ENST00000344785 HIRIP3Q9BW71 556 aaPredicted RBP26.59■■□□□ 1.85
RBM38-202ENST00000344785 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
RBM38-202ENST00000344785 CROCC2H7BZ55 1655 aa26.54■■□□□ 1.84
RBM38-202ENST00000344785 ADGRL2O95490 1459 aa26.53■■□□□ 1.84
RBM38-202ENST00000344785 HNRNPMP52272 730 aaKnown RBP eCLIP26.5■■□□□ 1.83
RBM38-202ENST00000344785 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
RBM38-202ENST00000344785 CENPBP07199 599 aaPredicted RBP26.5■■□□□ 1.83
RBM38-202ENST00000344785 ANKRD30BQ9BXX2 1392 aa26.49■■□□□ 1.83
RBM38-202ENST00000344785 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
RBM38-202ENST00000344785 SLC4A1APQ9BWU0 796 aaKnown RBP26.47■■□□□ 1.83
RBM38-202ENST00000344785 PZPP20742 1482 aa26.47■■□□□ 1.83
RBM38-202ENST00000344785 ANKRD30AQ9BXX3 1397 aa26.46■■□□□ 1.83
RBM38-202ENST00000344785 CDC42BPBQ9Y5S2 1711 aa26.46■■□□□ 1.83
RBM38-202ENST00000344785 MBD5Q9P267 1494 aa26.46■■□□□ 1.83
RBM38-202ENST00000344785 C9orf84Q5VXU9 1444 aa26.45■■□□□ 1.82
RBM38-202ENST00000344785 DDX10Q13206 875 aaKnown RBP26.44■■□□□ 1.82
RBM38-202ENST00000344785 L3MBTL2Q969R5 705 aa26.43■■□□□ 1.82
RBM38-202ENST00000344785 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
RBM38-202ENST00000344785 SAMD9LQ8IVG5 1584 aa26.42■■□□□ 1.82
RBM38-202ENST00000344785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.41■■□□□ 1.822e-6■■□□□ 14.1
RBM38-202ENST00000344785 ANKRD50Q9ULJ7 1429 aa26.41■■□□□ 1.82
RBM38-202ENST00000344785 PREX2Q70Z35 1606 aa26.41■■□□□ 1.82
RBM38-202ENST00000344785 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
RBM38-202ENST00000344785 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
RBM38-202ENST00000344785 TSPY4P0CV99 314 aa26.38■■□□□ 1.81
RBM38-202ENST00000344785 TSPY10P0CW01 314 aa26.38■■□□□ 1.81
RBM38-202ENST00000344785 RPRD2Q5VT52 1461 aaKnown RBP26.37■■□□□ 1.81
RBM38-202ENST00000344785 ARHGEF5Q12774 1597 aa26.36■■□□□ 1.81
RBM38-202ENST00000344785 UHRF1BP1LA0JNW5 1464 aa26.33■■□□□ 1.81
RBM38-202ENST00000344785 ZCCHC11Q5TAX3 1644 aaKnown RBP26.33■■□□□ 1.81
RBM38-202ENST00000344785 KIF15Q9NS87 1388 aa26.31■■□□□ 1.8
RBM38-202ENST00000344785 PKD2Q13563 968 aa26.31■■□□□ 1.8
RBM38-202ENST00000344785 ARHGAP5Q13017 1502 aa26.3■■□□□ 1.8
RBM38-202ENST00000344785 CCDC141Q6ZP82 1450 aa26.3■■□□□ 1.8
RBM38-202ENST00000344785 TEX14Q8IWB6 1497 aa26.3■■□□□ 1.8
RBM38-202ENST00000344785 SYCP2Q9BX26 1530 aa26.29■■□□□ 1.8
RBM38-202ENST00000344785 NBPF8Q3BBV2 869 aa26.29■■□□□ 1.8
RBM38-202ENST00000344785 KIAA1107Q9UPP5 1409 aa26.29■■□□□ 1.8
RBM38-202ENST00000344785 GTF3C3Q9Y5Q9 886 aa26.28■■□□□ 1.8
RBM38-202ENST00000344785 NUP155O75694 1391 aa26.28■■□□□ 1.8
RBM38-202ENST00000344785 HSPA5P11021 654 aaKnown RBP26.25■■□□□ 1.79
RBM38-202ENST00000344785 ARHGEF12Q9NZN5 1544 aa26.24■■□□□ 1.79
RBM38-202ENST00000344785 RSPH4AQ5TD94 716 aa26.23■■□□□ 1.79
RBM38-202ENST00000344785 MYO5CQ9NQX4 1742 aa26.23■■□□□ 1.79
RBM38-202ENST00000344785 PLCH2O75038 1416 aa26.21■■□□□ 1.79
RBM38-202ENST00000344785 KDM5DQ9BY66 1539 aa26.18■■□□□ 1.78
RBM38-202ENST00000344785 WASHC2AQ641Q2 1341 aa26.15■■□□□ 1.78
RBM38-202ENST00000344785 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.78
RBM38-202ENST00000344785 MAST1Q9Y2H9 1570 aa26.14■■□□□ 1.78
RBM38-202ENST00000344785 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
RBM38-202ENST00000344785 C11orf95C9JLR9 678 aaPredicted RBP26.12■■□□□ 1.77
RBM38-202ENST00000344785 PLEKHH2Q8IVE3 1493 aa26.11■■□□□ 1.77
RBM38-202ENST00000344785 TRAPPC8Q9Y2L5 1435 aa26.09■■□□□ 1.77
RBM38-202ENST00000344785 FAM135AQ9P2D6 1515 aa26.07■■□□□ 1.76
RBM38-202ENST00000344785 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
RBM38-202ENST00000344785 ABCC1P33527 1531 aa26.06■■□□□ 1.76
RBM38-202ENST00000344785 SPATA31E1Q6ZUB1 1445 aa26.05■■□□□ 1.76
RBM38-202ENST00000344785 WDR7Q9Y4E6 1490 aa26.05■■□□□ 1.76
RBM38-202ENST00000344785 PLXNC1O60486 1568 aa26.04■■□□□ 1.76
RBM38-202ENST00000344785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.76
RBM38-202ENST00000344785 ANP32CO43423 234 aa26.02■■□□□ 1.76
RBM38-202ENST00000344785 AFAP1Q8N556 730 aa26.02■■□□□ 1.76
RBM38-202ENST00000344785 ZNF326Q5BKZ1 582 aaKnown RBP26.02■■□□□ 1.76
RBM38-202ENST00000344785 UNC13BO14795 1591 aa26■■□□□ 1.75
RBM38-202ENST00000344785 DUOX2Q9NRD8 1548 aa25.97■■□□□ 1.75
RBM38-202ENST00000344785 PLA2R1Q13018 1463 aa25.97■■□□□ 1.75
RBM38-202ENST00000344785 ASXL2Q76L83 1435 aa25.97■■□□□ 1.75
RBM38-202ENST00000344785 CCER2I3L3R5 266 aa25.96■■□□□ 1.75
RBM38-202ENST00000344785 CCDC7Q96M83 1385 aa25.96■■□□□ 1.75
RBM38-202ENST00000344785 ARAP3Q8WWN8 1544 aa25.95■■□□□ 1.74
RBM38-202ENST00000344785 KDM2AQ9Y2K7 1162 aa25.93■■□□□ 1.74
RBM38-202ENST00000344785 UHRF1BP1Q6BDS2 1440 aa25.93■■□□□ 1.74
RBM38-202ENST00000344785 SPAG9O60271 1321 aaKnown RBP25.93■■□□□ 1.74
RBM38-202ENST00000344785 ABCA9Q8IUA7 1624 aa25.92■■□□□ 1.74
RBM38-202ENST00000344785 ERBINQ96RT1 1412 aa25.92■■□□□ 1.74
RBM38-202ENST00000344785 FANCAO15360 1455 aa25.91■■□□□ 1.74
RBM38-202ENST00000344785 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
RBM38-202ENST00000344785 IQGAP3Q86VI3 1631 aa25.9■■□□□ 1.74
RBM38-202ENST00000344785 DCAF11Q8TEB1 546 aa25.9■■□□□ 1.74
RBM38-202ENST00000344785 MAGI2Q86UL8 1455 aa25.9■■□□□ 1.74
RBM38-202ENST00000344785 USP47Q96K76 1375 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms