RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 NOL8Q76FK4 1167 aaKnown RBP10.12□□□□□ -0.79
KPNA1-201ENST00000344337 ERICH6BQ5W0A0 696 aa10.11□□□□□ -0.79
KPNA1-201ENST00000344337 PDE4AP27815 886 aa10.11□□□□□ -0.79
KPNA1-201ENST00000344337 VPS8Q8N3P4 1428 aa10.11□□□□□ -0.79
KPNA1-201ENST00000344337 CRBNQ96SW2 442 aa10.11□□□□□ -0.79
KPNA1-201ENST00000344337 MFAP1P55081 439 aaKnown RBP10.11□□□□□ -0.79
KPNA1-201ENST00000344337 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
KPNA1-201ENST00000344337 PKD2Q13563 968 aa10.1□□□□□ -0.79
KPNA1-201ENST00000344337 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
KPNA1-201ENST00000344337 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
KPNA1-201ENST00000344337 CDCA7LQ96GN5 454 aa10.09□□□□□ -0.79
KPNA1-201ENST00000344337 TCERG1O14776 1098 aaKnown RBP10.09□□□□□ -0.79
KPNA1-201ENST00000344337 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
KPNA1-201ENST00000344337 A0A0G2JS52 829 aa10.07□□□□□ -0.8
KPNA1-201ENST00000344337 NUDCQ9Y266 331 aa10.07□□□□□ -0.8
KPNA1-201ENST00000344337 PRKCSHP14314 528 aaPredicted RBP10.07□□□□□ -0.8
KPNA1-201ENST00000344337 AKNAQ7Z591 1439 aa10.06□□□□□ -0.8
KPNA1-201ENST00000344337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.06□□□□□ -0.8
KPNA1-201ENST00000344337 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
KPNA1-201ENST00000344337 STK26Q9P289 416 aa10.06□□□□□ -0.8
KPNA1-201ENST00000344337 ST20-MTHFSA0A0A6YYL1 179 aa10.06□□□□□ -0.8
KPNA1-201ENST00000344337 CHMP7Q8WUX9 453 aaPredicted RBP10.06□□□□□ -0.8
KPNA1-201ENST00000344337 ELL2O00472 640 aaPredicted RBP10.05□□□□□ -0.8
KPNA1-201ENST00000344337 EEA1Q15075 1411 aa10.04□□□□□ -0.8
KPNA1-201ENST00000344337 MPNDQ8N594 471 aa10.03□□□□□ -0.8
KPNA1-201ENST00000344337 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.8
KPNA1-201ENST00000344337 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
KPNA1-201ENST00000344337 COG6Q9Y2V7 657 aa10.02□□□□□ -0.81
KPNA1-201ENST00000344337 FHOD3Q2V2M9 1422 aa10.02□□□□□ -0.81
KPNA1-201ENST00000344337 CUX2O14529 1486 aa10.02□□□□□ -0.81
KPNA1-201ENST00000344337 GSE1Q14687 1217 aa10.02□□□□□ -0.81
KPNA1-201ENST00000344337 ZNF428Q96B54 188 aa10.02□□□□□ -0.81
KPNA1-201ENST00000344337 PNNQ9H307 717 aaKnown RBP10.02□□□□□ -0.81
KPNA1-201ENST00000344337 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
KPNA1-201ENST00000344337 FRAT2O75474 233 aaPredicted RBP10.01□□□□□ -0.81
KPNA1-201ENST00000344337 KIF27Q86VH2 1401 aa10.01□□□□□ -0.81
KPNA1-201ENST00000344337 MYH16Q9H6N6 1097 aa10□□□□□ -0.81
KPNA1-201ENST00000344337 CARMIL1Q5VZK9 1371 aa10□□□□□ -0.81
KPNA1-201ENST00000344337 NUTM2FA1L443 756 aa9.99□□□□□ -0.81
KPNA1-201ENST00000344337 NFKBIBQ15653 356 aa9.99□□□□□ -0.81
KPNA1-201ENST00000344337 ITPRIPQ8IWB1 547 aa9.99□□□□□ -0.81
KPNA1-201ENST00000344337 NAP1L2Q9ULW6 460 aaPredicted RBP9.99□□□□□ -0.81
KPNA1-201ENST00000344337 FANCIQ9NVI1 1328 aa9.99□□□□□ -0.81
KPNA1-201ENST00000344337 ZNF644Q9H582 1327 aaPredicted RBP9.99□□□□□ -0.81
KPNA1-201ENST00000344337 HNRNPMP52272 730 aaKnown RBP eCLIP9.99□□□□□ -0.81
KPNA1-201ENST00000344337 RRP1P56182 461 aaKnown RBP9.98□□□□□ -0.81
KPNA1-201ENST00000344337 HSCBQ8IWL3 235 aa9.98□□□□□ -0.81
KPNA1-201ENST00000344337 PANK3Q9H999 370 aa9.98□□□□□ -0.81
KPNA1-201ENST00000344337 PLEKHD1A6NEE1 506 aa9.97□□□□□ -0.81
KPNA1-201ENST00000344337 GOLGA6L22H0YM25 854 aa9.97□□□□□ -0.81
KPNA1-201ENST00000344337 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.81
KPNA1-201ENST00000344337 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.81
KPNA1-201ENST00000344337 MSNP26038 577 aaKnown RBP9.96□□□□□ -0.82
KPNA1-201ENST00000344337 TDRD9Q8NDG6 1382 aaKnown RBP9.96□□□□□ -0.82
KPNA1-201ENST00000344337 ROCK2O75116 1388 aaKnown RBP9.96□□□□□ -0.82
KPNA1-201ENST00000344337 APAF1O14727 1248 aa9.96□□□□□ -0.82
KPNA1-201ENST00000344337 PANK1Q8TE04 598 aa9.95□□□□□ -0.82
KPNA1-201ENST00000344337 A0A0U1RQG5 324 aaPredicted RBP9.94□□□□□ -0.82
KPNA1-201ENST00000344337 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
KPNA1-201ENST00000344337 GOLGA6L3A6NEY3 463 aa9.94□□□□□ -0.82
KPNA1-201ENST00000344337 HSP90AA2PQ14568 343 aaPredicted RBP9.94□□□□□ -0.82
KPNA1-201ENST00000344337 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
KPNA1-201ENST00000344337 ARHGAP35Q9NRY4 1499 aa9.94□□□□□ -0.82
KPNA1-201ENST00000344337 TMF1P82094 1093 aa9.94□□□□□ -0.82
KPNA1-201ENST00000344337 MLECQ14165 292 aa9.94□□□□□ -0.82
KPNA1-201ENST00000344337 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
KPNA1-201ENST00000344337 MAPK8IP3Q9UPT6 1336 aa9.93□□□□□ -0.82
KPNA1-201ENST00000344337 CHMP3Q9Y3E7 222 aa9.93□□□□□ -0.82
KPNA1-201ENST00000344337 SRPK2P78362 688 aaKnown RBP9.93□□□□□ -0.82
KPNA1-201ENST00000344337 RBM10P98175 930 aaKnown RBP9.92□□□□□ -0.82
KPNA1-201ENST00000344337 CCDC9Q9Y3X0 531 aaKnown RBP9.92□□□□□ -0.82
KPNA1-201ENST00000344337 KIF7Q2M1P5 1343 aa9.92□□□□□ -0.82
KPNA1-201ENST00000344337 NUP155O75694 1391 aa9.92□□□□□ -0.82
KPNA1-201ENST00000344337 FAM13BQ9NYF5 915 aa9.92□□□□□ -0.82
KPNA1-201ENST00000344337 KTN1Q86UP2 1357 aaKnown RBP9.91□□□□□ -0.82
KPNA1-201ENST00000344337 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
KPNA1-201ENST00000344337 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
KPNA1-201ENST00000344337 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
KPNA1-201ENST00000344337 SMC4Q9NTJ3 1288 aa9.91□□□□□ -0.82
KPNA1-201ENST00000344337 GGT6Q6P531 493 aa9.9□□□□□ -0.82
KPNA1-201ENST00000344337 C20orf194Q5TEA3 1177 aa9.9□□□□□ -0.82
KPNA1-201ENST00000344337 NECTIN2Q92692 538 aa9.9□□□□□ -0.82
KPNA1-201ENST00000344337 TRAK1Q9UPV9 953 aa9.9□□□□□ -0.82
KPNA1-201ENST00000344337 NBPF8Q3BBV2 869 aa9.9□□□□□ -0.83
KPNA1-201ENST00000344337 SLC4A10Q6U841 1118 aa9.9□□□□□ -0.83
KPNA1-201ENST00000344337 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
KPNA1-201ENST00000344337 BCAR3O75815 825 aa9.89□□□□□ -0.83
KPNA1-201ENST00000344337 DRC7Q8IY82 874 aa9.89□□□□□ -0.83
KPNA1-201ENST00000344337 CFAP53Q96M91 514 aa9.89□□□□□ -0.83
KPNA1-201ENST00000344337 POGKQ9P215 609 aa9.89□□□□□ -0.83
KPNA1-201ENST00000344337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
KPNA1-201ENST00000344337 L1TD1Q5T7N2 865 aaKnown RBP9.88□□□□□ -0.83
KPNA1-201ENST00000344337 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
KPNA1-201ENST00000344337 FAM161AQ3B820 660 aa9.87□□□□□ -0.83
KPNA1-201ENST00000344337 KCNJ4P48050 445 aa9.87□□□□□ -0.83
KPNA1-201ENST00000344337 ADAMTS8Q9UP79 889 aa9.87□□□□□ -0.83
KPNA1-201ENST00000344337 ANKRD45Q5TZF3 282 aa9.87□□□□□ -0.83
KPNA1-201ENST00000344337 OS9Q13438 667 aaPredicted RBP9.86□□□□□ -0.83
KPNA1-201ENST00000344337 LNPKQ9C0E8 428 aa9.86□□□□□ -0.83
KPNA1-201ENST00000344337 NLRP13Q86W25 1043 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms