RNA–Protein interactions for RNA: ENST00000344222.5

ZNF550-202, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-202ENST00000344222 CFAP43Q8NDM7 1665 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 RGL2O15211 777 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 NCOA2Q15596 1464 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 SOGA1O94964 1423 aa8.65□□□□□ -1.02
ZNF550-202ENST00000344222 CUL7Q14999 1698 aa8.65□□□□□ -1.02
ZNF550-202ENST00000344222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.65□□□□□ -1.02
ZNF550-202ENST00000344222 FGD1P98174 961 aa8.65□□□□□ -1.03
ZNF550-202ENST00000344222 VSIG10Q8N0Z9 540 aa8.64□□□□□ -1.03
ZNF550-202ENST00000344222 FAM43AQ8N2R8 423 aa8.64□□□□□ -1.03
ZNF550-202ENST00000344222 CHD1O14646 1710 aa8.64□□□□□ -1.03
ZNF550-202ENST00000344222 BRPF3Q9ULD4 1205 aa8.64□□□□□ -1.03
ZNF550-202ENST00000344222 CDK11AQ9UQ88 783 aaPredicted RBP8.63□□□□□ -1.03
ZNF550-202ENST00000344222 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
ZNF550-202ENST00000344222 PPP4R2Q9NY27 417 aa8.61□□□□□ -1.03
ZNF550-202ENST00000344222 CENPJQ9HC77 1338 aaPredicted RBP8.61□□□□□ -1.03
ZNF550-202ENST00000344222 NBR1Q14596 966 aa8.6□□□□□ -1.03
ZNF550-202ENST00000344222 ZNF219Q9P2Y4 722 aaPredicted RBP8.6□□□□□ -1.03
ZNF550-202ENST00000344222 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
ZNF550-202ENST00000344222 LMTK3Q96Q04 1460 aa8.6□□□□□ -1.03
ZNF550-202ENST00000344222 CTTNBP2Q8WZ74 1663 aa8.6□□□□□ -1.03
ZNF550-202ENST00000344222 CYB5RLQ6IPT4 315 aa8.59□□□□□ -1.03
ZNF550-202ENST00000344222 AQRO60306 1485 aaKnown RBP eCLIP8.58□□□□□ -1.04
ZNF550-202ENST00000344222 HECW2Q9P2P5 1572 aa8.57□□□□□ -1.04
ZNF550-202ENST00000344222 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
ZNF550-202ENST00000344222 URB2Q14146 1524 aaKnown RBP8.57□□□□□ -1.04
ZNF550-202ENST00000344222 SAMD9Q5K651 1589 aa8.57□□□□□ -1.04
ZNF550-202ENST00000344222 EIF4G3O43432 1585 aaKnown RBP8.56□□□□□ -1.04
ZNF550-202ENST00000344222 FANCD2Q9BXW9 1451 aa8.56□□□□□ -1.04
ZNF550-202ENST00000344222 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
ZNF550-202ENST00000344222 EFCAB5A4FU69 1503 aa8.56□□□□□ -1.04
ZNF550-202ENST00000344222 ABCA10Q8WWZ4 1543 aa8.56□□□□□ -1.04
ZNF550-202ENST00000344222 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
ZNF550-202ENST00000344222 RBM10P98175 930 aaKnown RBP8.55□□□□□ -1.04
ZNF550-202ENST00000344222 KDM4FA0A1W2PPD8 638 aa8.53□□□□□ -1.04
ZNF550-202ENST00000344222 RRAGDQ9NQL2 400 aaPredicted RBP8.53□□□□□ -1.04
ZNF550-202ENST00000344222 RRP9O43818 475 aaKnown RBP8.53□□□□□ -1.04
ZNF550-202ENST00000344222 NEFLP07196 543 aa8.53□□□□□ -1.04
ZNF550-202ENST00000344222 SMG6Q86US8 1419 aaKnown RBP8.52□□□□□ -1.05
ZNF550-202ENST00000344222 GSE1Q14687 1217 aa8.52□□□□□ -1.05
ZNF550-202ENST00000344222 CHGAP10645 457 aaKnown RBP8.51□□□□□ -1.05
ZNF550-202ENST00000344222 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
ZNF550-202ENST00000344222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.5□□□□□ -1.05
ZNF550-202ENST00000344222 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
ZNF550-202ENST00000344222 CALD1Q05682 793 aaKnown RBP8.48□□□□□ -1.05
ZNF550-202ENST00000344222 MYOM3Q5VTT5 1437 aa8.48□□□□□ -1.05
ZNF550-202ENST00000344222 SPINK5Q9NQ38 1064 aaPredicted RBP8.48□□□□□ -1.05
ZNF550-202ENST00000344222 HNRNPUL2Q1KMD3 747 aaKnown RBP8.47□□□□□ -1.05
ZNF550-202ENST00000344222 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
ZNF550-202ENST00000344222 PROM2Q8N271 834 aa8.46□□□□□ -1.05
ZNF550-202ENST00000344222 FHAD1B1AJZ9 1412 aa8.46□□□□□ -1.06
ZNF550-202ENST00000344222 ZBED9Q6R2W3 1325 aa8.46□□□□□ -1.06
ZNF550-202ENST00000344222 ZNF608Q9ULD9 1512 aaPredicted RBP8.45□□□□□ -1.06
ZNF550-202ENST00000344222 LRRIQ1Q96JM4 1722 aa8.45□□□□□ -1.06
ZNF550-202ENST00000344222 PDE4CQ08493 712 aa8.45□□□□□ -1.06
ZNF550-202ENST00000344222 RAPGEF2Q9Y4G8 1499 aa8.45□□□□□ -1.06
ZNF550-202ENST00000344222 BBXQ8WY36 941 aaPredicted RBP8.45□□□□□ -1.06
ZNF550-202ENST00000344222 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
ZNF550-202ENST00000344222 TIAM1Q13009 1591 aa8.44□□□□□ -1.06
ZNF550-202ENST00000344222 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
ZNF550-202ENST00000344222 PDIA4P13667 645 aaKnown RBP8.44□□□□□ -1.06
ZNF550-202ENST00000344222 ADAMTS12P58397 1594 aa8.44□□□□□ -1.06
ZNF550-202ENST00000344222 IRX6P78412 446 aaPredicted RBP8.44□□□□□ -1.06
ZNF550-202ENST00000344222 GLIPR1L2Q4G1C9 344 aa8.44□□□□□ -1.06
ZNF550-202ENST00000344222 SPRYD3Q8NCJ5 442 aa8.44□□□□□ -1.06
ZNF550-202ENST00000344222 E9PCH4 1651 aa8.43□□□□□ -1.06
ZNF550-202ENST00000344222 KDM6BO15054 1643 aa8.43□□□□□ -1.06
ZNF550-202ENST00000344222 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
ZNF550-202ENST00000344222 NEFMP07197 916 aa8.43□□□□□ -1.06
ZNF550-202ENST00000344222 RTL5Q5HYW3 569 aaPredicted RBP8.43□□□□□ -1.06
ZNF550-202ENST00000344222 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
ZNF550-202ENST00000344222 AKNAQ7Z591 1439 aa8.43□□□□□ -1.06
ZNF550-202ENST00000344222 TOPBP1Q92547 1522 aa8.43□□□□□ -1.06
ZNF550-202ENST00000344222 DDX10Q13206 875 aaKnown RBP8.42□□□□□ -1.06
ZNF550-202ENST00000344222 KIF27Q86VH2 1401 aa8.42□□□□□ -1.06
ZNF550-202ENST00000344222 DENND4BO75064 1496 aaPredicted RBP8.42□□□□□ -1.06
ZNF550-202ENST00000344222 GAPVD1Q14C86 1478 aa8.42□□□□□ -1.06
ZNF550-202ENST00000344222 MAGI1Q96QZ7 1491 aaPredicted RBP8.42□□□□□ -1.06
ZNF550-202ENST00000344222 NLRP1Q9C000 1473 aa8.42□□□□□ -1.06
ZNF550-202ENST00000344222 CLCN1P35523 988 aa8.42□□□□□ -1.06
ZNF550-202ENST00000344222 POLA2Q14181 598 aa8.42□□□□□ -1.06
ZNF550-202ENST00000344222 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
ZNF550-202ENST00000344222 NFKBIBQ15653 356 aa8.41□□□□□ -1.06
ZNF550-202ENST00000344222 ABCC10Q5T3U5 1492 aa8.41□□□□□ -1.06
ZNF550-202ENST00000344222 PPM1GO15355 546 aaPredicted RBP8.41□□□□□ -1.06
ZNF550-202ENST00000344222 ARHGAP35Q9NRY4 1499 aa8.4□□□□□ -1.06
ZNF550-202ENST00000344222 CNTLNQ9NXG0 1405 aa8.4□□□□□ -1.06
ZNF550-202ENST00000344222 FYCO1Q9BQS8 1478 aa8.4□□□□□ -1.07
ZNF550-202ENST00000344222 GTF2E1P29083 439 aaPredicted RBP8.39□□□□□ -1.07
ZNF550-202ENST00000344222 BCL11BQ9C0K0 894 aaPredicted RBP8.39□□□□□ -1.07
ZNF550-202ENST00000344222 FGD5Q6ZNL6 1462 aa8.39□□□□□ -1.07
ZNF550-202ENST00000344222 SPATA31D1Q6ZQQ2 1576 aa8.39□□□□□ -1.07
ZNF550-202ENST00000344222 ADGRL1O94910 1474 aa8.39□□□□□ -1.07
ZNF550-202ENST00000344222 ANP32AP39687 249 aaKnown RBP8.39□□□□□ -1.07
ZNF550-202ENST00000344222 CCNB3Q8WWL7 1395 aa8.39□□□□□ -1.07
ZNF550-202ENST00000344222 ADCY10Q96PN6 1610 aa8.38□□□□□ -1.07
ZNF550-202ENST00000344222 DIP2BQ9P265 1576 aa8.38□□□□□ -1.07
ZNF550-202ENST00000344222 FSD2A1L4K1 749 aa8.38□□□□□ -1.07
ZNF550-202ENST00000344222 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
ZNF550-202ENST00000344222 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
ZNF550-202ENST00000344222 NCOA1Q15788 1441 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms