RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
CCDC18-201ENST00000343253 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
CCDC18-201ENST00000343253 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
CCDC18-201ENST00000343253 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
CCDC18-201ENST00000343253 TULP1O00294 542 aaPredicted RBP13.62□□□□□ -0.23
CCDC18-201ENST00000343253 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
CCDC18-201ENST00000343253 TMF1P82094 1093 aa13.62□□□□□ -0.23
CCDC18-201ENST00000343253 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
CCDC18-201ENST00000343253 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
CCDC18-201ENST00000343253 SKOR2Q2VWA4 1001 aaPredicted RBP13.61□□□□□ -0.23
CCDC18-201ENST00000343253 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
CCDC18-201ENST00000343253 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
CCDC18-201ENST00000343253 GNL2Q13823 731 aaKnown RBP13.59□□□□□ -0.23
CCDC18-201ENST00000343253 GPS2Q13227 327 aa13.58□□□□□ -0.24
CCDC18-201ENST00000343253 A0A0G2JS52 829 aa13.57□□□□□ -0.24
CCDC18-201ENST00000343253 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
CCDC18-201ENST00000343253 ZNF771Q7L3S4 317 aaPredicted RBP13.57□□□□□ -0.24
CCDC18-201ENST00000343253 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
CCDC18-201ENST00000343253 PLEKHD1A6NEE1 506 aa13.56□□□□□ -0.24
CCDC18-201ENST00000343253 RALBP1Q15311 655 aa13.55□□□□□ -0.24
CCDC18-201ENST00000343253 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
CCDC18-201ENST00000343253 TPM3P06753 285 aa13.55□□□□□ -0.24
CCDC18-201ENST00000343253 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
CCDC18-201ENST00000343253 MAP7D2Q96T17 732 aa13.55□□□□□ -0.24
CCDC18-201ENST00000343253 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
CCDC18-201ENST00000343253 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
CCDC18-201ENST00000343253 CCNB3Q8WWL7 1395 aa13.54□□□□□ -0.24
CCDC18-201ENST00000343253 MTERF4Q7Z6M4 381 aaKnown RBP13.54□□□□□ -0.24
CCDC18-201ENST00000343253 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
CCDC18-201ENST00000343253 CALRP27797 417 aaKnown RBP13.53□□□□□ -0.24
CCDC18-201ENST00000343253 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
CCDC18-201ENST00000343253 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
CCDC18-201ENST00000343253 ST18O60284 1047 aa13.53□□□□□ -0.24
CCDC18-201ENST00000343253 HSPA5P11021 654 aaKnown RBP13.53□□□□□ -0.24
CCDC18-201ENST00000343253 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
CCDC18-201ENST00000343253 PDE4AP27815 886 aa13.51□□□□□ -0.25
CCDC18-201ENST00000343253 TEX35Q5T0J7 233 aa13.51□□□□□ -0.25
CCDC18-201ENST00000343253 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
CCDC18-201ENST00000343253 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
CCDC18-201ENST00000343253 FAM161AQ3B820 660 aa13.5□□□□□ -0.25
CCDC18-201ENST00000343253 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
CCDC18-201ENST00000343253 FAM43AQ8N2R8 423 aa13.5□□□□□ -0.25
CCDC18-201ENST00000343253 POGKQ9P215 609 aa13.5□□□□□ -0.25
CCDC18-201ENST00000343253 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
CCDC18-201ENST00000343253 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
CCDC18-201ENST00000343253 SOGA1O94964 1423 aa13.49□□□□□ -0.25
CCDC18-201ENST00000343253 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
CCDC18-201ENST00000343253 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
CCDC18-201ENST00000343253 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
CCDC18-201ENST00000343253 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
CCDC18-201ENST00000343253 HMMRO75330 724 aa13.47□□□□□ -0.25
CCDC18-201ENST00000343253 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
CCDC18-201ENST00000343253 APBB1O00213 710 aa13.47□□□□□ -0.25
CCDC18-201ENST00000343253 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.25
CCDC18-201ENST00000343253 PKNOX2Q96KN3 472 aa13.46□□□□□ -0.25
CCDC18-201ENST00000343253 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.26
CCDC18-201ENST00000343253 GOLGA6L19H0YKK7 550 aa13.45□□□□□ -0.26
CCDC18-201ENST00000343253 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
CCDC18-201ENST00000343253 CCDC70Q6NSX1 233 aa13.44□□□□□ -0.26
CCDC18-201ENST00000343253 NOM1Q5C9Z4 860 aaKnown RBP13.44□□□□□ -0.26
CCDC18-201ENST00000343253 PHLDB1Q86UU1 1377 aa13.44□□□□□ -0.26
CCDC18-201ENST00000343253 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
CCDC18-201ENST00000343253 BECN2A8MW95 431 aa13.44□□□□□ -0.26
CCDC18-201ENST00000343253 CLSTN1O94985 981 aa13.43□□□□□ -0.26
CCDC18-201ENST00000343253 NLRP13Q86W25 1043 aa13.43□□□□□ -0.26
CCDC18-201ENST00000343253 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
CCDC18-201ENST00000343253 PLEKHG5O94827 1062 aa13.42□□□□□ -0.26
CCDC18-201ENST00000343253 CHMP4CQ96CF2 233 aa13.42□□□□□ -0.26
CCDC18-201ENST00000343253 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
CCDC18-201ENST00000343253 GPATCH3Q96I76 525 aa13.41□□□□□ -0.26
CCDC18-201ENST00000343253 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
CCDC18-201ENST00000343253 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
CCDC18-201ENST00000343253 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
CCDC18-201ENST00000343253 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
CCDC18-201ENST00000343253 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
CCDC18-201ENST00000343253 CCAR2Q8N163 923 aaKnown RBP13.41□□□□□ -0.26
CCDC18-201ENST00000343253 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
CCDC18-201ENST00000343253 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
CCDC18-201ENST00000343253 CEP89Q96ST8 783 aa13.4□□□□□ -0.26
CCDC18-201ENST00000343253 HSP90B1P14625 803 aaKnown RBP13.4□□□□□ -0.26
CCDC18-201ENST00000343253 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.26
CCDC18-201ENST00000343253 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
CCDC18-201ENST00000343253 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC18-201ENST00000343253 TPM1P09493 284 aa13.4□□□□□ -0.26
CCDC18-201ENST00000343253 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
CCDC18-201ENST00000343253 ARGLU1Q9NWB6 273 aaPredicted RBP13.39□□□□□ -0.27
CCDC18-201ENST00000343253 TPM2P07951 284 aa13.39□□□□□ -0.27
CCDC18-201ENST00000343253 SLC4A3P48751 1232 aa13.39□□□□□ -0.27
CCDC18-201ENST00000343253 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
CCDC18-201ENST00000343253 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
CCDC18-201ENST00000343253 MRE11P49959 708 aa13.38□□□□□ -0.27
CCDC18-201ENST00000343253 ROCK2O75116 1388 aaKnown RBP13.37□□□□□ -0.27
CCDC18-201ENST00000343253 ACBD3Q9H3P7 528 aa13.37□□□□□ -0.27
CCDC18-201ENST00000343253 KIF27Q86VH2 1401 aa13.37□□□□□ -0.27
CCDC18-201ENST00000343253 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
CCDC18-201ENST00000343253 NPHP1O15259 732 aa13.36□□□□□ -0.27
CCDC18-201ENST00000343253 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
CCDC18-201ENST00000343253 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
CCDC18-201ENST00000343253 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
CCDC18-201ENST00000343253 CLUAP1Q96AJ1 413 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms