RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
LMX1A-202ENST00000342310 MSH5O43196 834 aa16.88■□□□□ 0.29
LMX1A-202ENST00000342310 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
LMX1A-202ENST00000342310 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
LMX1A-202ENST00000342310 CCDC7Q96M83 1385 aa16.86■□□□□ 0.29
LMX1A-202ENST00000342310 PLIN1O60240 522 aa16.86■□□□□ 0.29
LMX1A-202ENST00000342310 JPH4Q96JJ6 628 aa16.85■□□□□ 0.29
LMX1A-202ENST00000342310 ANP32AP39687 249 aaKnown RBP16.84■□□□□ 0.29
LMX1A-202ENST00000342310 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.29
LMX1A-202ENST00000342310 SKAP1Q86WV1 359 aa16.82■□□□□ 0.28
LMX1A-202ENST00000342310 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
LMX1A-202ENST00000342310 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
LMX1A-202ENST00000342310 PRG4Q92954 1404 aaPredicted RBP16.81■□□□□ 0.28
LMX1A-202ENST00000342310 AKNAQ7Z591 1439 aa16.81■□□□□ 0.28
LMX1A-202ENST00000342310 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
LMX1A-202ENST00000342310 USP47Q96K76 1375 aa16.79■□□□□ 0.28
LMX1A-202ENST00000342310 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
LMX1A-202ENST00000342310 DEKP35659 375 aaKnown RBP16.79■□□□□ 0.28
LMX1A-202ENST00000342310 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
LMX1A-202ENST00000342310 NBPF1Q3BBV0 1214 aa16.77■□□□□ 0.28
LMX1A-202ENST00000342310 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.27
LMX1A-202ENST00000342310 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
LMX1A-202ENST00000342310 DNMBPQ6XZF7 1577 aa16.76■□□□□ 0.27
LMX1A-202ENST00000342310 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
LMX1A-202ENST00000342310 CDCA7LQ96GN5 454 aa16.75■□□□□ 0.27
LMX1A-202ENST00000342310 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
LMX1A-202ENST00000342310 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
LMX1A-202ENST00000342310 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
LMX1A-202ENST00000342310 ZBED9Q6R2W3 1325 aa16.73■□□□□ 0.27
LMX1A-202ENST00000342310 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
LMX1A-202ENST00000342310 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
LMX1A-202ENST00000342310 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
LMX1A-202ENST00000342310 PTPN23Q9H3S7 1636 aa16.71■□□□□ 0.27
LMX1A-202ENST00000342310 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.27
LMX1A-202ENST00000342310 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
LMX1A-202ENST00000342310 RGS3P49796 1198 aa16.7■□□□□ 0.26
LMX1A-202ENST00000342310 EFCAB5A4FU69 1503 aa16.69■□□□□ 0.26
LMX1A-202ENST00000342310 MAP3K1Q13233 1512 aa16.69■□□□□ 0.26
LMX1A-202ENST00000342310 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
LMX1A-202ENST00000342310 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.26
LMX1A-202ENST00000342310 CCDC146Q8IYE0 955 aa16.68■□□□□ 0.26
LMX1A-202ENST00000342310 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
LMX1A-202ENST00000342310 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
LMX1A-202ENST00000342310 RCAN3Q9UKA8 241 aa16.67■□□□□ 0.26
LMX1A-202ENST00000342310 PANK3Q9H999 370 aa16.67■□□□□ 0.26
LMX1A-202ENST00000342310 ANKRD30BQ9BXX2 1392 aa16.67■□□□□ 0.26
LMX1A-202ENST00000342310 PLB1Q6P1J6 1458 aa16.66■□□□□ 0.26
LMX1A-202ENST00000342310 SLC4A3P48751 1232 aa16.66■□□□□ 0.26
LMX1A-202ENST00000342310 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
LMX1A-202ENST00000342310 ARXQ96QS3 562 aa16.66■□□□□ 0.26
LMX1A-202ENST00000342310 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
LMX1A-202ENST00000342310 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
LMX1A-202ENST00000342310 DAPK1P53355 1430 aa16.64■□□□□ 0.26
LMX1A-202ENST00000342310 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
LMX1A-202ENST00000342310 ABCC5O15440 1437 aa16.64■□□□□ 0.25
LMX1A-202ENST00000342310 KNSTRNQ9Y448 316 aa16.63■□□□□ 0.25
LMX1A-202ENST00000342310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.63■□□□□ 0.25
LMX1A-202ENST00000342310 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
LMX1A-202ENST00000342310 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
LMX1A-202ENST00000342310 ANKRD50Q9ULJ7 1429 aa16.62■□□□□ 0.25
LMX1A-202ENST00000342310 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
LMX1A-202ENST00000342310 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
LMX1A-202ENST00000342310 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
LMX1A-202ENST00000342310 KDM6BO15054 1643 aa16.61■□□□□ 0.25
LMX1A-202ENST00000342310 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
LMX1A-202ENST00000342310 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
LMX1A-202ENST00000342310 KIF15Q9NS87 1388 aa16.58■□□□□ 0.24
LMX1A-202ENST00000342310 FRAT1Q92837 279 aaPredicted RBP16.57■□□□□ 0.24
LMX1A-202ENST00000342310 NCOA1Q15788 1441 aa16.55■□□□□ 0.24
LMX1A-202ENST00000342310 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
LMX1A-202ENST00000342310 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
LMX1A-202ENST00000342310 TMF1P82094 1093 aa16.55■□□□□ 0.24
LMX1A-202ENST00000342310 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
LMX1A-202ENST00000342310 CFAP43Q8NDM7 1665 aa16.55■□□□□ 0.24
LMX1A-202ENST00000342310 NEFMP07197 916 aa16.54■□□□□ 0.24
LMX1A-202ENST00000342310 RRP1P56182 461 aaKnown RBP16.54■□□□□ 0.24
LMX1A-202ENST00000342310 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
LMX1A-202ENST00000342310 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
LMX1A-202ENST00000342310 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
LMX1A-202ENST00000342310 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
LMX1A-202ENST00000342310 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
LMX1A-202ENST00000342310 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.24
LMX1A-202ENST00000342310 IQGAP2Q13576 1575 aa16.52■□□□□ 0.23
LMX1A-202ENST00000342310 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.23
LMX1A-202ENST00000342310 CUL7Q14999 1698 aa16.51■□□□□ 0.23
LMX1A-202ENST00000342310 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
LMX1A-202ENST00000342310 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
LMX1A-202ENST00000342310 RALBP1Q15311 655 aa16.5■□□□□ 0.23
LMX1A-202ENST00000342310 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
LMX1A-202ENST00000342310 BCL2L13Q9BXK5 485 aa16.5■□□□□ 0.23
LMX1A-202ENST00000342310 KIF3BO15066 747 aa16.5■□□□□ 0.23
LMX1A-202ENST00000342310 GGT6Q6P531 493 aa16.5■□□□□ 0.23
LMX1A-202ENST00000342310 RPRD2Q5VT52 1461 aaKnown RBP16.5■□□□□ 0.23
LMX1A-202ENST00000342310 CCDC144AA2RUR9 1427 aa16.5■□□□□ 0.23
LMX1A-202ENST00000342310 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
LMX1A-202ENST00000342310 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
LMX1A-202ENST00000342310 PTPRGP23470 1445 aa16.49■□□□□ 0.23
LMX1A-202ENST00000342310 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
LMX1A-202ENST00000342310 PDE4AP27815 886 aa16.48■□□□□ 0.23
LMX1A-202ENST00000342310 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms