RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 EEA1Q15075 1411 aa28.52■■■□□ 2.16
TRA2B-202ENST00000342294 ARHGEF12Q9NZN5 1544 aa28.5■■■□□ 2.15
TRA2B-202ENST00000342294 ATP10AO60312 1499 aa28.48■■■□□ 2.15
TRA2B-202ENST00000342294 FER1L4A9Z1Z3 1794 aa28.48■■■□□ 2.15
TRA2B-202ENST00000342294 CDK13Q14004 1512 aaKnown RBP28.48■■■□□ 2.15
TRA2B-202ENST00000342294 C9orf84Q5VXU9 1444 aa28.44■■■□□ 2.14
TRA2B-202ENST00000342294 CEBPAP49715 358 aaPredicted RBP28.42■■■□□ 2.14
TRA2B-202ENST00000342294 EFCAB2Q5VUJ9 269 aa28.41■■■□□ 2.14
TRA2B-202ENST00000342294 PREX1Q8TCU6 1659 aa28.38■■■□□ 2.13
TRA2B-202ENST00000342294 DMRT2Q9Y5R5 561 aa28.36■■■□□ 2.13
TRA2B-202ENST00000342294 ILDR2Q71H61 639 aa28.33■■■□□ 2.13
TRA2B-202ENST00000342294 STRCQ7RTU9 1775 aa28.32■■■□□ 2.12
TRA2B-202ENST00000342294 ZNF518AQ6AHZ1 1483 aa28.31■■■□□ 2.12
TRA2B-202ENST00000342294 AFAP1Q8N556 730 aa28.3■■■□□ 2.12
TRA2B-202ENST00000342294 UHRF1BP1Q6BDS2 1440 aa28.29■■■□□ 2.12
TRA2B-202ENST00000342294 DISP3Q9P2K9 1392 aa28.29■■■□□ 2.12
TRA2B-202ENST00000342294 MYO5CQ9NQX4 1742 aa28.29■■■□□ 2.12
TRA2B-202ENST00000342294 KDM5CP41229 1560 aa28.28■■■□□ 2.12
TRA2B-202ENST00000342294 CDK11AQ9UQ88 783 aaPredicted RBP28.28■■■□□ 2.12
TRA2B-202ENST00000342294 FMN1Q68DA7 1419 aa28.26■■■□□ 2.12
TRA2B-202ENST00000342294 ATP1B4Q9UN42 357 aaPredicted RBP28.25■■■□□ 2.11
TRA2B-202ENST00000342294 SOCS7O14512 581 aa28.24■■■□□ 2.11
TRA2B-202ENST00000342294 KIF14Q15058 1648 aa28.24■■■□□ 2.11
TRA2B-202ENST00000342294 PTPRTO14522 1441 aa28.24■■■□□ 2.11
TRA2B-202ENST00000342294 SETD1BQ9UPS6 1966 aaKnown RBP28.24■■■□□ 2.11
TRA2B-202ENST00000342294 TROQ12816 1431 aaPredicted RBP28.23■■■□□ 2.11
TRA2B-202ENST00000342294 REREQ9P2R6 1566 aa28.22■■■□□ 2.11
TRA2B-202ENST00000342294 DIP2CQ9Y2E4 1556 aa28.22■■■□□ 2.11
TRA2B-202ENST00000342294 ARHGAP5Q13017 1502 aa28.21■■■□□ 2.11
TRA2B-202ENST00000342294 ARHGAP35Q9NRY4 1499 aa28.2■■■□□ 2.1
TRA2B-202ENST00000342294 MLH3Q9UHC1 1453 aa28.19■■■□□ 2.1
TRA2B-202ENST00000342294 AGLP35573 1532 aa28.16■■■□□ 2.1
TRA2B-202ENST00000342294 MYT1LQ9UL68 1186 aa28.15■■■□□ 2.1
TRA2B-202ENST00000342294 CLIP1P30622 1438 aa28.14■■■□□ 2.1
TRA2B-202ENST00000342294 ABCA6Q8N139 1617 aa28.14■■■□□ 2.09
TRA2B-202ENST00000342294 TRAPPC8Q9Y2L5 1435 aa28.13■■■□□ 2.09
TRA2B-202ENST00000342294 UBTFP17480 764 aaKnown RBP28.13■■■□□ 2.09
TRA2B-202ENST00000342294 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
TRA2B-202ENST00000342294 C3P01024 1663 aa28.13■■■□□ 2.09
TRA2B-202ENST00000342294 CDC42BPBQ9Y5S2 1711 aa28.07■■■□□ 2.08
TRA2B-202ENST00000342294 ESF1Q9H501 851 aaKnown RBP28.07■■■□□ 2.08
TRA2B-202ENST00000342294 NCOA1Q15788 1441 aa28.07■■■□□ 2.08
TRA2B-202ENST00000342294 IQSEC2Q5JU85 1478 aa28.07■■■□□ 2.08
TRA2B-202ENST00000342294 EHMT2Q96KQ7 1210 aa28.06■■■□□ 2.08
TRA2B-202ENST00000342294 ABCC1P33527 1531 aa28.05■■■□□ 2.08
TRA2B-202ENST00000342294 SPATA31D1Q6ZQQ2 1576 aa28.05■■■□□ 2.08
TRA2B-202ENST00000342294 CNTLNQ9NXG0 1405 aa28.04■■■□□ 2.08
TRA2B-202ENST00000342294 LRRIQ1Q96JM4 1722 aa28.02■■■□□ 2.08
TRA2B-202ENST00000342294 PREX2Q70Z35 1606 aa28.01■■■□□ 2.07
TRA2B-202ENST00000342294 KIDINS220Q9ULH0 1771 aa27.99■■■□□ 2.07
TRA2B-202ENST00000342294 NPATQ14207 1427 aa27.98■■■□□ 2.07
TRA2B-202ENST00000342294 ITSN2Q9NZM3 1697 aa27.97■■■□□ 2.07
TRA2B-202ENST00000342294 CAMSAP1Q5T5Y3 1602 aa27.93■■■□□ 2.06
TRA2B-202ENST00000342294 ZMYM3Q14202 1370 aa27.93■■■□□ 2.06
TRA2B-202ENST00000342294 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
TRA2B-202ENST00000342294 CCDC18Q5T9S5 1454 aa27.91■■■□□ 2.06
TRA2B-202ENST00000342294 SAMD9LQ8IVG5 1584 aa27.9■■■□□ 2.06
TRA2B-202ENST00000342294 MROH2AA6NES4 1674 aa27.89■■■□□ 2.06
TRA2B-202ENST00000342294 NCKAP5LQ9HCH0 1330 aa27.89■■■□□ 2.05
TRA2B-202ENST00000342294 ZNF335Q9H4Z2 1342 aaPredicted RBP27.87■■■□□ 2.05
TRA2B-202ENST00000342294 CDC42BPAQ5VT25 1732 aa27.86■■■□□ 2.05
TRA2B-202ENST00000342294 SPAG9O60271 1321 aaKnown RBP27.85■■■□□ 2.05
TRA2B-202ENST00000342294 PLA2R1Q13018 1463 aa27.83■■■□□ 2.04
TRA2B-202ENST00000342294 PKD2Q13563 968 aa27.82■■■□□ 2.04
TRA2B-202ENST00000342294 ZNF777Q9ULD5 760 aaPredicted RBP27.82■■■□□ 2.04
TRA2B-202ENST00000342294 UBAP1LF5GYI3 381 aa27.81■■■□□ 2.04
TRA2B-202ENST00000342294 HNRNPMP52272 730 aaKnown RBP eCLIP27.81■■■□□ 2.041e-7■■■□□ 17.4
TRA2B-202ENST00000342294 GPATCH8Q9UKJ3 1502 aaKnown RBP27.81■■■□□ 2.04
TRA2B-202ENST00000342294 PTPRKQ15262 1439 aa27.8■■■□□ 2.04
TRA2B-202ENST00000342294 SYCP2Q9BX26 1530 aa27.8■■■□□ 2.04
TRA2B-202ENST00000342294 TCOF1Q13428 1488 aaKnown RBP27.79■■■□□ 2.04
TRA2B-202ENST00000342294 KIAA1107Q9UPP5 1409 aa27.77■■■□□ 2.04
TRA2B-202ENST00000342294 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
TRA2B-202ENST00000342294 ZNF142P52746 1687 aaPredicted RBP27.76■■■□□ 2.03
TRA2B-202ENST00000342294 ATP7AQ04656 1500 aa27.76■■■□□ 2.03
TRA2B-202ENST00000342294 SUPT6HQ7KZ85 1726 aaKnown RBP27.75■■■□□ 2.03
TRA2B-202ENST00000342294 A2MP01023 1474 aa27.75■■■□□ 2.03
TRA2B-202ENST00000342294 MYO3AQ8NEV4 1616 aa27.74■■■□□ 2.03
TRA2B-202ENST00000342294 FYCO1Q9BQS8 1478 aa27.74■■■□□ 2.03
TRA2B-202ENST00000342294 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
TRA2B-202ENST00000342294 CLTCQ00610 1675 aaKnown RBP27.73■■■□□ 2.03
TRA2B-202ENST00000342294 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
TRA2B-202ENST00000342294 INO80Q9ULG1 1556 aaPredicted RBP27.72■■■□□ 2.03
TRA2B-202ENST00000342294 GGT6Q6P531 493 aa27.71■■■□□ 2.03
TRA2B-202ENST00000342294 PPP6R1Q9UPN7 881 aa27.71■■■□□ 2.03
TRA2B-202ENST00000342294 PLEKHH2Q8IVE3 1493 aa27.7■■■□□ 2.03
TRA2B-202ENST00000342294 CFDP1Q9UEE9 299 aaPredicted RBP27.69■■■□□ 2.02
TRA2B-202ENST00000342294 A2ML1A8K2U0 1454 aa27.64■■■□□ 2.01
TRA2B-202ENST00000342294 CCNB3Q8WWL7 1395 aa27.62■■■□□ 2.01
TRA2B-202ENST00000342294 DNMT1P26358 1616 aaKnown RBP27.59■■■□□ 2.01
TRA2B-202ENST00000342294 HSPA1LP34931 641 aa27.58■■■□□ 2.01
TRA2B-202ENST00000342294 ZNF644Q9H582 1327 aaPredicted RBP27.57■■■□□ 2
TRA2B-202ENST00000342294 MBD5Q9P267 1494 aa27.56■■■□□ 2
TRA2B-202ENST00000342294 ADGBQ8N7X0 1667 aa27.56■■■□□ 2
TRA2B-202ENST00000342294 RTEL1-TNFRSF6BF6WH68 1400 aa27.54■■■□□ 2
TRA2B-202ENST00000342294 CPS1P31327 1500 aa27.53■■■□□ 2
TRA2B-202ENST00000342294 DHX29Q7Z478 1369 aaKnown RBP27.53■■■□□ 2
TRA2B-202ENST00000342294 TOM1O60784 492 aa27.53■■■□□ 2
TRA2B-202ENST00000342294 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
TRA2B-202ENST00000342294 FBXO31Q5XUX0 539 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms