RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
TMEM220-201ENST00000341871 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
TMEM220-201ENST00000341871 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
TMEM220-201ENST00000341871 HFM1A2PYH4 1435 aa16.76■□□□□ 0.27
TMEM220-201ENST00000341871 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
TMEM220-201ENST00000341871 RTL5Q5HYW3 569 aaPredicted RBP16.75■□□□□ 0.27
TMEM220-201ENST00000341871 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
TMEM220-201ENST00000341871 UACAQ9BZF9 1416 aa16.74■□□□□ 0.27
TMEM220-201ENST00000341871 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
TMEM220-201ENST00000341871 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
TMEM220-201ENST00000341871 KDM2AQ9Y2K7 1162 aa16.72■□□□□ 0.27
TMEM220-201ENST00000341871 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
TMEM220-201ENST00000341871 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
TMEM220-201ENST00000341871 PTPN23Q9H3S7 1636 aa16.7■□□□□ 0.26
TMEM220-201ENST00000341871 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
TMEM220-201ENST00000341871 SUPT6HQ7KZ85 1726 aaKnown RBP16.69■□□□□ 0.26
TMEM220-201ENST00000341871 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
TMEM220-201ENST00000341871 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
TMEM220-201ENST00000341871 HNRNPUQ00839 825 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM220-201ENST00000341871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM220-201ENST00000341871 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM220-201ENST00000341871 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
TMEM220-201ENST00000341871 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
TMEM220-201ENST00000341871 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
TMEM220-201ENST00000341871 EIF4G2P78344 907 aaKnown RBP eCLIP16.67■□□□□ 0.26
TMEM220-201ENST00000341871 UGGT2Q9NYU1 1516 aa16.66■□□□□ 0.26
TMEM220-201ENST00000341871 KDM6BO15054 1643 aa16.65■□□□□ 0.26
TMEM220-201ENST00000341871 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
TMEM220-201ENST00000341871 TIMELESSQ9UNS1 1208 aa16.65■□□□□ 0.26
TMEM220-201ENST00000341871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.65■□□□□ 0.26
TMEM220-201ENST00000341871 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
TMEM220-201ENST00000341871 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
TMEM220-201ENST00000341871 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
TMEM220-201ENST00000341871 PKD2Q13563 968 aa16.64■□□□□ 0.25
TMEM220-201ENST00000341871 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
TMEM220-201ENST00000341871 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
TMEM220-201ENST00000341871 FANCIQ9NVI1 1328 aa16.63■□□□□ 0.25
TMEM220-201ENST00000341871 DISP1Q96F81 1524 aa16.63■□□□□ 0.25
TMEM220-201ENST00000341871 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
TMEM220-201ENST00000341871 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
TMEM220-201ENST00000341871 CCDC184Q52MB2 194 aa16.62■□□□□ 0.25
TMEM220-201ENST00000341871 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
TMEM220-201ENST00000341871 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
TMEM220-201ENST00000341871 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
TMEM220-201ENST00000341871 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
TMEM220-201ENST00000341871 WDR62O43379 1518 aa16.59■□□□□ 0.25
TMEM220-201ENST00000341871 ABCC5O15440 1437 aa16.58■□□□□ 0.25
TMEM220-201ENST00000341871 DAPK1P53355 1430 aa16.58■□□□□ 0.25
TMEM220-201ENST00000341871 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
TMEM220-201ENST00000341871 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
TMEM220-201ENST00000341871 KIAA0556O60303 1618 aa16.53■□□□□ 0.24
TMEM220-201ENST00000341871 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
TMEM220-201ENST00000341871 NUP155O75694 1391 aa16.53■□□□□ 0.24
TMEM220-201ENST00000341871 GLIPR1L2Q4G1C9 344 aa16.52■□□□□ 0.24
TMEM220-201ENST00000341871 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.23
TMEM220-201ENST00000341871 MIA2Q96PC5 1412 aa16.52■□□□□ 0.23
TMEM220-201ENST00000341871 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
TMEM220-201ENST00000341871 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
TMEM220-201ENST00000341871 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
TMEM220-201ENST00000341871 TROQ12816 1431 aaPredicted RBP16.5■□□□□ 0.23
TMEM220-201ENST00000341871 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
TMEM220-201ENST00000341871 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
TMEM220-201ENST00000341871 PTPRGP23470 1445 aa16.48■□□□□ 0.23
TMEM220-201ENST00000341871 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
TMEM220-201ENST00000341871 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
TMEM220-201ENST00000341871 CCER2I3L3R5 266 aa16.47■□□□□ 0.23
TMEM220-201ENST00000341871 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
TMEM220-201ENST00000341871 ANKRD30BQ9BXX2 1392 aa16.46■□□□□ 0.23
TMEM220-201ENST00000341871 A0A0U1RQG5 324 aaPredicted RBP16.45■□□□□ 0.22
TMEM220-201ENST00000341871 CARD11Q9BXL7 1154 aa16.45■□□□□ 0.22
TMEM220-201ENST00000341871 KIF14Q15058 1648 aa16.45■□□□□ 0.22
TMEM220-201ENST00000341871 GPATCH8Q9UKJ3 1502 aaKnown RBP16.45■□□□□ 0.22
TMEM220-201ENST00000341871 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
TMEM220-201ENST00000341871 KIF7Q2M1P5 1343 aa16.44■□□□□ 0.22
TMEM220-201ENST00000341871 ANKRD30AQ9BXX3 1397 aa16.44■□□□□ 0.22
TMEM220-201ENST00000341871 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
TMEM220-201ENST00000341871 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
TMEM220-201ENST00000341871 NCOA1Q15788 1441 aa16.43■□□□□ 0.22
TMEM220-201ENST00000341871 ANKRD50Q9ULJ7 1429 aa16.42■□□□□ 0.22
TMEM220-201ENST00000341871 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
TMEM220-201ENST00000341871 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
TMEM220-201ENST00000341871 ATP10BO94823 1461 aa16.4■□□□□ 0.22
TMEM220-201ENST00000341871 AKNAQ7Z591 1439 aa16.4■□□□□ 0.22
TMEM220-201ENST00000341871 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
TMEM220-201ENST00000341871 KDM5BQ9UGL1 1544 aa16.39■□□□□ 0.21
TMEM220-201ENST00000341871 KIF15Q9NS87 1388 aa16.38■□□□□ 0.21
TMEM220-201ENST00000341871 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
TMEM220-201ENST00000341871 ROCK1Q13464 1354 aa16.36■□□□□ 0.21
TMEM220-201ENST00000341871 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
TMEM220-201ENST00000341871 USP47Q96K76 1375 aa16.36■□□□□ 0.21
TMEM220-201ENST00000341871 RPRD2Q5VT52 1461 aaKnown RBP16.34■□□□□ 0.21
TMEM220-201ENST00000341871 NUP160Q12769 1436 aa16.33■□□□□ 0.21
TMEM220-201ENST00000341871 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.21
TMEM220-201ENST00000341871 PZPP20742 1482 aa16.33■□□□□ 0.2
TMEM220-201ENST00000341871 NBPF1Q3BBV0 1214 aa16.33■□□□□ 0.2
TMEM220-201ENST00000341871 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
TMEM220-201ENST00000341871 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
TMEM220-201ENST00000341871 DNMT1P26358 1616 aaKnown RBP16.31■□□□□ 0.2
TMEM220-201ENST00000341871 AFAP1Q8N556 730 aa16.31■□□□□ 0.2
TMEM220-201ENST00000341871 KIAA1107Q9UPP5 1409 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms