RNA–Protein interactions for RNA: ENST00000341369.11

PTMA-201, Transcript of prothymosin alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTMA, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-201ENST00000341369 LMTK3Q96Q04 1460 aa17.12■□□□□ 0.33
PTMA-201ENST00000341369 BCORL1Q5H9F3 1711 aa17.12■□□□□ 0.33
PTMA-201ENST00000341369 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
PTMA-201ENST00000341369 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
PTMA-201ENST00000341369 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
PTMA-201ENST00000341369 FRMPD1Q5SYB0 1578 aa17.05■□□□□ 0.32
PTMA-201ENST00000341369 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
PTMA-201ENST00000341369 HSPA2P54652 639 aa17.03■□□□□ 0.32
PTMA-201ENST00000341369 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
PTMA-201ENST00000341369 RIMS1Q86UR5 1692 aaKnown RBP17.03■□□□□ 0.32
PTMA-201ENST00000341369 RAPGEF6Q8TEU7 1601 aa17.03■□□□□ 0.32
PTMA-201ENST00000341369 ARHGEF40Q8TER5 1519 aa17.02■□□□□ 0.32
PTMA-201ENST00000341369 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
PTMA-201ENST00000341369 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
PTMA-201ENST00000341369 FANCAO15360 1455 aa17■□□□□ 0.31
PTMA-201ENST00000341369 AKNAQ7Z591 1439 aa17■□□□□ 0.31
PTMA-201ENST00000341369 SAMD9Q5K651 1589 aa16.99■□□□□ 0.31
PTMA-201ENST00000341369 FHOD3Q2V2M9 1422 aa16.99■□□□□ 0.31
PTMA-201ENST00000341369 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
PTMA-201ENST00000341369 CFAP74Q9C0B2 1584 aa16.97■□□□□ 0.31
PTMA-201ENST00000341369 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
PTMA-201ENST00000341369 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
PTMA-201ENST00000341369 KCNA4P22459 653 aa16.95■□□□□ 0.3
PTMA-201ENST00000341369 MAGI2Q86UL8 1455 aa16.94■□□□□ 0.3
PTMA-201ENST00000341369 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
PTMA-201ENST00000341369 ZMYM4Q5VZL5 1548 aa16.93■□□□□ 0.3
PTMA-201ENST00000341369 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
PTMA-201ENST00000341369 MLECQ14165 292 aa16.92■□□□□ 0.3
PTMA-201ENST00000341369 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
PTMA-201ENST00000341369 YEATS2Q9ULM3 1422 aa16.9■□□□□ 0.3
PTMA-201ENST00000341369 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.3
PTMA-201ENST00000341369 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
PTMA-201ENST00000341369 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.295e-9■■■■□ 20.9
PTMA-201ENST00000341369 POLA2Q14181 598 aa16.88■□□□□ 0.29
PTMA-201ENST00000341369 TTC37Q6PGP7 1564 aa16.88■□□□□ 0.29
PTMA-201ENST00000341369 FER1L4A9Z1Z3 1794 aa16.87■□□□□ 0.29
PTMA-201ENST00000341369 SOCS7O14512 581 aa16.86■□□□□ 0.29
PTMA-201ENST00000341369 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
PTMA-201ENST00000341369 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
PTMA-201ENST00000341369 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
PTMA-201ENST00000341369 ATP10AO60312 1499 aa16.83■□□□□ 0.28
PTMA-201ENST00000341369 PREX1Q8TCU6 1659 aa16.82■□□□□ 0.28
PTMA-201ENST00000341369 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
PTMA-201ENST00000341369 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
PTMA-201ENST00000341369 PLCH2O75038 1416 aa16.81■□□□□ 0.28
PTMA-201ENST00000341369 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
PTMA-201ENST00000341369 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
PTMA-201ENST00000341369 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
PTMA-201ENST00000341369 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
PTMA-201ENST00000341369 EEA1Q15075 1411 aa16.77■□□□□ 0.27
PTMA-201ENST00000341369 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
PTMA-201ENST00000341369 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
PTMA-201ENST00000341369 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
PTMA-201ENST00000341369 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
PTMA-201ENST00000341369 STRCQ7RTU9 1775 aa16.74■□□□□ 0.27
PTMA-201ENST00000341369 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
PTMA-201ENST00000341369 PTPRTO14522 1441 aa16.72■□□□□ 0.27
PTMA-201ENST00000341369 ESF1Q9H501 851 aaKnown RBP16.72■□□□□ 0.27
PTMA-201ENST00000341369 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
PTMA-201ENST00000341369 SETD1BQ9UPS6 1966 aaKnown RBP16.71■□□□□ 0.27
PTMA-201ENST00000341369 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
PTMA-201ENST00000341369 SPATA31D1Q6ZQQ2 1576 aa16.7■□□□□ 0.26
PTMA-201ENST00000341369 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
PTMA-201ENST00000341369 AFAP1Q8N556 730 aa16.69■□□□□ 0.26
PTMA-201ENST00000341369 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
PTMA-201ENST00000341369 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
PTMA-201ENST00000341369 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
PTMA-201ENST00000341369 KDM5CP41229 1560 aa16.66■□□□□ 0.26
PTMA-201ENST00000341369 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
PTMA-201ENST00000341369 CLIP1P30622 1438 aa16.64■□□□□ 0.25
PTMA-201ENST00000341369 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
PTMA-201ENST00000341369 KIF14Q15058 1648 aa16.64■□□□□ 0.25
PTMA-201ENST00000341369 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
PTMA-201ENST00000341369 C3P01024 1663 aa16.62■□□□□ 0.25
PTMA-201ENST00000341369 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
PTMA-201ENST00000341369 LTBP4Q8N2S1 1624 aa16.62■□□□□ 0.25
PTMA-201ENST00000341369 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
PTMA-201ENST00000341369 CNTLNQ9NXG0 1405 aa16.61■□□□□ 0.25
PTMA-201ENST00000341369 AGLP35573 1532 aa16.6■□□□□ 0.25
PTMA-201ENST00000341369 PIP4P2Q8N4L2 257 aa16.6■□□□□ 0.25
PTMA-201ENST00000341369 NCOA1Q15788 1441 aa16.6■□□□□ 0.25
PTMA-201ENST00000341369 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
PTMA-201ENST00000341369 ABCA6Q8N139 1617 aa16.58■□□□□ 0.24
PTMA-201ENST00000341369 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
PTMA-201ENST00000341369 NPATQ14207 1427 aa16.54■□□□□ 0.24
PTMA-201ENST00000341369 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
PTMA-201ENST00000341369 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
PTMA-201ENST00000341369 CAMSAP1Q5T5Y3 1602 aa16.53■□□□□ 0.24
PTMA-201ENST00000341369 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
PTMA-201ENST00000341369 ABCC1P33527 1531 aa16.52■□□□□ 0.24
PTMA-201ENST00000341369 HAX1O00165 279 aa16.52■□□□□ 0.24
PTMA-201ENST00000341369 CDC42BPBQ9Y5S2 1711 aa16.52■□□□□ 0.24
PTMA-201ENST00000341369 ZMYM3Q14202 1370 aa16.51■□□□□ 0.23
PTMA-201ENST00000341369 PREX2Q70Z35 1606 aa16.5■□□□□ 0.23
PTMA-201ENST00000341369 ZNF335Q9H4Z2 1342 aaPredicted RBP16.49■□□□□ 0.23
PTMA-201ENST00000341369 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
PTMA-201ENST00000341369 PKD2Q13563 968 aa16.49■□□□□ 0.23
PTMA-201ENST00000341369 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
PTMA-201ENST00000341369 MROH2AA6NES4 1674 aa16.49■□□□□ 0.23
PTMA-201ENST00000341369 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms