RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 TRIM52Q96A61 297 aa28.71■■■□□ 2.19
SPG7-202ENST00000341316 KDM5BQ9UGL1 1544 aa28.7■■■□□ 2.18
SPG7-202ENST00000341316 DDX10Q13206 875 aaKnown RBP28.69■■■□□ 2.18
SPG7-202ENST00000341316 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
SPG7-202ENST00000341316 ROCK1Q13464 1354 aa28.66■■■□□ 2.18
SPG7-202ENST00000341316 MPHOSPH9Q99550 1183 aa28.64■■■□□ 2.18
SPG7-202ENST00000341316 KIF14Q15058 1648 aa28.64■■■□□ 2.17
SPG7-202ENST00000341316 KCNH8Q96L42 1107 aa28.62■■■□□ 2.17
SPG7-202ENST00000341316 GPATCH8Q9UKJ3 1502 aaKnown RBP28.61■■■□□ 2.17
SPG7-202ENST00000341316 CAMSAP2Q08AD1 1489 aa28.58■■■□□ 2.17
SPG7-202ENST00000341316 FOXD1Q16676 465 aa28.58■■■□□ 2.17
SPG7-202ENST00000341316 CFDP1Q9UEE9 299 aaPredicted RBP28.58■■■□□ 2.17
SPG7-202ENST00000341316 ADCY10Q96PN6 1610 aa28.58■■■□□ 2.17
SPG7-202ENST00000341316 ABCA8O94911 1581 aa28.58■■■□□ 2.17
SPG7-202ENST00000341316 ITSN2Q9NZM3 1697 aa28.54■■■□□ 2.16
SPG7-202ENST00000341316 ATP10BO94823 1461 aa28.52■■■□□ 2.16
SPG7-202ENST00000341316 ZNF777Q9ULD5 760 aaPredicted RBP28.5■■■□□ 2.15
SPG7-202ENST00000341316 PLEKHD1A6NEE1 506 aa28.46■■■□□ 2.15
SPG7-202ENST00000341316 ANKRD30BQ9BXX2 1392 aa28.46■■■□□ 2.15
SPG7-202ENST00000341316 NCOA1Q15788 1441 aa28.46■■■□□ 2.15
SPG7-202ENST00000341316 ABCC10Q5T3U5 1492 aa28.44■■■□□ 2.14
SPG7-202ENST00000341316 L3MBTL2Q969R5 705 aa28.44■■■□□ 2.14
SPG7-202ENST00000341316 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
SPG7-202ENST00000341316 CROCC2H7BZ55 1655 aa28.4■■■□□ 2.14
SPG7-202ENST00000341316 CDC42BPAQ5VT25 1732 aa28.4■■■□□ 2.14
SPG7-202ENST00000341316 ADGBQ8N7X0 1667 aa28.4■■■□□ 2.14
SPG7-202ENST00000341316 ADGRL2O95490 1459 aa28.4■■■□□ 2.14
SPG7-202ENST00000341316 SUPT16HQ9Y5B9 1047 aaKnown RBP28.4■■■□□ 2.14
SPG7-202ENST00000341316 PTPRGP23470 1445 aa28.4■■■□□ 2.14
SPG7-202ENST00000341316 PZPP20742 1482 aa28.38■■■□□ 2.13
SPG7-202ENST00000341316 RPRD2Q5VT52 1461 aaKnown RBP28.38■■■□□ 2.13
SPG7-202ENST00000341316 CHD1O14646 1710 aa28.38■■■□□ 2.13
SPG7-202ENST00000341316 MYT1Q01538 1121 aa28.36■■■□□ 2.13
SPG7-202ENST00000341316 HSPA5P11021 654 aaKnown RBP28.35■■■□□ 2.13
SPG7-202ENST00000341316 TEX14Q8IWB6 1497 aa28.32■■■□□ 2.12
SPG7-202ENST00000341316 ANP32CO43423 234 aa28.32■■■□□ 2.12
SPG7-202ENST00000341316 ANKRD30AQ9BXX3 1397 aa28.32■■■□□ 2.12
SPG7-202ENST00000341316 NBPF8Q3BBV2 869 aa28.29■■■□□ 2.12
SPG7-202ENST00000341316 CCER2I3L3R5 266 aa28.27■■■□□ 2.12
SPG7-202ENST00000341316 WASHC2AQ641Q2 1341 aa28.27■■■□□ 2.12
SPG7-202ENST00000341316 EIF4G2P78344 907 aaKnown RBP eCLIP28.26■■■□□ 2.11
SPG7-202ENST00000341316 C9orf84Q5VXU9 1444 aa28.26■■■□□ 2.11
SPG7-202ENST00000341316 ANKRD50Q9ULJ7 1429 aa28.26■■■□□ 2.11
SPG7-202ENST00000341316 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
SPG7-202ENST00000341316 SHANK2Q9UPX8 1470 aa28.24■■■□□ 2.11
SPG7-202ENST00000341316 HNRNPMP52272 730 aaKnown RBP eCLIP28.22■■■□□ 2.112e-7■■■■□ 24.8
SPG7-202ENST00000341316 ERCC6L2Q5T890 1561 aa28.21■■■□□ 2.11
SPG7-202ENST00000341316 KIAA1107Q9UPP5 1409 aa28.21■■■□□ 2.11
SPG7-202ENST00000341316 PKD2Q13563 968 aa28.19■■■□□ 2.1
SPG7-202ENST00000341316 MBD5Q9P267 1494 aa28.19■■■□□ 2.1
SPG7-202ENST00000341316 C11orf95C9JLR9 678 aaPredicted RBP28.17■■■□□ 2.1
SPG7-202ENST00000341316 TSPY4P0CV99 314 aa28.16■■■□□ 2.1
SPG7-202ENST00000341316 TSPY10P0CW01 314 aa28.16■■■□□ 2.1
SPG7-202ENST00000341316 CDC42BPBQ9Y5S2 1711 aa28.15■■■□□ 2.1
SPG7-202ENST00000341316 SAMD9LQ8IVG5 1584 aa28.15■■■□□ 2.1
SPG7-202ENST00000341316 ARHGEF5Q12774 1597 aa28.15■■■□□ 2.1
SPG7-202ENST00000341316 PREX2Q70Z35 1606 aa28.13■■■□□ 2.09
SPG7-202ENST00000341316 NUP155O75694 1391 aa28.13■■■□□ 2.09
SPG7-202ENST00000341316 KIF15Q9NS87 1388 aa28.11■■■□□ 2.09
SPG7-202ENST00000341316 SPATA31E1Q6ZUB1 1445 aa28.1■■■□□ 2.09
SPG7-202ENST00000341316 TTC37Q6PGP7 1564 aa28.08■■■□□ 2.09
SPG7-202ENST00000341316 ABCC2Q92887 1545 aa28.07■■■□□ 2.08
SPG7-202ENST00000341316 CCDC141Q6ZP82 1450 aa28.07■■■□□ 2.08
SPG7-202ENST00000341316 CCDC7Q96M83 1385 aa28.07■■■□□ 2.08
SPG7-202ENST00000341316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.06■■■□□ 2.08
SPG7-202ENST00000341316 KDM5DQ9BY66 1539 aa28.05■■■□□ 2.08
SPG7-202ENST00000341316 CNTLNQ9NXG0 1405 aa28.04■■■□□ 2.08
SPG7-202ENST00000341316 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.07
SPG7-202ENST00000341316 ARHGAP5Q13017 1502 aa28■■■□□ 2.07
SPG7-202ENST00000341316 CLASP1Q7Z460 1538 aa27.99■■■□□ 2.07
SPG7-202ENST00000341316 KIF7Q2M1P5 1343 aa27.98■■■□□ 2.07
SPG7-202ENST00000341316 RSPH4AQ5TD94 716 aa27.98■■■□□ 2.07
SPG7-202ENST00000341316 TSHZ2Q9NRE2 1034 aa27.98■■■□□ 2.07
SPG7-202ENST00000341316 ZNF326Q5BKZ1 582 aaKnown RBP27.97■■■□□ 2.07
SPG7-202ENST00000341316 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
SPG7-202ENST00000341316 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
SPG7-202ENST00000341316 MAST1Q9Y2H9 1570 aa27.91■■■□□ 2.06
SPG7-202ENST00000341316 ZCCHC11Q5TAX3 1644 aaKnown RBP27.9■■■□□ 2.06
SPG7-202ENST00000341316 USP47Q96K76 1375 aa27.9■■■□□ 2.06
SPG7-202ENST00000341316 UHRF1BP1Q6BDS2 1440 aa27.9■■■□□ 2.06
SPG7-202ENST00000341316 POLR1AO95602 1720 aaPredicted RBP27.89■■■□□ 2.06
SPG7-202ENST00000341316 CCDC184Q52MB2 194 aa27.89■■■□□ 2.05
SPG7-202ENST00000341316 BCANQ96GW7 911 aa27.88■■■□□ 2.05
SPG7-202ENST00000341316 ARHGEF12Q9NZN5 1544 aa27.88■■■□□ 2.05
SPG7-202ENST00000341316 PRKRIP1Q9H875 184 aaPredicted RBP27.87■■■□□ 2.05
SPG7-202ENST00000341316 FKBP8Q14318 412 aa27.87■■■□□ 2.05
SPG7-202ENST00000341316 UHRF1BP1LA0JNW5 1464 aa27.86■■■□□ 2.05
SPG7-202ENST00000341316 BCORL1Q5H9F3 1711 aa27.85■■■□□ 2.05
SPG7-202ENST00000341316 KDM5CP41229 1560 aa27.85■■■□□ 2.05
SPG7-202ENST00000341316 RALGAPBQ86X10 1494 aa27.83■■■□□ 2.05
SPG7-202ENST00000341316 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
SPG7-202ENST00000341316 PLCH2O75038 1416 aa27.83■■■□□ 2.05
SPG7-202ENST00000341316 KDM2AQ9Y2K7 1162 aa27.81■■■□□ 2.04
SPG7-202ENST00000341316 UNC13BO14795 1591 aa27.81■■■□□ 2.04
SPG7-202ENST00000341316 PLXNC1O60486 1568 aa27.81■■■□□ 2.04
SPG7-202ENST00000341316 HNRNPUQ00839 825 aaKnown RBP eCLIP27.8■■■□□ 2.04
SPG7-202ENST00000341316 DCAF11Q8TEB1 546 aa27.79■■■□□ 2.04
SPG7-202ENST00000341316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.79■■■□□ 2.044e-9■■■■□ 20.4
SPG7-202ENST00000341316 PLA2R1Q13018 1463 aa27.76■■■□□ 2.04
SPG7-202ENST00000341316 CARD11Q9BXL7 1154 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms