RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 G3V3G9 751 aa17.45■□□□□ 0.38
PDE4D-203ENST00000340635 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
PDE4D-203ENST00000340635 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
PDE4D-203ENST00000340635 APBB1O00213 710 aa17.43■□□□□ 0.38
PDE4D-203ENST00000340635 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
PDE4D-203ENST00000340635 RRP7BPQ9NSQ0 103 aa17.43■□□□□ 0.38
PDE4D-203ENST00000340635 CSPP1Q1MSJ5 1256 aa17.43■□□□□ 0.38
PDE4D-203ENST00000340635 KCNH8Q96L42 1107 aa17.43■□□□□ 0.38
PDE4D-203ENST00000340635 ABCC9O60706 1549 aa17.42■□□□□ 0.38
PDE4D-203ENST00000340635 PES1O00541 588 aaKnown RBP17.42■□□□□ 0.38
PDE4D-203ENST00000340635 MARCH6O60337 910 aa17.42■□□□□ 0.38
PDE4D-203ENST00000340635 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
PDE4D-203ENST00000340635 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
PDE4D-203ENST00000340635 TSR1Q2NL82 804 aaKnown RBP17.41■□□□□ 0.38
PDE4D-203ENST00000340635 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
PDE4D-203ENST00000340635 ZNF330Q9Y3S2 320 aaPredicted RBP17.41■□□□□ 0.38
PDE4D-203ENST00000340635 CC2D1BQ5T0F9 858 aaKnown RBP17.41■□□□□ 0.38
PDE4D-203ENST00000340635 SOX12O15370 315 aa17.4■□□□□ 0.38
PDE4D-203ENST00000340635 CCDC70Q6NSX1 233 aa17.4■□□□□ 0.38
PDE4D-203ENST00000340635 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
PDE4D-203ENST00000340635 GPATCH3Q96I76 525 aa17.4■□□□□ 0.38
PDE4D-203ENST00000340635 TPD52L1Q16890 204 aaPredicted RBP17.38■□□□□ 0.37
PDE4D-203ENST00000340635 PHF14O94880 888 aa17.36■□□□□ 0.37
PDE4D-203ENST00000340635 GPS2Q13227 327 aa17.36■□□□□ 0.37
PDE4D-203ENST00000340635 CCAR2Q8N163 923 aaKnown RBP17.36■□□□□ 0.37
PDE4D-203ENST00000340635 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
PDE4D-203ENST00000340635 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
PDE4D-203ENST00000340635 TAF7LQ5H9L4 462 aa17.35■□□□□ 0.37
PDE4D-203ENST00000340635 TPM2P07951 284 aa17.35■□□□□ 0.37
PDE4D-203ENST00000340635 B4GALNT3Q6L9W6 998 aa17.34■□□□□ 0.37
PDE4D-203ENST00000340635 TCEAL9Q9UHQ7 104 aa17.33■□□□□ 0.36
PDE4D-203ENST00000340635 GOLGA6L3A6NEY3 463 aa17.32■□□□□ 0.36
PDE4D-203ENST00000340635 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
PDE4D-203ENST00000340635 HSP90AA2PQ14568 343 aaPredicted RBP17.31■□□□□ 0.36
PDE4D-203ENST00000340635 TPM1P09493 284 aa17.3■□□□□ 0.36
PDE4D-203ENST00000340635 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
PDE4D-203ENST00000340635 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
PDE4D-203ENST00000340635 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
PDE4D-203ENST00000340635 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
PDE4D-203ENST00000340635 TOMM22Q9NS69 142 aa17.27■□□□□ 0.35
PDE4D-203ENST00000340635 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.26■□□□□ 0.35
PDE4D-203ENST00000340635 ZNF771Q7L3S4 317 aaPredicted RBP17.26■□□□□ 0.35
PDE4D-203ENST00000340635 SRPK2P78362 688 aaKnown RBP17.26■□□□□ 0.35
PDE4D-203ENST00000340635 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
PDE4D-203ENST00000340635 KIF3AQ9Y496 699 aa17.25■□□□□ 0.35
PDE4D-203ENST00000340635 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
PDE4D-203ENST00000340635 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDE4D-203ENST00000340635 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
PDE4D-203ENST00000340635 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
PDE4D-203ENST00000340635 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
PDE4D-203ENST00000340635 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
PDE4D-203ENST00000340635 HDGFP51858 240 aaKnown RBP17.23■□□□□ 0.35
PDE4D-203ENST00000340635 GOLGA6L19H0YKK7 550 aa17.23■□□□□ 0.35
PDE4D-203ENST00000340635 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
PDE4D-203ENST00000340635 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
PDE4D-203ENST00000340635 HMMRO75330 724 aa17.22■□□□□ 0.35
PDE4D-203ENST00000340635 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
PDE4D-203ENST00000340635 PCMTD1Q96MG8 357 aaPredicted RBP17.21■□□□□ 0.35
PDE4D-203ENST00000340635 TEX35Q5T0J7 233 aa17.21■□□□□ 0.35
PDE4D-203ENST00000340635 H3BQV1 296 aa17.21■□□□□ 0.35
PDE4D-203ENST00000340635 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
PDE4D-203ENST00000340635 IFFO2Q5TF58 517 aa17.21■□□□□ 0.35
PDE4D-203ENST00000340635 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
PDE4D-203ENST00000340635 RBM19Q9Y4C8 960 aaKnown RBP17.21■□□□□ 0.34
PDE4D-203ENST00000340635 TMF1P82094 1093 aa17.2■□□□□ 0.34
PDE4D-203ENST00000340635 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
PDE4D-203ENST00000340635 IPO7O95373 1038 aaKnown RBP17.19■□□□□ 0.34
PDE4D-203ENST00000340635 TCERG1O14776 1098 aaKnown RBP17.19■□□□□ 0.34
PDE4D-203ENST00000340635 CTDP1Q9Y5B0 961 aaPredicted RBP17.19■□□□□ 0.34
PDE4D-203ENST00000340635 MFAP1P55081 439 aaKnown RBP17.19■□□□□ 0.34
PDE4D-203ENST00000340635 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
PDE4D-203ENST00000340635 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
PDE4D-203ENST00000340635 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
PDE4D-203ENST00000340635 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
PDE4D-203ENST00000340635 SPAG9O60271 1321 aaKnown RBP17.17■□□□□ 0.34
PDE4D-203ENST00000340635 RUFY1Q96T51 708 aa17.17■□□□□ 0.34
PDE4D-203ENST00000340635 CDR1P51861 262 aa17.17■□□□□ 0.34
PDE4D-203ENST00000340635 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
PDE4D-203ENST00000340635 TRIM34Q9BYJ4 488 aa17.16■□□□□ 0.34
PDE4D-203ENST00000340635 BECN2A8MW95 431 aa17.15■□□□□ 0.34
PDE4D-203ENST00000340635 NOM1Q5C9Z4 860 aaKnown RBP17.15■□□□□ 0.34
PDE4D-203ENST00000340635 AK7Q96M32 723 aa17.15■□□□□ 0.34
PDE4D-203ENST00000340635 ODF2Q5BJF6 829 aa17.15■□□□□ 0.34
PDE4D-203ENST00000340635 ST18O60284 1047 aa17.15■□□□□ 0.34
PDE4D-203ENST00000340635 ZNF592Q92610 1267 aa17.15■□□□□ 0.34
PDE4D-203ENST00000340635 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
PDE4D-203ENST00000340635 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
PDE4D-203ENST00000340635 VSIG10Q8N0Z9 540 aa17.14■□□□□ 0.33
PDE4D-203ENST00000340635 FOXD4L5Q5VV16 416 aaPredicted RBP17.13■□□□□ 0.33
PDE4D-203ENST00000340635 ANKRD20A12PQ8NF67 263 aa17.13■□□□□ 0.33
PDE4D-203ENST00000340635 FOXD4L4Q8WXT5 416 aaPredicted RBP17.13■□□□□ 0.33
PDE4D-203ENST00000340635 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
PDE4D-203ENST00000340635 KANK1Q14678 1352 aa17.13■□□□□ 0.33
PDE4D-203ENST00000340635 RAD21O60216 631 aa17.13■□□□□ 0.33
PDE4D-203ENST00000340635 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
PDE4D-203ENST00000340635 CT47A1Q5JQC4 288 aaPredicted RBP17.13■□□□□ 0.33
PDE4D-203ENST00000340635 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDE4D-203ENST00000340635 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
PDE4D-203ENST00000340635 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
PDE4D-203ENST00000340635 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms