RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ST20-MTHFSA0A0A6YYL1 179 aa19.39■□□□□ 0.69
RET-201ENST00000340058 ARXQ96QS3 562 aa19.38■□□□□ 0.69
RET-201ENST00000340058 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
RET-201ENST00000340058 SRPK2P78362 688 aaKnown RBP19.36■□□□□ 0.69
RET-201ENST00000340058 RGS3P49796 1198 aa19.36■□□□□ 0.69
RET-201ENST00000340058 CCDC18Q5T9S5 1454 aa19.35■□□□□ 0.69
RET-201ENST00000340058 PTPRGP23470 1445 aa19.35■□□□□ 0.69
RET-201ENST00000340058 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
RET-201ENST00000340058 CUX1P39880 1505 aa19.34■□□□□ 0.69
RET-201ENST00000340058 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
RET-201ENST00000340058 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
RET-201ENST00000340058 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.69
RET-201ENST00000340058 HSP90AA1P07900 732 aaKnown RBP19.32■□□□□ 0.68
RET-201ENST00000340058 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
RET-201ENST00000340058 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
RET-201ENST00000340058 PRXQ9BXM0 1461 aa19.31■□□□□ 0.68
RET-201ENST00000340058 FGD6Q6ZV73 1430 aa19.3■□□□□ 0.68
RET-201ENST00000340058 KANK1Q14678 1352 aa19.3■□□□□ 0.68
RET-201ENST00000340058 A0A0G2JS52 829 aa19.29■□□□□ 0.68
RET-201ENST00000340058 LRRC9Q6ZRR7 1453 aa19.29■□□□□ 0.68
RET-201ENST00000340058 UPF2Q9HAU5 1272 aaKnown RBP19.29■□□□□ 0.68
RET-201ENST00000340058 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
RET-201ENST00000340058 MORC1Q86VD1 984 aa19.27■□□□□ 0.68
RET-201ENST00000340058 TRAK1Q9UPV9 953 aa19.25■□□□□ 0.67
RET-201ENST00000340058 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
RET-201ENST00000340058 MAPK8IP3Q9UPT6 1336 aa19.23■□□□□ 0.67
RET-201ENST00000340058 NUTM2FA1L443 756 aa19.23■□□□□ 0.67
RET-201ENST00000340058 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
RET-201ENST00000340058 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
RET-201ENST00000340058 WASHC2CQ9Y4E1 1318 aa19.21■□□□□ 0.67
RET-201ENST00000340058 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
RET-201ENST00000340058 MYOM3Q5VTT5 1437 aa19.21■□□□□ 0.67
RET-201ENST00000340058 FTSJ3Q8IY81 847 aaKnown RBP19.2■□□□□ 0.66
RET-201ENST00000340058 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
RET-201ENST00000340058 AFAP1Q8N556 730 aa19.19■□□□□ 0.66
RET-201ENST00000340058 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
RET-201ENST00000340058 NUDCQ9Y266 331 aa19.18■□□□□ 0.66
RET-201ENST00000340058 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
RET-201ENST00000340058 PANK3Q9H999 370 aa19.18■□□□□ 0.66
RET-201ENST00000340058 RBM19Q9Y4C8 960 aaKnown RBP19.18■□□□□ 0.66
RET-201ENST00000340058 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
RET-201ENST00000340058 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
RET-201ENST00000340058 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
RET-201ENST00000340058 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
RET-201ENST00000340058 RSPH4AQ5TD94 716 aa19.14■□□□□ 0.65
RET-201ENST00000340058 USP47Q96K76 1375 aa19.14■□□□□ 0.65
RET-201ENST00000340058 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
RET-201ENST00000340058 CCDC144AA2RUR9 1427 aa19.13■□□□□ 0.65
RET-201ENST00000340058 TSHZ2Q9NRE2 1034 aa19.12■□□□□ 0.65
RET-201ENST00000340058 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
RET-201ENST00000340058 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
RET-201ENST00000340058 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
RET-201ENST00000340058 MYH16Q9H6N6 1097 aa19.1■□□□□ 0.65
RET-201ENST00000340058 KIF15Q9NS87 1388 aa19.1■□□□□ 0.65
RET-201ENST00000340058 RRBP1Q9P2E9 1410 aaKnown RBP19.1■□□□□ 0.65
RET-201ENST00000340058 RALBP1Q15311 655 aa19.1■□□□□ 0.65
RET-201ENST00000340058 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
RET-201ENST00000340058 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
RET-201ENST00000340058 PRG4Q92954 1404 aaPredicted RBP19.09■□□□□ 0.65
RET-201ENST00000340058 PLIN1O60240 522 aa19.09■□□□□ 0.65
RET-201ENST00000340058 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.65
RET-201ENST00000340058 UACAQ9BZF9 1416 aa19.08■□□□□ 0.64
RET-201ENST00000340058 CLUAP1Q96AJ1 413 aa19.08■□□□□ 0.64
RET-201ENST00000340058 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
RET-201ENST00000340058 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
RET-201ENST00000340058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.06■□□□□ 0.64
RET-201ENST00000340058 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
RET-201ENST00000340058 NBPF1Q3BBV0 1214 aa19.04■□□□□ 0.64
RET-201ENST00000340058 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
RET-201ENST00000340058 ANKRD50Q9ULJ7 1429 aa19.04■□□□□ 0.64
RET-201ENST00000340058 ANP32EQ9BTT0 268 aa19.03■□□□□ 0.64
RET-201ENST00000340058 HAP1P54257 671 aaPredicted RBP19.02■□□□□ 0.64
RET-201ENST00000340058 BCL2L13Q9BXK5 485 aa19.02■□□□□ 0.63
RET-201ENST00000340058 PAK3O75914 559 aaPredicted RBP19.01■□□□□ 0.63
RET-201ENST00000340058 CCDC184Q52MB2 194 aa19.01■□□□□ 0.63
RET-201ENST00000340058 TMEM132EQ6IEE7 984 aa19■□□□□ 0.63
RET-201ENST00000340058 APBB1O00213 710 aa19■□□□□ 0.63
RET-201ENST00000340058 MINK1Q8N4C8 1332 aaPredicted RBP18.98■□□□□ 0.63
RET-201ENST00000340058 TPRNQ4KMQ1 711 aa18.98■□□□□ 0.63
RET-201ENST00000340058 HDGFL2Q7Z4V5 671 aaPredicted RBP18.98■□□□□ 0.63
RET-201ENST00000340058 CCDC7Q96M83 1385 aa18.98■□□□□ 0.63
RET-201ENST00000340058 FYCO1Q9BQS8 1478 aa18.97■□□□□ 0.63
RET-201ENST00000340058 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.62
RET-201ENST00000340058 MYBBP1AQ9BQG0 1328 aaKnown RBP18.96■□□□□ 0.62
RET-201ENST00000340058 GOLGA2Q08379 1002 aa18.95■□□□□ 0.62
RET-201ENST00000340058 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
RET-201ENST00000340058 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
RET-201ENST00000340058 ELL2O00472 640 aaPredicted RBP18.94■□□□□ 0.62
RET-201ENST00000340058 APAF1O14727 1248 aa18.94■□□□□ 0.62
RET-201ENST00000340058 NOP58Q9Y2X3 529 aaKnown RBP18.94■□□□□ 0.62
RET-201ENST00000340058 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
RET-201ENST00000340058 EXOC6Q8TAG9 804 aa18.93■□□□□ 0.62
RET-201ENST00000340058 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
RET-201ENST00000340058 EIF5BO60841 1220 aaKnown RBP18.92■□□□□ 0.62
RET-201ENST00000340058 FAM69CQ0P6D2 419 aa18.92■□□□□ 0.62
RET-201ENST00000340058 TIAM1Q13009 1591 aa18.91■□□□□ 0.62
RET-201ENST00000340058 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
RET-201ENST00000340058 HDGFP51858 240 aaKnown RBP18.89■□□□□ 0.62
RET-201ENST00000340058 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
RET-201ENST00000340058 BECN1Q14457 450 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms