RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 L1TD1Q5T7N2 865 aaKnown RBP9.45□□□□□ -0.9
NDUFA4-201ENST00000339600 URB2Q14146 1524 aaKnown RBP9.45□□□□□ -0.9
NDUFA4-201ENST00000339600 CYB5RLQ6IPT4 315 aa9.44□□□□□ -0.9
NDUFA4-201ENST00000339600 ZNF830Q96NB3 372 aaPredicted RBP9.44□□□□□ -0.9
NDUFA4-201ENST00000339600 MAP7D2Q96T17 732 aa9.44□□□□□ -0.9
NDUFA4-201ENST00000339600 TNIKQ9UKE5 1360 aa9.44□□□□□ -0.9
NDUFA4-201ENST00000339600 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
NDUFA4-201ENST00000339600 RSF1Q96T23 1441 aaPredicted RBP9.43□□□□□ -0.9
NDUFA4-201ENST00000339600 CFTRP13569 1480 aa9.43□□□□□ -0.9
NDUFA4-201ENST00000339600 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
NDUFA4-201ENST00000339600 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
NDUFA4-201ENST00000339600 SECISBP2LQ93073 1101 aaKnown RBP9.42□□□□□ -0.9
NDUFA4-201ENST00000339600 TCERG1O14776 1098 aaKnown RBP9.41□□□□□ -0.9
NDUFA4-201ENST00000339600 BCCIPQ9P287 314 aaKnown RBP eCLIP9.41□□□□□ -0.9
NDUFA4-201ENST00000339600 IFT140Q96RY7 1462 aa9.41□□□□□ -0.9
NDUFA4-201ENST00000339600 BACH2Q9BYV9 841 aa9.41□□□□□ -0.9
NDUFA4-201ENST00000339600 PDE4AP27815 886 aa9.4□□□□□ -0.91
NDUFA4-201ENST00000339600 DMTNQ08495 405 aa9.4□□□□□ -0.91
NDUFA4-201ENST00000339600 RNF123Q5XPI4 1314 aa9.39□□□□□ -0.91
NDUFA4-201ENST00000339600 MS4A1P11836 297 aa9.39□□□□□ -0.91
NDUFA4-201ENST00000339600 ZHX1Q9UKY1 873 aaPredicted RBP9.39□□□□□ -0.91
NDUFA4-201ENST00000339600 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
NDUFA4-201ENST00000339600 FRAT2O75474 233 aaPredicted RBP9.38□□□□□ -0.91
NDUFA4-201ENST00000339600 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
NDUFA4-201ENST00000339600 ZNF608Q9ULD9 1512 aaPredicted RBP9.37□□□□□ -0.91
NDUFA4-201ENST00000339600 WDR97A6NE52 1622 aa9.36□□□□□ -0.91
NDUFA4-201ENST00000339600 TERF1P54274 439 aa9.35□□□□□ -0.91
NDUFA4-201ENST00000339600 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
NDUFA4-201ENST00000339600 CNKSR2Q8WXI2 1034 aa9.35□□□□□ -0.91
NDUFA4-201ENST00000339600 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
NDUFA4-201ENST00000339600 SIN3AQ96ST3 1273 aa9.35□□□□□ -0.91
NDUFA4-201ENST00000339600 ZBED9Q6R2W3 1325 aa9.35□□□□□ -0.91
NDUFA4-201ENST00000339600 KIF20AO95235 890 aa9.34□□□□□ -0.91
NDUFA4-201ENST00000339600 FSD2A1L4K1 749 aa9.33□□□□□ -0.92
NDUFA4-201ENST00000339600 XRCC6P12956 609 aaKnown RBP eCLIP9.33□□□□□ -0.92
NDUFA4-201ENST00000339600 RIPK4P57078 832 aa9.33□□□□□ -0.92
NDUFA4-201ENST00000339600 RGS22Q8NE09 1264 aa9.33□□□□□ -0.92
NDUFA4-201ENST00000339600 ESPNB1AK53 854 aa9.32□□□□□ -0.92
NDUFA4-201ENST00000339600 MTERF4Q7Z6M4 381 aaKnown RBP9.32□□□□□ -0.92
NDUFA4-201ENST00000339600 POGKQ9P215 609 aa9.32□□□□□ -0.92
NDUFA4-201ENST00000339600 SMG6Q86US8 1419 aaKnown RBP9.32□□□□□ -0.92
NDUFA4-201ENST00000339600 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
NDUFA4-201ENST00000339600 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
NDUFA4-201ENST00000339600 CHD1O14646 1710 aa9.31□□□□□ -0.92
NDUFA4-201ENST00000339600 VGLL3A8MV65 326 aa9.31□□□□□ -0.92
NDUFA4-201ENST00000339600 ZSCAN20P17040 1043 aaPredicted RBP9.31□□□□□ -0.92
NDUFA4-201ENST00000339600 MAPKBP1O60336 1514 aa9.31□□□□□ -0.92
NDUFA4-201ENST00000339600 PLPPR3Q6T4P5 718 aa9.3□□□□□ -0.92
NDUFA4-201ENST00000339600 KIAA1211Q6ZU35 1233 aa9.3□□□□□ -0.92
NDUFA4-201ENST00000339600 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
NDUFA4-201ENST00000339600 TAF3Q5VWG9 929 aa9.29□□□□□ -0.92
NDUFA4-201ENST00000339600 GTPBP4Q9BZE4 634 aaKnown RBP9.29□□□□□ -0.92
NDUFA4-201ENST00000339600 ANP32BQ92688 251 aaKnown RBP9.29□□□□□ -0.92
NDUFA4-201ENST00000339600 WIZO95785 1651 aa9.29□□□□□ -0.92
NDUFA4-201ENST00000339600 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
NDUFA4-201ENST00000339600 TNNT2P45379 298 aaPredicted RBP9.28□□□□□ -0.92
NDUFA4-201ENST00000339600 MMP14P50281 582 aa9.28□□□□□ -0.92
NDUFA4-201ENST00000339600 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
NDUFA4-201ENST00000339600 ABCC8Q09428 1581 aa9.28□□□□□ -0.92
NDUFA4-201ENST00000339600 LETM1O95202 739 aaPredicted RBP9.28□□□□□ -0.92
NDUFA4-201ENST00000339600 CLASP1Q7Z460 1538 aa9.28□□□□□ -0.92
NDUFA4-201ENST00000339600 AKNAQ7Z591 1439 aa9.27□□□□□ -0.93
NDUFA4-201ENST00000339600 IRX3P78415 501 aaPredicted RBP9.27□□□□□ -0.93
NDUFA4-201ENST00000339600 TOPBP1Q92547 1522 aa9.27□□□□□ -0.93
NDUFA4-201ENST00000339600 GOLGA6L3A6NEY3 463 aa9.26□□□□□ -0.93
NDUFA4-201ENST00000339600 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
NDUFA4-201ENST00000339600 PANK2Q9BZ23 570 aa9.26□□□□□ -0.93
NDUFA4-201ENST00000339600 PRDM10Q9NQV6 1147 aa9.26□□□□□ -0.93
NDUFA4-201ENST00000339600 OFD1O75665 1012 aa9.25□□□□□ -0.93
NDUFA4-201ENST00000339600 SLC20A2Q08357 652 aa9.25□□□□□ -0.93
NDUFA4-201ENST00000339600 ILDR1Q86SU0 546 aaPredicted RBP9.25□□□□□ -0.93
NDUFA4-201ENST00000339600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
NDUFA4-201ENST00000339600 KCNG1Q9UIX4 513 aa9.25□□□□□ -0.93
NDUFA4-201ENST00000339600 TARBP1Q13395 1621 aaKnown RBP9.24□□□□□ -0.93
NDUFA4-201ENST00000339600 CNPY4Q8N129 248 aa9.23□□□□□ -0.93
NDUFA4-201ENST00000339600 CCDC94Q9BW85 323 aaPredicted RBP9.23□□□□□ -0.93
NDUFA4-201ENST00000339600 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
NDUFA4-201ENST00000339600 MRE11P49959 708 aa9.22□□□□□ -0.93
NDUFA4-201ENST00000339600 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
NDUFA4-201ENST00000339600 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.22□□□□□ -0.93
NDUFA4-201ENST00000339600 TOP2AP11388 1531 aaKnown RBP9.21□□□□□ -0.94
NDUFA4-201ENST00000339600 NUDCQ9Y266 331 aa9.21□□□□□ -0.94
NDUFA4-201ENST00000339600 DNMBPQ6XZF7 1577 aa9.21□□□□□ -0.94
NDUFA4-201ENST00000339600 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.942e-6■■□□□ 12.9
NDUFA4-201ENST00000339600 CLGNO14967 610 aa9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 C14orf37Q86TY3 774 aa9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 CLIP1P30622 1438 aa9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 SYNJ1O43426 1573 aa9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 DNTTIP2Q5QJE6 756 aaKnown RBP9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 MYH16Q9H6N6 1097 aa9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 ISY1Q9ULR0 285 aaKnown RBP9.2□□□□□ -0.94
NDUFA4-201ENST00000339600 DYNC1I1O14576 645 aa9.19□□□□□ -0.94
NDUFA4-201ENST00000339600 PSEN1P49768 467 aa9.19□□□□□ -0.94
NDUFA4-201ENST00000339600 RRBP1Q9P2E9 1410 aaKnown RBP9.19□□□□□ -0.94
NDUFA4-201ENST00000339600 PHLDB1Q86UU1 1377 aa9.19□□□□□ -0.94
NDUFA4-201ENST00000339600 GOLGA3Q08378 1498 aa9.19□□□□□ -0.94
NDUFA4-201ENST00000339600 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
NDUFA4-201ENST00000339600 GAPVD1Q14C86 1478 aa9.16□□□□□ -0.94
NDUFA4-201ENST00000339600 CCDC184Q52MB2 194 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms