RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SPAG9O60271 1321 aaKnown RBP8.37□□□□□ -1.07
PRKDC-202ENST00000338368 FYCO1Q9BQS8 1478 aa8.37□□□□□ -1.07
PRKDC-202ENST00000338368 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
PRKDC-202ENST00000338368 ANP32AP39687 249 aaKnown RBP8.37□□□□□ -1.07
PRKDC-202ENST00000338368 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
PRKDC-202ENST00000338368 ZBTB47Q9UFB7 747 aaPredicted RBP8.35□□□□□ -1.07
PRKDC-202ENST00000338368 NPM2Q86SE8 214 aaKnown RBP8.35□□□□□ -1.07
PRKDC-202ENST00000338368 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
PRKDC-202ENST00000338368 IFT140Q96RY7 1462 aa8.35□□□□□ -1.07
PRKDC-202ENST00000338368 CFAP53Q96M91 514 aa8.33□□□□□ -1.08
PRKDC-202ENST00000338368 ROCK2O75116 1388 aaKnown RBP8.33□□□□□ -1.08
PRKDC-202ENST00000338368 PRKRIP1Q9H875 184 aaPredicted RBP8.33□□□□□ -1.08
PRKDC-202ENST00000338368 EFCAB5A4FU69 1503 aa8.33□□□□□ -1.08
PRKDC-202ENST00000338368 PPP4R2Q9NY27 417 aa8.33□□□□□ -1.08
PRKDC-202ENST00000338368 ST20-MTHFSA0A0A6YYL1 179 aa8.32□□□□□ -1.08
PRKDC-202ENST00000338368 BCL11AQ9H165 835 aa8.32□□□□□ -1.08
PRKDC-202ENST00000338368 POGKQ9P215 609 aa8.32□□□□□ -1.08
PRKDC-202ENST00000338368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.32□□□□□ -1.083e-8■■■□□ 17.8
PRKDC-202ENST00000338368 ARID4BQ4LE39 1312 aaPredicted RBP8.31□□□□□ -1.08
PRKDC-202ENST00000338368 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
PRKDC-202ENST00000338368 PRG4Q92954 1404 aaPredicted RBP8.31□□□□□ -1.08
PRKDC-202ENST00000338368 MLECQ14165 292 aa8.31□□□□□ -1.08
PRKDC-202ENST00000338368 TIAM1Q13009 1591 aa8.3□□□□□ -1.08
PRKDC-202ENST00000338368 MIA2Q96PC5 1412 aa8.3□□□□□ -1.08
PRKDC-202ENST00000338368 KIAA0586Q9BVV6 1533 aa8.3□□□□□ -1.08
PRKDC-202ENST00000338368 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
PRKDC-202ENST00000338368 OSCARQ8IYS5 282 aa8.3□□□□□ -1.08
PRKDC-202ENST00000338368 URB2Q14146 1524 aaKnown RBP8.3□□□□□ -1.08
PRKDC-202ENST00000338368 KTN1Q86UP2 1357 aaKnown RBP8.29□□□□□ -1.08
PRKDC-202ENST00000338368 TNNT2P45379 298 aaPredicted RBP8.29□□□□□ -1.08
PRKDC-202ENST00000338368 RALBP1Q15311 655 aa8.29□□□□□ -1.08
PRKDC-202ENST00000338368 HFM1A2PYH4 1435 aa8.29□□□□□ -1.08
PRKDC-202ENST00000338368 ANKRD50Q9ULJ7 1429 aa8.29□□□□□ -1.08
PRKDC-202ENST00000338368 SNAPC4Q5SXM2 1469 aa8.29□□□□□ -1.08
PRKDC-202ENST00000338368 KIF15Q9NS87 1388 aa8.28□□□□□ -1.08
PRKDC-202ENST00000338368 LAMC3Q9Y6N6 1575 aa8.28□□□□□ -1.08
PRKDC-202ENST00000338368 TROQ12816 1431 aaPredicted RBP8.28□□□□□ -1.08
PRKDC-202ENST00000338368 SAFB2Q14151 953 aaKnown RBP eCLIP8.28□□□□□ -1.08
PRKDC-202ENST00000338368 NUDCQ9Y266 331 aa8.27□□□□□ -1.09
PRKDC-202ENST00000338368 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
PRKDC-202ENST00000338368 WASHC2CQ9Y4E1 1318 aa8.27□□□□□ -1.09
PRKDC-202ENST00000338368 AFAP1Q8N556 730 aa8.27□□□□□ -1.09
PRKDC-202ENST00000338368 SRPK2P78362 688 aaKnown RBP8.26□□□□□ -1.09
PRKDC-202ENST00000338368 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
PRKDC-202ENST00000338368 MORC1Q86VD1 984 aa8.26□□□□□ -1.09
PRKDC-202ENST00000338368 USP47Q96K76 1375 aa8.26□□□□□ -1.09
PRKDC-202ENST00000338368 CYB5RLQ6IPT4 315 aa8.26□□□□□ -1.09
PRKDC-202ENST00000338368 NLRP13Q86W25 1043 aa8.25□□□□□ -1.09
PRKDC-202ENST00000338368 STK26Q9P289 416 aa8.25□□□□□ -1.09
PRKDC-202ENST00000338368 WASHC2AQ641Q2 1341 aa8.25□□□□□ -1.09
PRKDC-202ENST00000338368 SYNJ2O15056 1496 aa8.25□□□□□ -1.09
PRKDC-202ENST00000338368 MAP3K1Q13233 1512 aa8.25□□□□□ -1.09
PRKDC-202ENST00000338368 NAIPQ13075 1403 aa8.25□□□□□ -1.09
PRKDC-202ENST00000338368 ERICH6BQ5W0A0 696 aa8.24□□□□□ -1.09
PRKDC-202ENST00000338368 NBPF8Q3BBV2 869 aa8.24□□□□□ -1.09
PRKDC-202ENST00000338368 U2SURPO15042 1029 aaKnown RBP8.24□□□□□ -1.09
PRKDC-202ENST00000338368 CCDC7Q96M83 1385 aa8.24□□□□□ -1.09
PRKDC-202ENST00000338368 MAPK8IP3Q9UPT6 1336 aa8.24□□□□□ -1.09
PRKDC-202ENST00000338368 HDGFP51858 240 aaKnown RBP8.24□□□□□ -1.09
PRKDC-202ENST00000338368 UPF2Q9HAU5 1272 aaKnown RBP8.24□□□□□ -1.09
PRKDC-202ENST00000338368 EHBP1L1Q8N3D4 1523 aa8.23□□□□□ -1.09
PRKDC-202ENST00000338368 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
PRKDC-202ENST00000338368 KIF7Q2M1P5 1343 aa8.23□□□□□ -1.09
PRKDC-202ENST00000338368 ZNF608Q9ULD9 1512 aaPredicted RBP8.23□□□□□ -1.09
PRKDC-202ENST00000338368 MYBBP1AQ9BQG0 1328 aaKnown RBP8.23□□□□□ -1.09
PRKDC-202ENST00000338368 EPRSP07814 1512 aaKnown RBP8.23□□□□□ -1.09
PRKDC-202ENST00000338368 TRAK1Q9UPV9 953 aa8.22□□□□□ -1.09
PRKDC-202ENST00000338368 PANK3Q9H999 370 aa8.22□□□□□ -1.09
PRKDC-202ENST00000338368 DAPK1P53355 1430 aa8.22□□□□□ -1.09
PRKDC-202ENST00000338368 CDK13Q14004 1512 aaKnown RBP8.22□□□□□ -1.09
PRKDC-202ENST00000338368 STAC3Q96MF2 364 aa8.21□□□□□ -1.09
PRKDC-202ENST00000338368 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.09
PRKDC-202ENST00000338368 FRAT1Q92837 279 aaPredicted RBP8.21□□□□□ -1.09
PRKDC-202ENST00000338368 PLB1Q6P1J6 1458 aa8.21□□□□□ -1.1
PRKDC-202ENST00000338368 EIF3AQ14152 1382 aaKnown RBP8.2□□□□□ -1.1
PRKDC-202ENST00000338368 RCAN3Q9UKA8 241 aa8.2□□□□□ -1.1
PRKDC-202ENST00000338368 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
PRKDC-202ENST00000338368 ROCK1Q13464 1354 aa8.2□□□□□ -1.1
PRKDC-202ENST00000338368 VGFO15240 615 aaPredicted RBP8.19□□□□□ -1.1
PRKDC-202ENST00000338368 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
PRKDC-202ENST00000338368 KIAA1107Q9UPP5 1409 aa8.19□□□□□ -1.1
PRKDC-202ENST00000338368 PCF11O94913 1555 aaKnown RBP8.19□□□□□ -1.1
PRKDC-202ENST00000338368 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
PRKDC-202ENST00000338368 RBM19Q9Y4C8 960 aaKnown RBP8.19□□□□□ -1.1
PRKDC-202ENST00000338368 LAS1LQ9Y4W2 734 aaKnown RBP8.19□□□□□ -1.1
PRKDC-202ENST00000338368 ABCC5O15440 1437 aa8.19□□□□□ -1.1
PRKDC-202ENST00000338368 TRHP20396 242 aaPredicted RBP8.18□□□□□ -1.1
PRKDC-202ENST00000338368 GRIN2AQ12879 1464 aa8.18□□□□□ -1.1
PRKDC-202ENST00000338368 TSHZ2Q9NRE2 1034 aa8.18□□□□□ -1.1
PRKDC-202ENST00000338368 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
PRKDC-202ENST00000338368 ZBTB7CA1YPR0 619 aa8.18□□□□□ -1.1
PRKDC-202ENST00000338368 CNTLNQ9NXG0 1405 aa8.17□□□□□ -1.1
PRKDC-202ENST00000338368 NBPF1Q3BBV0 1214 aa8.17□□□□□ -1.1
PRKDC-202ENST00000338368 PNNQ9H307 717 aaKnown RBP8.17□□□□□ -1.1
PRKDC-202ENST00000338368 IQGAP2Q13576 1575 aa8.17□□□□□ -1.1
PRKDC-202ENST00000338368 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
PRKDC-202ENST00000338368 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.11e-7■■■■□ 20.2
PRKDC-202ENST00000338368 PLEKHG5O94827 1062 aa8.17□□□□□ -1.1
PRKDC-202ENST00000338368 RGS3P49796 1198 aa8.16□□□□□ -1.1
PRKDC-202ENST00000338368 FTSJ3Q8IY81 847 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms