RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF1-201ENST00000337665 CROCC2H7BZ55 1655 aa20.53■□□□□ 0.88
ARHGEF1-201ENST00000337665 ADGBQ8N7X0 1667 aa20.53■□□□□ 0.88
ARHGEF1-201ENST00000337665 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF1-201ENST00000337665 ABCA8O94911 1581 aa20.52■□□□□ 0.88
ARHGEF1-201ENST00000337665 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
ARHGEF1-201ENST00000337665 KCNH8Q96L42 1107 aa20.51■□□□□ 0.87
ARHGEF1-201ENST00000337665 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
ARHGEF1-201ENST00000337665 MPHOSPH9Q99550 1183 aa20.5■□□□□ 0.87
ARHGEF1-201ENST00000337665 ZNF644Q9H582 1327 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF1-201ENST00000337665 GPATCH8Q9UKJ3 1502 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-201ENST00000337665 HIRIP3Q9BW71 556 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF1-201ENST00000337665 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
ARHGEF1-201ENST00000337665 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
ARHGEF1-201ENST00000337665 CDC42BPAQ5VT25 1732 aa20.46■□□□□ 0.87
ARHGEF1-201ENST00000337665 ADGRL2O95490 1459 aa20.45■□□□□ 0.86
ARHGEF1-201ENST00000337665 ANKRD30BQ9BXX2 1392 aa20.44■□□□□ 0.86
ARHGEF1-201ENST00000337665 RPRD2Q5VT52 1461 aaKnown RBP20.42■□□□□ 0.86
ARHGEF1-201ENST00000337665 CCER2I3L3R5 266 aa20.42■□□□□ 0.86
ARHGEF1-201ENST00000337665 FBLN2P98095 1184 aa20.42■□□□□ 0.86
ARHGEF1-201ENST00000337665 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
ARHGEF1-201ENST00000337665 NCOA1Q15788 1441 aa20.41■□□□□ 0.86
ARHGEF1-201ENST00000337665 ATP10BO94823 1461 aa20.4■□□□□ 0.86
ARHGEF1-201ENST00000337665 PZPP20742 1482 aa20.39■□□□□ 0.86
ARHGEF1-201ENST00000337665 TEX14Q8IWB6 1497 aa20.39■□□□□ 0.86
ARHGEF1-201ENST00000337665 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
ARHGEF1-201ENST00000337665 FOXD1Q16676 465 aa20.36■□□□□ 0.85
ARHGEF1-201ENST00000337665 L3MBTL2Q969R5 705 aa20.35■□□□□ 0.85
ARHGEF1-201ENST00000337665 ANP32CO43423 234 aa20.34■□□□□ 0.85
ARHGEF1-201ENST00000337665 CHD1O14646 1710 aa20.34■□□□□ 0.85
ARHGEF1-201ENST00000337665 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.85
ARHGEF1-201ENST00000337665 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-201ENST00000337665 SUPT16HQ9Y5B9 1047 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-201ENST00000337665 POLR1AO95602 1720 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF1-201ENST00000337665 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
ARHGEF1-201ENST00000337665 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
ARHGEF1-201ENST00000337665 PLEKHD1A6NEE1 506 aa20.28■□□□□ 0.84
ARHGEF1-201ENST00000337665 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
ARHGEF1-201ENST00000337665 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
ARHGEF1-201ENST00000337665 ANKRD30AQ9BXX3 1397 aa20.28■□□□□ 0.84
ARHGEF1-201ENST00000337665 MBD5Q9P267 1494 aa20.27■□□□□ 0.84
ARHGEF1-201ENST00000337665 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.844e-7■■■■□ 20.1
ARHGEF1-201ENST00000337665 CDC42BPBQ9Y5S2 1711 aa20.26■□□□□ 0.83
ARHGEF1-201ENST00000337665 KIAA1107Q9UPP5 1409 aa20.26■□□□□ 0.83
ARHGEF1-201ENST00000337665 NBPF8Q3BBV2 869 aa20.26■□□□□ 0.83
ARHGEF1-201ENST00000337665 SPATA31E1Q6ZUB1 1445 aa20.25■□□□□ 0.83
ARHGEF1-201ENST00000337665 KDM5DQ9BY66 1539 aa20.25■□□□□ 0.83
ARHGEF1-201ENST00000337665 PREX2Q70Z35 1606 aa20.25■□□□□ 0.83
ARHGEF1-201ENST00000337665 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF1-201ENST00000337665 PTPRGP23470 1445 aa20.24■□□□□ 0.83
ARHGEF1-201ENST00000337665 C9orf84Q5VXU9 1444 aa20.23■□□□□ 0.83
ARHGEF1-201ENST00000337665 ANKRD50Q9ULJ7 1429 aa20.23■□□□□ 0.83
ARHGEF1-201ENST00000337665 SAMD9LQ8IVG5 1584 aa20.21■□□□□ 0.83
ARHGEF1-201ENST00000337665 CNTLNQ9NXG0 1405 aa20.21■□□□□ 0.83
ARHGEF1-201ENST00000337665 C11orf95C9JLR9 678 aaPredicted RBP20.18■□□□□ 0.82
ARHGEF1-201ENST00000337665 CCDC7Q96M83 1385 aa20.18■□□□□ 0.82
ARHGEF1-201ENST00000337665 PKD2Q13563 968 aa20.14■□□□□ 0.81
ARHGEF1-201ENST00000337665 TTC37Q6PGP7 1564 aa20.13■□□□□ 0.81
ARHGEF1-201ENST00000337665 MAST1Q9Y2H9 1570 aa20.13■□□□□ 0.81
ARHGEF1-201ENST00000337665 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
ARHGEF1-201ENST00000337665 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
ARHGEF1-201ENST00000337665 UHRF1BP1Q6BDS2 1440 aa20.11■□□□□ 0.81
ARHGEF1-201ENST00000337665 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.11■□□□□ 0.81
ARHGEF1-201ENST00000337665 KDM5CP41229 1560 aa20.11■□□□□ 0.81
ARHGEF1-201ENST00000337665 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
ARHGEF1-201ENST00000337665 ARHGEF12Q9NZN5 1544 aa20.1■□□□□ 0.81
ARHGEF1-201ENST00000337665 BCORL1Q5H9F3 1711 aa20.1■□□□□ 0.81
ARHGEF1-201ENST00000337665 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
ARHGEF1-201ENST00000337665 NUP155O75694 1391 aa20.09■□□□□ 0.81
ARHGEF1-201ENST00000337665 HNRNPMP52272 730 aaKnown RBP eCLIP20.09■□□□□ 0.81
ARHGEF1-201ENST00000337665 MYO5CQ9NQX4 1742 aa20.09■□□□□ 0.81
ARHGEF1-201ENST00000337665 TSPY4P0CV99 314 aa20.08■□□□□ 0.81
ARHGEF1-201ENST00000337665 TSPY10P0CW01 314 aa20.08■□□□□ 0.81
ARHGEF1-201ENST00000337665 KIF7Q2M1P5 1343 aa20.07■□□□□ 0.8
ARHGEF1-201ENST00000337665 UNC13BO14795 1591 aa20.06■□□□□ 0.8
ARHGEF1-201ENST00000337665 SYCP2Q9BX26 1530 aa20.06■□□□□ 0.8
ARHGEF1-201ENST00000337665 RSPH4AQ5TD94 716 aa20.05■□□□□ 0.8
ARHGEF1-201ENST00000337665 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
ARHGEF1-201ENST00000337665 RALGAPBQ86X10 1494 aa20.05■□□□□ 0.8
ARHGEF1-201ENST00000337665 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
ARHGEF1-201ENST00000337665 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
ARHGEF1-201ENST00000337665 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
ARHGEF1-201ENST00000337665 ARHGAP5Q13017 1502 aa20.02■□□□□ 0.8
ARHGEF1-201ENST00000337665 ZCCHC11Q5TAX3 1644 aaKnown RBP20.01■□□□□ 0.79
ARHGEF1-201ENST00000337665 USP47Q96K76 1375 aa20■□□□□ 0.79
ARHGEF1-201ENST00000337665 FKBP8Q14318 412 aa19.99■□□□□ 0.79
ARHGEF1-201ENST00000337665 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
ARHGEF1-201ENST00000337665 CCDC184Q52MB2 194 aa19.98■□□□□ 0.79
ARHGEF1-201ENST00000337665 PLEKHH2Q8IVE3 1493 aa19.98■□□□□ 0.79
ARHGEF1-201ENST00000337665 IQGAP3Q86VI3 1631 aa19.98■□□□□ 0.79
ARHGEF1-201ENST00000337665 ARID4BQ4LE39 1312 aaPredicted RBP19.97■□□□□ 0.79
ARHGEF1-201ENST00000337665 DHX29Q7Z478 1369 aaKnown RBP19.96■□□□□ 0.79
ARHGEF1-201ENST00000337665 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
ARHGEF1-201ENST00000337665 MAGI2Q86UL8 1455 aa19.93■□□□□ 0.78
ARHGEF1-201ENST00000337665 TRPM1Q7Z4N2 1603 aa19.93■□□□□ 0.78
ARHGEF1-201ENST00000337665 PLCH2O75038 1416 aa19.92■□□□□ 0.78
ARHGEF1-201ENST00000337665 DUOX2Q9NRD8 1548 aa19.91■□□□□ 0.78
ARHGEF1-201ENST00000337665 PLA2R1Q13018 1463 aa19.91■□□□□ 0.78
ARHGEF1-201ENST00000337665 E9PCH4 1651 aa19.9■□□□□ 0.78
ARHGEF1-201ENST00000337665 ABCC1P33527 1531 aa19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms