RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 HECW1Q76N89 1606 aa27.41■■□□□ 1.98
TSPO-202ENST00000337554 SETD1BQ9UPS6 1966 aaKnown RBP27.39■■□□□ 1.97
TSPO-202ENST00000337554 NCOA1Q15788 1441 aa27.35■■□□□ 1.97
TSPO-202ENST00000337554 ATP10AO60312 1499 aa27.33■■□□□ 1.97
TSPO-202ENST00000337554 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
TSPO-202ENST00000337554 CFAP74Q9C0B2 1584 aa27.32■■□□□ 1.96
TSPO-202ENST00000337554 C9orf84Q5VXU9 1444 aa27.31■■□□□ 1.96
TSPO-202ENST00000337554 HSPA1LP34931 641 aa27.3■■□□□ 1.96
TSPO-202ENST00000337554 ZNF335Q9H4Z2 1342 aaPredicted RBP27.3■■□□□ 1.96
TSPO-202ENST00000337554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.27■■□□□ 1.96
TSPO-202ENST00000337554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.27■■□□□ 1.96
TSPO-202ENST00000337554 HNRNPUL2Q1KMD3 747 aaKnown RBP27.27■■□□□ 1.96
TSPO-202ENST00000337554 RAPGEF6Q8TEU7 1601 aa27.27■■□□□ 1.96
TSPO-202ENST00000337554 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
TSPO-202ENST00000337554 C3P01024 1663 aa27.22■■□□□ 1.95
TSPO-202ENST00000337554 SCAPERQ9BY12 1400 aa27.22■■□□□ 1.95
TSPO-202ENST00000337554 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.94
TSPO-202ENST00000337554 TRAPPC8Q9Y2L5 1435 aa27.19■■□□□ 1.94
TSPO-202ENST00000337554 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
TSPO-202ENST00000337554 PLEKHD1A6NEE1 506 aa27.14■■□□□ 1.94
TSPO-202ENST00000337554 NCKAP5LQ9HCH0 1330 aa27.14■■□□□ 1.93
TSPO-202ENST00000337554 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
TSPO-202ENST00000337554 SAMD9Q5K651 1589 aa27.1■■□□□ 1.93
TSPO-202ENST00000337554 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
TSPO-202ENST00000337554 PIP4K2BP78356 416 aa27.08■■□□□ 1.93
TSPO-202ENST00000337554 PLCH2O75038 1416 aa27.07■■□□□ 1.92
TSPO-202ENST00000337554 SCAF1Q9H7N4 1312 aaKnown RBP27.05■■□□□ 1.92
TSPO-202ENST00000337554 RGS17Q9UGC6 210 aaPredicted RBP27.01■■□□□ 1.91
TSPO-202ENST00000337554 REREQ9P2R6 1566 aa27.01■■□□□ 1.91
TSPO-202ENST00000337554 DIP2CQ9Y2E4 1556 aa27.01■■□□□ 1.91
TSPO-202ENST00000337554 KDM5CP41229 1560 aa26.98■■□□□ 1.91
TSPO-202ENST00000337554 AFAP1Q8N556 730 aa26.97■■□□□ 1.91
TSPO-202ENST00000337554 TCOF1Q13428 1488 aaKnown RBP26.97■■□□□ 1.91
TSPO-202ENST00000337554 AGLP35573 1532 aa26.96■■□□□ 1.91
TSPO-202ENST00000337554 TOM1O60784 492 aa26.96■■□□□ 1.91
TSPO-202ENST00000337554 PKD2Q13563 968 aa26.96■■□□□ 1.91
TSPO-202ENST00000337554 PLA2R1Q13018 1463 aa26.95■■□□□ 1.91
TSPO-202ENST00000337554 ZNF518AQ6AHZ1 1483 aa26.94■■□□□ 1.9
TSPO-202ENST00000337554 NPATQ14207 1427 aa26.94■■□□□ 1.9
TSPO-202ENST00000337554 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
TSPO-202ENST00000337554 EFCAB2Q5VUJ9 269 aa26.9■■□□□ 1.9
TSPO-202ENST00000337554 ESF1Q9H501 851 aaKnown RBP26.9■■□□□ 1.9
TSPO-202ENST00000337554 ABCA6Q8N139 1617 aa26.9■■□□□ 1.9
TSPO-202ENST00000337554 CNTLNQ9NXG0 1405 aa26.89■■□□□ 1.89
TSPO-202ENST00000337554 PPP6R1Q9UPN7 881 aa26.88■■□□□ 1.89
TSPO-202ENST00000337554 ZNF142P52746 1687 aaPredicted RBP26.83■■□□□ 1.89
TSPO-202ENST00000337554 MLH3Q9UHC1 1453 aa26.83■■□□□ 1.89
TSPO-202ENST00000337554 ZMYM3Q14202 1370 aa26.82■■□□□ 1.88
TSPO-202ENST00000337554 CPS1P31327 1500 aa26.81■■□□□ 1.88
TSPO-202ENST00000337554 CDK13Q14004 1512 aaKnown RBP26.81■■□□□ 1.88
TSPO-202ENST00000337554 MYO3AQ8NEV4 1616 aa26.79■■□□□ 1.88
TSPO-202ENST00000337554 MROH2AA6NES4 1674 aa26.79■■□□□ 1.88
TSPO-202ENST00000337554 MYT1LQ9UL68 1186 aa26.78■■□□□ 1.88
TSPO-202ENST00000337554 CEP170BQ9Y4F5 1589 aaPredicted RBP26.78■■□□□ 1.88
TSPO-202ENST00000337554 MYO5CQ9NQX4 1742 aa26.78■■□□□ 1.88
TSPO-202ENST00000337554 SHANK2Q9UPX8 1470 aa26.76■■□□□ 1.87
TSPO-202ENST00000337554 PTPRKQ15262 1439 aa26.74■■□□□ 1.87
TSPO-202ENST00000337554 POTEAQ6S8J7 498 aa26.73■■□□□ 1.87
TSPO-202ENST00000337554 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
TSPO-202ENST00000337554 SENP3Q9H4L4 574 aaPredicted RBP26.71■■□□□ 1.87
TSPO-202ENST00000337554 NEURL4Q96JN8 1562 aa26.68■■□□□ 1.86
TSPO-202ENST00000337554 ARHGAP5Q13017 1502 aa26.67■■□□□ 1.86
TSPO-202ENST00000337554 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
TSPO-202ENST00000337554 KIF14Q15058 1648 aa26.67■■□□□ 1.86
TSPO-202ENST00000337554 KIDINS220Q9ULH0 1771 aa26.66■■□□□ 1.86
TSPO-202ENST00000337554 VWDEQ8N2E2 1590 aa26.65■■□□□ 1.86
TSPO-202ENST00000337554 DNMT1P26358 1616 aaKnown RBP26.61■■□□□ 1.85
TSPO-202ENST00000337554 CLTCQ00610 1675 aaKnown RBP26.6■■□□□ 1.85
TSPO-202ENST00000337554 A2ML1A8K2U0 1454 aa26.58■■□□□ 1.85
TSPO-202ENST00000337554 SETD1AO15047 1707 aaKnown RBP26.56■■□□□ 1.84
TSPO-202ENST00000337554 ABCC1P33527 1531 aa26.56■■□□□ 1.84
TSPO-202ENST00000337554 POLR1AO95602 1720 aaPredicted RBP26.56■■□□□ 1.84
TSPO-202ENST00000337554 CDC42BPBQ9Y5S2 1711 aa26.54■■□□□ 1.84
TSPO-202ENST00000337554 ITSN2Q9NZM3 1697 aa26.51■■□□□ 1.83
TSPO-202ENST00000337554 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
TSPO-202ENST00000337554 SRCAPQ6ZRS2 3230 aa26.48■■□□□ 1.83
TSPO-202ENST00000337554 TROQ12816 1431 aaPredicted RBP26.48■■□□□ 1.83
TSPO-202ENST00000337554 STRCP1A6NGW2 1772 aa26.47■■□□□ 1.83
TSPO-202ENST00000337554 RNF17Q9BXT8 1623 aaKnown RBP26.45■■□□□ 1.82
TSPO-202ENST00000337554 CSRNP3Q8WYN3 585 aa26.44■■□□□ 1.82
TSPO-202ENST00000337554 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
TSPO-202ENST00000337554 UPF1Q92900 1129 aaKnown RBP eCLIP26.43■■□□□ 1.82
TSPO-202ENST00000337554 PLXNC1O60486 1568 aa26.42■■□□□ 1.82
TSPO-202ENST00000337554 MED14O60244 1454 aa26.42■■□□□ 1.82
TSPO-202ENST00000337554 CDK11AQ9UQ88 783 aaPredicted RBP26.41■■□□□ 1.82
TSPO-202ENST00000337554 PREX2Q70Z35 1606 aa26.39■■□□□ 1.82
TSPO-202ENST00000337554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.82
TSPO-202ENST00000337554 ANKLE2Q86XL3 938 aa26.39■■□□□ 1.82
TSPO-202ENST00000337554 NPHP4O75161 1426 aaPredicted RBP26.39■■□□□ 1.81
TSPO-202ENST00000337554 GGT6Q6P531 493 aa26.37■■□□□ 1.81
TSPO-202ENST00000337554 ATP1B4Q9UN42 357 aaPredicted RBP26.36■■□□□ 1.81
TSPO-202ENST00000337554 DEPDC5O75140 1603 aa26.34■■□□□ 1.81
TSPO-202ENST00000337554 SYNMO15061 1565 aa26.33■■□□□ 1.81
TSPO-202ENST00000337554 CLIP1P30622 1438 aa26.33■■□□□ 1.81
TSPO-202ENST00000337554 FBXO31Q5XUX0 539 aaPredicted RBP26.33■■□□□ 1.81
TSPO-202ENST00000337554 A2MP01023 1474 aa26.32■■□□□ 1.8
TSPO-202ENST00000337554 SPAG9O60271 1321 aaKnown RBP26.31■■□□□ 1.8
TSPO-202ENST00000337554 TNRQ92752 1358 aa26.31■■□□□ 1.8
TSPO-202ENST00000337554 FAM135BQ49AJ0 1406 aa26.28■■□□□ 1.8
TSPO-202ENST00000337554 IQGAP1P46940 1657 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms