RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 CALRP27797 417 aaKnown RBP13.21□□□□□ -0.3
CACNA1C-202ENST00000335762 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-202ENST00000335762 TPM3P06753 285 aa13.2□□□□□ -0.3
CACNA1C-202ENST00000335762 CEP89Q96ST8 783 aa13.19□□□□□ -0.3
CACNA1C-202ENST00000335762 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-202ENST00000335762 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
CACNA1C-202ENST00000335762 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
CACNA1C-202ENST00000335762 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-202ENST00000335762 PLEKHD1A6NEE1 506 aa13.16□□□□□ -0.3
CACNA1C-202ENST00000335762 RWDD1Q9H446 243 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-202ENST00000335762 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-202ENST00000335762 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
CACNA1C-202ENST00000335762 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
CACNA1C-202ENST00000335762 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
CACNA1C-202ENST00000335762 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
CACNA1C-202ENST00000335762 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-202ENST00000335762 TMF1P82094 1093 aa13.12□□□□□ -0.31
CACNA1C-202ENST00000335762 CLIP1P30622 1438 aa13.12□□□□□ -0.31
CACNA1C-202ENST00000335762 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-202ENST00000335762 PHF14O94880 888 aa13.11□□□□□ -0.31
CACNA1C-202ENST00000335762 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-202ENST00000335762 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-202ENST00000335762 GPS2Q13227 327 aa13.1□□□□□ -0.31
CACNA1C-202ENST00000335762 MORC1Q86VD1 984 aa13.1□□□□□ -0.31
CACNA1C-202ENST00000335762 IPO9Q96P70 1041 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-202ENST00000335762 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-202ENST00000335762 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
CACNA1C-202ENST00000335762 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-202ENST00000335762 SOX12O15370 315 aa13.1□□□□□ -0.31
CACNA1C-202ENST00000335762 CCER2I3L3R5 266 aa13.09□□□□□ -0.31
CACNA1C-202ENST00000335762 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-202ENST00000335762 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
CACNA1C-202ENST00000335762 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-202ENST00000335762 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
CACNA1C-202ENST00000335762 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
CACNA1C-202ENST00000335762 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-202ENST00000335762 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-202ENST00000335762 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
CACNA1C-202ENST00000335762 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
CACNA1C-202ENST00000335762 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
CACNA1C-202ENST00000335762 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
CACNA1C-202ENST00000335762 PES1O00541 588 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-202ENST00000335762 CCDC70Q6NSX1 233 aa13.05□□□□□ -0.32
CACNA1C-202ENST00000335762 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-202ENST00000335762 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-202ENST00000335762 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
CACNA1C-202ENST00000335762 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-202ENST00000335762 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
CACNA1C-202ENST00000335762 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
CACNA1C-202ENST00000335762 HMMRO75330 724 aa13.03□□□□□ -0.32
CACNA1C-202ENST00000335762 ST18O60284 1047 aa13.03□□□□□ -0.32
CACNA1C-202ENST00000335762 TPD52L1Q16890 204 aaPredicted RBP13.02□□□□□ -0.32
CACNA1C-202ENST00000335762 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.32
CACNA1C-202ENST00000335762 ZNF330Q9Y3S2 320 aaPredicted RBP13.02□□□□□ -0.32
CACNA1C-202ENST00000335762 KIF16BQ96L93 1317 aa13.02□□□□□ -0.32
CACNA1C-202ENST00000335762 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.33
CACNA1C-202ENST00000335762 MARCH6O60337 910 aa13.02□□□□□ -0.33
CACNA1C-202ENST00000335762 BECN2A8MW95 431 aa13.02□□□□□ -0.33
CACNA1C-202ENST00000335762 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
CACNA1C-202ENST00000335762 TPM1P09493 284 aa13.01□□□□□ -0.33
CACNA1C-202ENST00000335762 DDX49Q9Y6V7 483 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-202ENST00000335762 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
CACNA1C-202ENST00000335762 U2AF1L5P0DN76 240 aaPredicted RBP13□□□□□ -0.33
CACNA1C-202ENST00000335762 U2AF1Q01081 240 aaKnown RBP eCLIP13□□□□□ -0.33
CACNA1C-202ENST00000335762 TEX35Q5T0J7 233 aa13□□□□□ -0.33
CACNA1C-202ENST00000335762 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
CACNA1C-202ENST00000335762 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
CACNA1C-202ENST00000335762 FOXD4L5Q5VV16 416 aaPredicted RBP13□□□□□ -0.33
CACNA1C-202ENST00000335762 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
CACNA1C-202ENST00000335762 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
CACNA1C-202ENST00000335762 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-202ENST00000335762 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
CACNA1C-202ENST00000335762 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-202ENST00000335762 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
CACNA1C-202ENST00000335762 ZNF592Q92610 1267 aa12.98□□□□□ -0.33
CACNA1C-202ENST00000335762 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
CACNA1C-202ENST00000335762 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-202ENST00000335762 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
CACNA1C-202ENST00000335762 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-202ENST00000335762 IPO7O95373 1038 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-202ENST00000335762 SKOR2Q2VWA4 1001 aaPredicted RBP12.97□□□□□ -0.33
CACNA1C-202ENST00000335762 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
CACNA1C-202ENST00000335762 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
CACNA1C-202ENST00000335762 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
CACNA1C-202ENST00000335762 TPM2P07951 284 aa12.96□□□□□ -0.33
CACNA1C-202ENST00000335762 GSE1Q14687 1217 aa12.96□□□□□ -0.33
CACNA1C-202ENST00000335762 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
CACNA1C-202ENST00000335762 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
CACNA1C-202ENST00000335762 SAFB2Q14151 953 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1C-202ENST00000335762 H3BQV1 296 aa12.96□□□□□ -0.34
CACNA1C-202ENST00000335762 HDGFP51858 240 aaKnown RBP12.96□□□□□ -0.34
CACNA1C-202ENST00000335762 IFFO2Q5TF58 517 aa12.96□□□□□ -0.34
CACNA1C-202ENST00000335762 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-202ENST00000335762 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
CACNA1C-202ENST00000335762 CHMP4CQ96CF2 233 aa12.94□□□□□ -0.34
CACNA1C-202ENST00000335762 KRI1Q8N9T8 703 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-202ENST00000335762 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
CACNA1C-202ENST00000335762 CDR1P51861 262 aa12.93□□□□□ -0.34
CACNA1C-202ENST00000335762 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-202ENST00000335762 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms