RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
SF1-202ENST00000334944 ANO8Q9HCE9 1232 aaPredicted RBP19.46■□□□□ 0.71
SF1-202ENST00000334944 TCOF1Q13428 1488 aaKnown RBP19.45■□□□□ 0.7
SF1-202ENST00000334944 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
SF1-202ENST00000334944 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
SF1-202ENST00000334944 CFDP1Q9UEE9 299 aaPredicted RBP19.43■□□□□ 0.7
SF1-202ENST00000334944 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
SF1-202ENST00000334944 ERICH6Q7L0X2 663 aa19.42■□□□□ 0.7
SF1-202ENST00000334944 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
SF1-202ENST00000334944 L3MBTL2Q969R5 705 aa19.4■□□□□ 0.7
SF1-202ENST00000334944 RAPGEF6Q8TEU7 1601 aa19.4■□□□□ 0.7
SF1-202ENST00000334944 DAPK1P53355 1430 aa19.4■□□□□ 0.7
SF1-202ENST00000334944 ANP32CO43423 234 aa19.4■□□□□ 0.7
SF1-202ENST00000334944 ABCC5O15440 1437 aa19.4■□□□□ 0.7
SF1-202ENST00000334944 SYNJ2O15056 1496 aa19.39■□□□□ 0.69
SF1-202ENST00000334944 SLC4A1APQ9BWU0 796 aaKnown RBP19.38■□□□□ 0.69
SF1-202ENST00000334944 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
SF1-202ENST00000334944 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
SF1-202ENST00000334944 KDM5BQ9UGL1 1544 aa19.36■□□□□ 0.69
SF1-202ENST00000334944 NEFLP07196 543 aa19.35■□□□□ 0.69
SF1-202ENST00000334944 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
SF1-202ENST00000334944 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
SF1-202ENST00000334944 DEKP35659 375 aaKnown RBP19.31■□□□□ 0.68
SF1-202ENST00000334944 KIF14Q15058 1648 aa19.31■□□□□ 0.68
SF1-202ENST00000334944 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
SF1-202ENST00000334944 ZNF326Q5BKZ1 582 aaKnown RBP19.31■□□□□ 0.68
SF1-202ENST00000334944 NBPF8Q3BBV2 869 aa19.3■□□□□ 0.68
SF1-202ENST00000334944 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
SF1-202ENST00000334944 PLEKHD1A6NEE1 506 aa19.29■□□□□ 0.68
SF1-202ENST00000334944 CNGB1Q14028 1251 aaPredicted RBP19.29■□□□□ 0.68
SF1-202ENST00000334944 AKNAQ7Z591 1439 aa19.28■□□□□ 0.68
SF1-202ENST00000334944 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
SF1-202ENST00000334944 GPATCH8Q9UKJ3 1502 aaKnown RBP19.27■□□□□ 0.68
SF1-202ENST00000334944 C11orf95C9JLR9 678 aaPredicted RBP19.27■□□□□ 0.68
SF1-202ENST00000334944 EIF4G2P78344 907 aaKnown RBP eCLIP19.27■□□□□ 0.681e-7■■□□□ 12.5
SF1-202ENST00000334944 IRX6P78412 446 aaPredicted RBP19.26■□□□□ 0.67
SF1-202ENST00000334944 DNMT1P26358 1616 aaKnown RBP19.26■□□□□ 0.67
SF1-202ENST00000334944 NUP160Q12769 1436 aa19.26■□□□□ 0.67
SF1-202ENST00000334944 CCDC136Q96JN2 1154 aa19.26■□□□□ 0.67
SF1-202ENST00000334944 ANKRD30BQ9BXX2 1392 aa19.25■□□□□ 0.67
SF1-202ENST00000334944 ROCK1Q13464 1354 aa19.24■□□□□ 0.67
SF1-202ENST00000334944 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
SF1-202ENST00000334944 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
SF1-202ENST00000334944 PKD2Q13563 968 aa19.21■□□□□ 0.67
SF1-202ENST00000334944 NCOA1Q15788 1441 aa19.21■□□□□ 0.67
SF1-202ENST00000334944 POLR3GLQ9BT43 218 aa19.21■□□□□ 0.67
SF1-202ENST00000334944 ATP10BO94823 1461 aa19.2■□□□□ 0.66
SF1-202ENST00000334944 CCER2I3L3R5 266 aa19.2■□□□□ 0.66
SF1-202ENST00000334944 NBR1Q14596 966 aa19.2■□□□□ 0.66
SF1-202ENST00000334944 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
SF1-202ENST00000334944 PTPRGP23470 1445 aa19.16■□□□□ 0.66
SF1-202ENST00000334944 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
SF1-202ENST00000334944 PZPP20742 1482 aa19.16■□□□□ 0.66
SF1-202ENST00000334944 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.66
SF1-202ENST00000334944 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
SF1-202ENST00000334944 TSPY4P0CV99 314 aa19.14■□□□□ 0.65
SF1-202ENST00000334944 TSPY10P0CW01 314 aa19.14■□□□□ 0.65
SF1-202ENST00000334944 NUP155O75694 1391 aa19.13■□□□□ 0.65
SF1-202ENST00000334944 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
SF1-202ENST00000334944 TEX14Q8IWB6 1497 aa19.12■□□□□ 0.65
SF1-202ENST00000334944 RTN4Q9NQC3 1192 aaKnown RBP19.12■□□□□ 0.65
SF1-202ENST00000334944 KDM2AQ9Y2K7 1162 aa19.12■□□□□ 0.65
SF1-202ENST00000334944 ABCA8O94911 1581 aa19.11■□□□□ 0.65
SF1-202ENST00000334944 ITSN2Q9NZM3 1697 aa19.1■□□□□ 0.65
SF1-202ENST00000334944 FANCIQ9NVI1 1328 aa19.1■□□□□ 0.65
SF1-202ENST00000334944 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
SF1-202ENST00000334944 CCDC7Q96M83 1385 aa19.08■□□□□ 0.65
SF1-202ENST00000334944 ABCC10Q5T3U5 1492 aa19.07■□□□□ 0.64
SF1-202ENST00000334944 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
SF1-202ENST00000334944 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
SF1-202ENST00000334944 CDC42BPAQ5VT25 1732 aa19.07■□□□□ 0.64
SF1-202ENST00000334944 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
SF1-202ENST00000334944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.644e-9■■■□□ 19.2
SF1-202ENST00000334944 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.06■□□□□ 0.64
SF1-202ENST00000334944 KIAA1107Q9UPP5 1409 aa19.06■□□□□ 0.64
SF1-202ENST00000334944 ADCY10Q96PN6 1610 aa19.05■□□□□ 0.64
SF1-202ENST00000334944 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
SF1-202ENST00000334944 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
SF1-202ENST00000334944 ERCC6L2Q5T890 1561 aa19.03■□□□□ 0.64
SF1-202ENST00000334944 ADGRL2O95490 1459 aa19.02■□□□□ 0.63
SF1-202ENST00000334944 ADGBQ8N7X0 1667 aa19.02■□□□□ 0.63
SF1-202ENST00000334944 PRKRIP1Q9H875 184 aaPredicted RBP19.02■□□□□ 0.63
SF1-202ENST00000334944 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
SF1-202ENST00000334944 CHD1O14646 1710 aa19■□□□□ 0.63
SF1-202ENST00000334944 CROCC2H7BZ55 1655 aa19■□□□□ 0.63
SF1-202ENST00000334944 IL27Q8NEV9 243 aa19■□□□□ 0.63
SF1-202ENST00000334944 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
SF1-202ENST00000334944 RGL3Q3MIN7 710 aa18.99■□□□□ 0.63
SF1-202ENST00000334944 SPATA31E1Q6ZUB1 1445 aa18.98■□□□□ 0.63
SF1-202ENST00000334944 USP47Q96K76 1375 aa18.98■□□□□ 0.63
SF1-202ENST00000334944 PAK3O75914 559 aaPredicted RBP18.97■□□□□ 0.63
SF1-202ENST00000334944 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
SF1-202ENST00000334944 MBD5Q9P267 1494 aa18.96■□□□□ 0.63
SF1-202ENST00000334944 SAMD9LQ8IVG5 1584 aa18.93■□□□□ 0.62
SF1-202ENST00000334944 ARHGAP5Q13017 1502 aa18.92■□□□□ 0.62
SF1-202ENST00000334944 SYCP2Q9BX26 1530 aa18.91■□□□□ 0.62
SF1-202ENST00000334944 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
SF1-202ENST00000334944 CDC42BPBQ9Y5S2 1711 aa18.9■□□□□ 0.62
SF1-202ENST00000334944 TTC37Q6PGP7 1564 aa18.9■□□□□ 0.62
SF1-202ENST00000334944 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms