RNA–Protein interactions for RNA: ENST00000334295.8

TPGS2-201, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPGS2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-201ENST00000334295 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
TPGS2-201ENST00000334295 PKD2Q13563 968 aa20.68■□□□□ 0.9
TPGS2-201ENST00000334295 CNTLNQ9NXG0 1405 aa20.67■□□□□ 0.9
TPGS2-201ENST00000334295 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
TPGS2-201ENST00000334295 CHMP7Q8WUX9 453 aaPredicted RBP20.66■□□□□ 0.9
TPGS2-201ENST00000334295 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
TPGS2-201ENST00000334295 SAMD9Q5K651 1589 aa20.65■□□□□ 0.9
TPGS2-201ENST00000334295 PPP4R2Q9NY27 417 aa20.64■□□□□ 0.9
TPGS2-201ENST00000334295 DENND4BO75064 1496 aaPredicted RBP20.64■□□□□ 0.89
TPGS2-201ENST00000334295 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
TPGS2-201ENST00000334295 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
TPGS2-201ENST00000334295 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
TPGS2-201ENST00000334295 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
TPGS2-201ENST00000334295 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
TPGS2-201ENST00000334295 KIF21AQ7Z4S6 1674 aa20.59■□□□□ 0.89
TPGS2-201ENST00000334295 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
TPGS2-201ENST00000334295 DAPK1P53355 1430 aa20.58■□□□□ 0.89
TPGS2-201ENST00000334295 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.88
TPGS2-201ENST00000334295 IQGAP2Q13576 1575 aa20.58■□□□□ 0.88
TPGS2-201ENST00000334295 CARD11Q9BXL7 1154 aa20.58■□□□□ 0.88
TPGS2-201ENST00000334295 HECW1Q76N89 1606 aa20.57■□□□□ 0.88
TPGS2-201ENST00000334295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.56■□□□□ 0.884e-8■□□□□ 8.6
TPGS2-201ENST00000334295 ABCC5O15440 1437 aa20.56■□□□□ 0.88
TPGS2-201ENST00000334295 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
TPGS2-201ENST00000334295 NBR1Q14596 966 aa20.54■□□□□ 0.88
TPGS2-201ENST00000334295 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
TPGS2-201ENST00000334295 AKNAQ7Z591 1439 aa20.54■□□□□ 0.88
TPGS2-201ENST00000334295 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
TPGS2-201ENST00000334295 ZBED9Q6R2W3 1325 aa20.52■□□□□ 0.88
TPGS2-201ENST00000334295 USP47Q96K76 1375 aa20.52■□□□□ 0.88
TPGS2-201ENST00000334295 MIA2Q96PC5 1412 aa20.51■□□□□ 0.87
TPGS2-201ENST00000334295 HNRNPMP52272 730 aaKnown RBP eCLIP20.5■□□□□ 0.87
TPGS2-201ENST00000334295 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
TPGS2-201ENST00000334295 NUP155O75694 1391 aa20.5■□□□□ 0.87
TPGS2-201ENST00000334295 TCOF1Q13428 1488 aaKnown RBP20.49■□□□□ 0.87
TPGS2-201ENST00000334295 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
TPGS2-201ENST00000334295 ST20-MTHFSA0A0A6YYL1 179 aa20.49■□□□□ 0.87
TPGS2-201ENST00000334295 PLEKHD1A6NEE1 506 aa20.48■□□□□ 0.87
TPGS2-201ENST00000334295 NPM2Q86SE8 214 aaKnown RBP20.48■□□□□ 0.87
TPGS2-201ENST00000334295 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
TPGS2-201ENST00000334295 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
TPGS2-201ENST00000334295 RPRD2Q5VT52 1461 aaKnown RBP20.47■□□□□ 0.87
TPGS2-201ENST00000334295 PLB1Q6P1J6 1458 aa20.46■□□□□ 0.87
TPGS2-201ENST00000334295 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
TPGS2-201ENST00000334295 WDR62O43379 1518 aa20.45■□□□□ 0.86
TPGS2-201ENST00000334295 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
TPGS2-201ENST00000334295 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
TPGS2-201ENST00000334295 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
TPGS2-201ENST00000334295 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
TPGS2-201ENST00000334295 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
TPGS2-201ENST00000334295 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
TPGS2-201ENST00000334295 TEX14Q8IWB6 1497 aa20.4■□□□□ 0.86
TPGS2-201ENST00000334295 PBRM1Q86U86 1689 aa20.39■□□□□ 0.85
TPGS2-201ENST00000334295 ANKRD30AQ9BXX3 1397 aa20.39■□□□□ 0.85
TPGS2-201ENST00000334295 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
TPGS2-201ENST00000334295 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
TPGS2-201ENST00000334295 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
TPGS2-201ENST00000334295 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
TPGS2-201ENST00000334295 ROCK1Q13464 1354 aa20.37■□□□□ 0.85
TPGS2-201ENST00000334295 ANKRD50Q9ULJ7 1429 aa20.36■□□□□ 0.85
TPGS2-201ENST00000334295 DISP1Q96F81 1524 aa20.35■□□□□ 0.85
TPGS2-201ENST00000334295 PAK3O75914 559 aaPredicted RBP20.34■□□□□ 0.85
TPGS2-201ENST00000334295 PZPP20742 1482 aa20.34■□□□□ 0.85
TPGS2-201ENST00000334295 KIAA1107Q9UPP5 1409 aa20.34■□□□□ 0.85
TPGS2-201ENST00000334295 TROQ12816 1431 aaPredicted RBP20.33■□□□□ 0.85
TPGS2-201ENST00000334295 KIAA0586Q9BVV6 1533 aa20.33■□□□□ 0.85
TPGS2-201ENST00000334295 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
TPGS2-201ENST00000334295 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
TPGS2-201ENST00000334295 ROCK2O75116 1388 aaKnown RBP20.31■□□□□ 0.84
TPGS2-201ENST00000334295 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
TPGS2-201ENST00000334295 ERICH6BQ5W0A0 696 aa20.31■□□□□ 0.84
TPGS2-201ENST00000334295 MYT1LQ9UL68 1186 aa20.31■□□□□ 0.84
TPGS2-201ENST00000334295 DHX29Q7Z478 1369 aaKnown RBP20.31■□□□□ 0.84
TPGS2-201ENST00000334295 GPATCH8Q9UKJ3 1502 aaKnown RBP20.29■□□□□ 0.84
TPGS2-201ENST00000334295 PLIN1O60240 522 aa20.29■□□□□ 0.84
TPGS2-201ENST00000334295 ANP32AP39687 249 aaKnown RBP20.29■□□□□ 0.84
TPGS2-201ENST00000334295 KIAA0556O60303 1618 aa20.29■□□□□ 0.84
TPGS2-201ENST00000334295 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
TPGS2-201ENST00000334295 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
TPGS2-201ENST00000334295 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
TPGS2-201ENST00000334295 DNMT1P26358 1616 aaKnown RBP20.28■□□□□ 0.84
TPGS2-201ENST00000334295 SKAP1Q86WV1 359 aa20.27■□□□□ 0.84
TPGS2-201ENST00000334295 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.84
TPGS2-201ENST00000334295 CDCA7LQ96GN5 454 aa20.27■□□□□ 0.83
TPGS2-201ENST00000334295 KIF14Q15058 1648 aa20.26■□□□□ 0.83
TPGS2-201ENST00000334295 KIF15Q9NS87 1388 aa20.25■□□□□ 0.83
TPGS2-201ENST00000334295 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
TPGS2-201ENST00000334295 CARMIL2Q6F5E8 1435 aa20.24■□□□□ 0.83
TPGS2-201ENST00000334295 C9orf84Q5VXU9 1444 aa20.23■□□□□ 0.83
TPGS2-201ENST00000334295 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
TPGS2-201ENST00000334295 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
TPGS2-201ENST00000334295 BCORL1Q5H9F3 1711 aa20.21■□□□□ 0.83
TPGS2-201ENST00000334295 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
TPGS2-201ENST00000334295 MYBBP1AQ9BQG0 1328 aaKnown RBP20.2■□□□□ 0.82
TPGS2-201ENST00000334295 ZBTB47Q9UFB7 747 aaPredicted RBP20.2■□□□□ 0.82
TPGS2-201ENST00000334295 LAS1LQ9Y4W2 734 aaKnown RBP20.18■□□□□ 0.82
TPGS2-201ENST00000334295 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
TPGS2-201ENST00000334295 PANK3Q9H999 370 aa20.16■□□□□ 0.82
TPGS2-201ENST00000334295 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
TPGS2-201ENST00000334295 KTN1Q86UP2 1357 aaKnown RBP20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms