RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CFDP1Q9UEE9 299 aaPredicted RBP26.77■■□□□ 1.88
RFTN1-201ENST00000334133 GCC2Q8IWJ2 1684 aa26.77■■□□□ 1.88
RFTN1-201ENST00000334133 ABCC5O15440 1437 aa26.77■■□□□ 1.88
RFTN1-201ENST00000334133 KDM5BQ9UGL1 1544 aa26.74■■□□□ 1.87
RFTN1-201ENST00000334133 ANP32CO43423 234 aa26.73■■□□□ 1.87
RFTN1-201ENST00000334133 L3MBTL2Q969R5 705 aa26.73■■□□□ 1.87
RFTN1-201ENST00000334133 SLC4A1APQ9BWU0 796 aaKnown RBP26.7■■□□□ 1.87
RFTN1-201ENST00000334133 HSPA5P11021 654 aaKnown RBP26.69■■□□□ 1.86
RFTN1-201ENST00000334133 TROQ12816 1431 aaPredicted RBP26.68■■□□□ 1.86
RFTN1-201ENST00000334133 AKNAQ7Z591 1439 aa26.68■■□□□ 1.86
RFTN1-201ENST00000334133 SUPT16HQ9Y5B9 1047 aaKnown RBP26.68■■□□□ 1.86
RFTN1-201ENST00000334133 CARMIL2Q6F5E8 1435 aa26.67■■□□□ 1.86
RFTN1-201ENST00000334133 KIF14Q15058 1648 aa26.66■■□□□ 1.86
RFTN1-201ENST00000334133 DNMT1P26358 1616 aaKnown RBP26.64■■□□□ 1.85
RFTN1-201ENST00000334133 CAMSAP2Q08AD1 1489 aa26.62■■□□□ 1.85
RFTN1-201ENST00000334133 NUP160Q12769 1436 aa26.62■■□□□ 1.85
RFTN1-201ENST00000334133 GPATCH8Q9UKJ3 1502 aaKnown RBP26.61■■□□□ 1.85
RFTN1-201ENST00000334133 ROCK1Q13464 1354 aa26.61■■□□□ 1.85
RFTN1-201ENST00000334133 PLEKHD1A6NEE1 506 aa26.6■■□□□ 1.85
RFTN1-201ENST00000334133 WASHC2AQ641Q2 1341 aa26.59■■□□□ 1.85
RFTN1-201ENST00000334133 NBPF8Q3BBV2 869 aa26.58■■□□□ 1.85
RFTN1-201ENST00000334133 EIF4G2P78344 907 aaKnown RBP eCLIP26.57■■□□□ 1.84
RFTN1-201ENST00000334133 ANKRD30BQ9BXX2 1392 aa26.57■■□□□ 1.84
RFTN1-201ENST00000334133 BCANQ96GW7 911 aa26.54■■□□□ 1.84
RFTN1-201ENST00000334133 C11orf95C9JLR9 678 aaPredicted RBP26.53■■□□□ 1.84
RFTN1-201ENST00000334133 ZNF326Q5BKZ1 582 aaKnown RBP26.52■■□□□ 1.84
RFTN1-201ENST00000334133 CCER2I3L3R5 266 aa26.52■■□□□ 1.84
RFTN1-201ENST00000334133 NCOA1Q15788 1441 aa26.52■■□□□ 1.84
RFTN1-201ENST00000334133 ATP10BO94823 1461 aa26.51■■□□□ 1.83
RFTN1-201ENST00000334133 HNRNPMP52272 730 aaKnown RBP eCLIP26.48■■□□□ 1.83
RFTN1-201ENST00000334133 PKD2Q13563 968 aa26.47■■□□□ 1.83
RFTN1-201ENST00000334133 RPRD2Q5VT52 1461 aaKnown RBP26.47■■□□□ 1.83
RFTN1-201ENST00000334133 PZPP20742 1482 aa26.45■■□□□ 1.82
RFTN1-201ENST00000334133 ITSN2Q9NZM3 1697 aa26.45■■□□□ 1.82
RFTN1-201ENST00000334133 CNGB1Q14028 1251 aaPredicted RBP26.44■■□□□ 1.82
RFTN1-201ENST00000334133 PTPRGP23470 1445 aa26.43■■□□□ 1.82
RFTN1-201ENST00000334133 ABCA8O94911 1581 aa26.43■■□□□ 1.82
RFTN1-201ENST00000334133 FKBP8Q14318 412 aa26.42■■□□□ 1.82
RFTN1-201ENST00000334133 ANKRD30AQ9BXX3 1397 aa26.42■■□□□ 1.82
RFTN1-201ENST00000334133 TEX14Q8IWB6 1497 aa26.41■■□□□ 1.82
RFTN1-201ENST00000334133 POLR3GLQ9BT43 218 aa26.39■■□□□ 1.81
RFTN1-201ENST00000334133 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.81
RFTN1-201ENST00000334133 ANKRD50Q9ULJ7 1429 aa26.39■■□□□ 1.81
RFTN1-201ENST00000334133 TSPY4P0CV99 314 aa26.38■■□□□ 1.81
RFTN1-201ENST00000334133 TSPY10P0CW01 314 aa26.38■■□□□ 1.81
RFTN1-201ENST00000334133 CCDC184Q52MB2 194 aa26.38■■□□□ 1.81
RFTN1-201ENST00000334133 CDC42BPAQ5VT25 1732 aa26.37■■□□□ 1.81
RFTN1-201ENST00000334133 ABCC10Q5T3U5 1492 aa26.36■■□□□ 1.81
RFTN1-201ENST00000334133 NUP155O75694 1391 aa26.36■■□□□ 1.81
RFTN1-201ENST00000334133 HNRNPUQ00839 825 aaKnown RBP eCLIP26.35■■□□□ 1.81
RFTN1-201ENST00000334133 C9orf84Q5VXU9 1444 aa26.34■■□□□ 1.81
RFTN1-201ENST00000334133 ADGBQ8N7X0 1667 aa26.33■■□□□ 1.81
RFTN1-201ENST00000334133 CCDC7Q96M83 1385 aa26.33■■□□□ 1.81
RFTN1-201ENST00000334133 KIAA1107Q9UPP5 1409 aa26.32■■□□□ 1.8
RFTN1-201ENST00000334133 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
RFTN1-201ENST00000334133 CROCC2H7BZ55 1655 aa26.31■■□□□ 1.8
RFTN1-201ENST00000334133 KDM2AQ9Y2K7 1162 aa26.29■■□□□ 1.8
RFTN1-201ENST00000334133 KIF7Q2M1P5 1343 aa26.28■■□□□ 1.8
RFTN1-201ENST00000334133 CNTLNQ9NXG0 1405 aa26.27■■□□□ 1.8
RFTN1-201ENST00000334133 CHD1O14646 1710 aa26.27■■□□□ 1.8
RFTN1-201ENST00000334133 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
RFTN1-201ENST00000334133 FAM9BQ8IZU0 186 aa26.24■■□□□ 1.79
RFTN1-201ENST00000334133 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
RFTN1-201ENST00000334133 PRKRIP1Q9H875 184 aaPredicted RBP26.22■■□□□ 1.79
RFTN1-201ENST00000334133 NEFLP07196 543 aa26.22■■□□□ 1.79
RFTN1-201ENST00000334133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.22■■□□□ 1.79
RFTN1-201ENST00000334133 SPATA31E1Q6ZUB1 1445 aa26.21■■□□□ 1.79
RFTN1-201ENST00000334133 MRS2Q9HD23 443 aa26.18■■□□□ 1.78
RFTN1-201ENST00000334133 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
RFTN1-201ENST00000334133 USP47Q96K76 1375 aa26.17■■□□□ 1.78
RFTN1-201ENST00000334133 IRX6P78412 446 aaPredicted RBP26.17■■□□□ 1.78
RFTN1-201ENST00000334133 DCAF11Q8TEB1 546 aa26.16■■□□□ 1.78
RFTN1-201ENST00000334133 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
RFTN1-201ENST00000334133 SHANK2Q9UPX8 1470 aa26.14■■□□□ 1.77
RFTN1-201ENST00000334133 CDC42BPBQ9Y5S2 1711 aa26.13■■□□□ 1.77
RFTN1-201ENST00000334133 SENP3-EIF4A1A0A087X0R7 540 aa26.12■■□□□ 1.77
RFTN1-201ENST00000334133 RGL3Q3MIN7 710 aa26.12■■□□□ 1.77
RFTN1-201ENST00000334133 CARD11Q9BXL7 1154 aa26.12■■□□□ 1.77
RFTN1-201ENST00000334133 TSHZ2Q9NRE2 1034 aa26.11■■□□□ 1.77
RFTN1-201ENST00000334133 ARHGAP5Q13017 1502 aa26.11■■□□□ 1.77
RFTN1-201ENST00000334133 CCDC141Q6ZP82 1450 aa26.1■■□□□ 1.77
RFTN1-201ENST00000334133 SYCP2Q9BX26 1530 aa26.1■■□□□ 1.77
RFTN1-201ENST00000334133 TTC37Q6PGP7 1564 aa26.09■■□□□ 1.77
RFTN1-201ENST00000334133 BCORL1Q5H9F3 1711 aa26.06■■□□□ 1.76
RFTN1-201ENST00000334133 PREX2Q70Z35 1606 aa26.05■■□□□ 1.76
RFTN1-201ENST00000334133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.05■■□□□ 1.76
RFTN1-201ENST00000334133 ARHGEF5Q12774 1597 aa26.03■■□□□ 1.76
RFTN1-201ENST00000334133 ST20-MTHFSA0A0A6YYL1 179 aa26.03■■□□□ 1.76
RFTN1-201ENST00000334133 FAM135AQ9P2D6 1515 aa25.99■■□□□ 1.75
RFTN1-201ENST00000334133 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
RFTN1-201ENST00000334133 RSPH4AQ5TD94 716 aa25.98■■□□□ 1.75
RFTN1-201ENST00000334133 ABCC2Q92887 1545 aa25.97■■□□□ 1.75
RFTN1-201ENST00000334133 PLEKHH2Q8IVE3 1493 aa25.96■■□□□ 1.75
RFTN1-201ENST00000334133 KDM5CP41229 1560 aa25.96■■□□□ 1.75
RFTN1-201ENST00000334133 DHX29Q7Z478 1369 aaKnown RBP25.95■■□□□ 1.75
RFTN1-201ENST00000334133 KDM5DQ9BY66 1539 aa25.95■■□□□ 1.75
RFTN1-201ENST00000334133 ARHGEF12Q9NZN5 1544 aa25.94■■□□□ 1.74
RFTN1-201ENST00000334133 NBPF1Q3BBV0 1214 aa25.94■■□□□ 1.74
RFTN1-201ENST00000334133 ROCK2O75116 1388 aaKnown RBP25.93■■□□□ 1.74
RFTN1-201ENST00000334133 CCDC144AA2RUR9 1427 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms