RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 HAP1P54257 671 aaPredicted RBP27.55■■■□□ 2
HOMER1-202ENST00000334082 CALD1Q05682 793 aaKnown RBP27.55■■■□□ 2
HOMER1-202ENST00000334082 CCER2I3L3R5 266 aa27.55■■■□□ 2
HOMER1-202ENST00000334082 NPHP1O15259 732 aa27.52■■■□□ 2
HOMER1-202ENST00000334082 ZNF771Q7L3S4 317 aaPredicted RBP27.49■■□□□ 1.99
HOMER1-202ENST00000334082 APBB1O00213 710 aa27.47■■□□□ 1.99
HOMER1-202ENST00000334082 KCNH8Q96L42 1107 aa27.47■■□□□ 1.99
HOMER1-202ENST00000334082 SIN3AQ96ST3 1273 aa27.47■■□□□ 1.99
HOMER1-202ENST00000334082 CSPP1Q1MSJ5 1256 aa27.46■■□□□ 1.99
HOMER1-202ENST00000334082 MFAP1P55081 439 aaKnown RBP27.45■■□□□ 1.99
HOMER1-202ENST00000334082 RWDD1Q9H446 243 aaPredicted RBP27.45■■□□□ 1.99
HOMER1-202ENST00000334082 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
HOMER1-202ENST00000334082 ISY1Q9ULR0 285 aaKnown RBP27.44■■□□□ 1.98
HOMER1-202ENST00000334082 HSP90B1P14625 803 aaKnown RBP27.43■■□□□ 1.98
HOMER1-202ENST00000334082 PHF14O94880 888 aa27.43■■□□□ 1.98
HOMER1-202ENST00000334082 PDE4CQ08493 712 aa27.42■■□□□ 1.98
HOMER1-202ENST00000334082 TPM3P06753 285 aa27.42■■□□□ 1.98
HOMER1-202ENST00000334082 RCAN3Q9UKA8 241 aa27.4■■□□□ 1.98
HOMER1-202ENST00000334082 IPO8O15397 1037 aaKnown RBP27.4■■□□□ 1.98
HOMER1-202ENST00000334082 CCDC34Q96HJ3 373 aa27.38■■□□□ 1.97
HOMER1-202ENST00000334082 POGKQ9P215 609 aa27.38■■□□□ 1.97
HOMER1-202ENST00000334082 PLEKHD1A6NEE1 506 aa27.38■■□□□ 1.97
HOMER1-202ENST00000334082 DDX11L8A8MPP1 907 aa27.36■■□□□ 1.97
HOMER1-202ENST00000334082 FOXD4L1Q9NU39 408 aa27.36■■□□□ 1.97
HOMER1-202ENST00000334082 PRM3Q9NNZ6 103 aa27.36■■□□□ 1.97
HOMER1-202ENST00000334082 TMF1P82094 1093 aa27.36■■□□□ 1.97
HOMER1-202ENST00000334082 ITPRIPQ8IWB1 547 aa27.34■■□□□ 1.97
HOMER1-202ENST00000334082 GPS2Q13227 327 aa27.34■■□□□ 1.97
HOMER1-202ENST00000334082 PMFBP1Q8TBY8 1022 aa27.33■■□□□ 1.97
HOMER1-202ENST00000334082 GSE1Q14687 1217 aa27.33■■□□□ 1.97
HOMER1-202ENST00000334082 PATL2C9JE40 543 aaKnown RBP27.32■■□□□ 1.96
HOMER1-202ENST00000334082 CEP162Q5TB80 1403 aa27.32■■□□□ 1.96
HOMER1-202ENST00000334082 CREBRFQ8IUR6 639 aa27.3■■□□□ 1.96
HOMER1-202ENST00000334082 LMOD2Q6P5Q4 547 aa27.29■■□□□ 1.96
HOMER1-202ENST00000334082 TIMELESSQ9UNS1 1208 aa27.28■■□□□ 1.96
HOMER1-202ENST00000334082 CCAR2Q8N163 923 aaKnown RBP27.28■■□□□ 1.96
HOMER1-202ENST00000334082 MORC1Q86VD1 984 aa27.26■■□□□ 1.95
HOMER1-202ENST00000334082 NOL8Q76FK4 1167 aaKnown RBP27.24■■□□□ 1.95
HOMER1-202ENST00000334082 CEP89Q96ST8 783 aa27.24■■□□□ 1.95
HOMER1-202ENST00000334082 GOLGA3Q08378 1498 aa27.23■■□□□ 1.95
HOMER1-202ENST00000334082 TEX35Q5T0J7 233 aa27.23■■□□□ 1.95
HOMER1-202ENST00000334082 FAM13BQ9NYF5 915 aa27.23■■□□□ 1.95
HOMER1-202ENST00000334082 RASSF8Q8NHQ8 419 aa27.21■■□□□ 1.95
HOMER1-202ENST00000334082 RTF1Q92541 710 aaKnown RBP27.21■■□□□ 1.95
HOMER1-202ENST00000334082 KTN1Q86UP2 1357 aaKnown RBP27.21■■□□□ 1.95
HOMER1-202ENST00000334082 FOXD4L5Q5VV16 416 aaPredicted RBP27.2■■□□□ 1.95
HOMER1-202ENST00000334082 FOXD4L4Q8WXT5 416 aaPredicted RBP27.2■■□□□ 1.95
HOMER1-202ENST00000334082 ST18O60284 1047 aa27.19■■□□□ 1.94
HOMER1-202ENST00000334082 SKOR2Q2VWA4 1001 aaPredicted RBP27.19■■□□□ 1.94
HOMER1-202ENST00000334082 TRIM6-TRIM34B2RNG4 842 aa27.19■■□□□ 1.94
HOMER1-202ENST00000334082 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
HOMER1-202ENST00000334082 DDX49Q9Y6V7 483 aaKnown RBP27.18■■□□□ 1.94
HOMER1-202ENST00000334082 CCDC70Q6NSX1 233 aa27.17■■□□□ 1.94
HOMER1-202ENST00000334082 ZNF592Q92610 1267 aa27.16■■□□□ 1.94
HOMER1-202ENST00000334082 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
HOMER1-202ENST00000334082 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
HOMER1-202ENST00000334082 EEA1Q15075 1411 aa27.15■■□□□ 1.94
HOMER1-202ENST00000334082 GOLGA6L19H0YKK7 550 aa27.15■■□□□ 1.94
HOMER1-202ENST00000334082 HSPA5P11021 654 aaKnown RBP27.15■■□□□ 1.94
HOMER1-202ENST00000334082 GPATCH3Q96I76 525 aa27.14■■□□□ 1.93
HOMER1-202ENST00000334082 KIF16BQ96L93 1317 aa27.14■■□□□ 1.93
HOMER1-202ENST00000334082 SF3A1Q15459 793 aaKnown RBP27.12■■□□□ 1.93
HOMER1-202ENST00000334082 DCAF11Q8TEB1 546 aa27.12■■□□□ 1.93
HOMER1-202ENST00000334082 TSR1Q2NL82 804 aaKnown RBP27.12■■□□□ 1.93
HOMER1-202ENST00000334082 PES1O00541 588 aaKnown RBP27.1■■□□□ 1.93
HOMER1-202ENST00000334082 NOM1Q5C9Z4 860 aaKnown RBP27.1■■□□□ 1.93
HOMER1-202ENST00000334082 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.93
HOMER1-202ENST00000334082 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.09■■□□□ 1.93
HOMER1-202ENST00000334082 TPD52L1Q16890 204 aaPredicted RBP27.09■■□□□ 1.93
HOMER1-202ENST00000334082 BECN2A8MW95 431 aa27.08■■□□□ 1.93
HOMER1-202ENST00000334082 SOX12O15370 315 aa27.08■■□□□ 1.93
HOMER1-202ENST00000334082 SLC4A3P48751 1232 aa27.08■■□□□ 1.92
HOMER1-202ENST00000334082 RRP12Q5JTH9 1297 aaKnown RBP27.06■■□□□ 1.92
HOMER1-202ENST00000334082 KIF3AQ9Y496 699 aa27.06■■□□□ 1.92
HOMER1-202ENST00000334082 HMMRO75330 724 aa27.06■■□□□ 1.92
HOMER1-202ENST00000334082 SRPK2P78362 688 aaKnown RBP27.06■■□□□ 1.92
HOMER1-202ENST00000334082 TPM1P09493 284 aa27.05■■□□□ 1.92
HOMER1-202ENST00000334082 SMC4Q9NTJ3 1288 aa27.04■■□□□ 1.92
HOMER1-202ENST00000334082 APPP05067 770 aa27.04■■□□□ 1.92
HOMER1-202ENST00000334082 RALBP1Q15311 655 aa27.04■■□□□ 1.92
HOMER1-202ENST00000334082 KIF27Q86VH2 1401 aa27.03■■□□□ 1.92
HOMER1-202ENST00000334082 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
HOMER1-202ENST00000334082 GORABQ5T7V8 394 aa27.03■■□□□ 1.92
HOMER1-202ENST00000334082 U2AF1L5P0DN76 240 aaPredicted RBP27.01■■□□□ 1.91
HOMER1-202ENST00000334082 U2AF1Q01081 240 aaKnown RBP eCLIP27.01■■□□□ 1.91
HOMER1-202ENST00000334082 FAM43AQ8N2R8 423 aa27.01■■□□□ 1.91
HOMER1-202ENST00000334082 H3BQV1 296 aa27.01■■□□□ 1.91
HOMER1-202ENST00000334082 PDE4AP27815 886 aa27.01■■□□□ 1.91
HOMER1-202ENST00000334082 IFFO2Q5TF58 517 aa27.01■■□□□ 1.91
HOMER1-202ENST00000334082 ATP6V1DQ9Y5K8 247 aa27■■□□□ 1.91
HOMER1-202ENST00000334082 FAM161AQ3B820 660 aa27■■□□□ 1.91
HOMER1-202ENST00000334082 PKNOX2Q96KN3 472 aa26.98■■□□□ 1.91
HOMER1-202ENST00000334082 TPM2P07951 284 aa26.97■■□□□ 1.91
HOMER1-202ENST00000334082 CLUAP1Q96AJ1 413 aa26.96■■□□□ 1.91
HOMER1-202ENST00000334082 FOXD4L6Q3SYB3 417 aaPredicted RBP26.96■■□□□ 1.91
HOMER1-202ENST00000334082 TAF7LQ5H9L4 462 aa26.96■■□□□ 1.91
HOMER1-202ENST00000334082 FOXD4L3Q6VB84 417 aaPredicted RBP26.96■■□□□ 1.91
HOMER1-202ENST00000334082 HOMER1Q86YM7 354 aa26.95■■□□□ 1.91
HOMER1-202ENST00000334082 STK31Q9BXU1 1019 aa26.95■■□□□ 1.91
HOMER1-202ENST00000334082 ANO8Q9HCE9 1232 aaPredicted RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms