RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 BRPF3Q9ULD4 1205 aa15.12■□□□□ 0.01
CCDC87-201ENST00000333861 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
CCDC87-201ENST00000333861 NEFMP07197 916 aa15.11■□□□□ 0.01
CCDC87-201ENST00000333861 SLC4A3P48751 1232 aa15.08■□□□□ 0
CCDC87-201ENST00000333861 IQGAP2Q13576 1575 aa15.07■□□□□ 0
CCDC87-201ENST00000333861 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
CCDC87-201ENST00000333861 JPH4Q96JJ6 628 aa15.06■□□□□ 0
CCDC87-201ENST00000333861 PTPRKQ15262 1439 aa15.06■□□□□ 0
CCDC87-201ENST00000333861 PRKRIP1Q9H875 184 aaPredicted RBP15.06■□□□□ 0
CCDC87-201ENST00000333861 KIAA0586Q9BVV6 1533 aa15.05■□□□□ 0
CCDC87-201ENST00000333861 CEP170Q5SW79 1584 aa15.04■□□□□ -0
CCDC87-201ENST00000333861 UBE2Q2Q8WVN8 375 aa15.04■□□□□ -0
CCDC87-201ENST00000333861 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
CCDC87-201ENST00000333861 TIMELESSQ9UNS1 1208 aa15.03■□□□□ -0
CCDC87-201ENST00000333861 EIF4G2P78344 907 aaKnown RBP eCLIP15.02■□□□□ -0
CCDC87-201ENST00000333861 TIAM1Q13009 1591 aa15.02□□□□□ -0.01
CCDC87-201ENST00000333861 EFCAB5A4FU69 1503 aa15.01□□□□□ -0.01
CCDC87-201ENST00000333861 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
CCDC87-201ENST00000333861 NUP160Q12769 1436 aa14.99□□□□□ -0.01
CCDC87-201ENST00000333861 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
CCDC87-201ENST00000333861 CCDC18Q5T9S5 1454 aa14.98□□□□□ -0.01
CCDC87-201ENST00000333861 PCF11O94913 1555 aaKnown RBP14.98□□□□□ -0.01
CCDC87-201ENST00000333861 PLIN1O60240 522 aa14.97□□□□□ -0.01
CCDC87-201ENST00000333861 EXOC6Q8TAG9 804 aa14.97□□□□□ -0.01
CCDC87-201ENST00000333861 CHD1O14646 1710 aa14.97□□□□□ -0.01
CCDC87-201ENST00000333861 SAMD9Q5K651 1589 aa14.96□□□□□ -0.01
CCDC87-201ENST00000333861 DISP1Q96F81 1524 aa14.95□□□□□ -0.02
CCDC87-201ENST00000333861 UGGT2Q9NYU1 1516 aa14.94□□□□□ -0.02
CCDC87-201ENST00000333861 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
CCDC87-201ENST00000333861 PRG4Q92954 1404 aaPredicted RBP14.92□□□□□ -0.02
CCDC87-201ENST00000333861 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
CCDC87-201ENST00000333861 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
CCDC87-201ENST00000333861 MTUS2Q5JR59 1369 aa14.92□□□□□ -0.02
CCDC87-201ENST00000333861 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
CCDC87-201ENST00000333861 ARXQ96QS3 562 aa14.92□□□□□ -0.02
CCDC87-201ENST00000333861 CARMIL2Q6F5E8 1435 aa14.91□□□□□ -0.02
CCDC87-201ENST00000333861 FYCO1Q9BQS8 1478 aa14.9□□□□□ -0.02
CCDC87-201ENST00000333861 KIAA0556O60303 1618 aa14.9□□□□□ -0.02
CCDC87-201ENST00000333861 CCDC7Q96M83 1385 aa14.89□□□□□ -0.03
CCDC87-201ENST00000333861 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
CCDC87-201ENST00000333861 MPHOSPH9Q99550 1183 aa14.87□□□□□ -0.03
CCDC87-201ENST00000333861 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
CCDC87-201ENST00000333861 PLB1Q6P1J6 1458 aa14.86□□□□□ -0.03
CCDC87-201ENST00000333861 FRAT1Q92837 279 aaPredicted RBP14.86□□□□□ -0.03
CCDC87-201ENST00000333861 PDE4AP27815 886 aa14.86□□□□□ -0.03
CCDC87-201ENST00000333861 CDCA7LQ96GN5 454 aa14.86□□□□□ -0.03
CCDC87-201ENST00000333861 FGD6Q6ZV73 1430 aa14.86□□□□□ -0.03
CCDC87-201ENST00000333861 KDM2AQ9Y2K7 1162 aa14.85□□□□□ -0.03
CCDC87-201ENST00000333861 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
CCDC87-201ENST00000333861 TMC1Q8TDI8 760 aa14.84□□□□□ -0.03
CCDC87-201ENST00000333861 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
CCDC87-201ENST00000333861 NAIPQ13075 1403 aa14.84□□□□□ -0.03
CCDC87-201ENST00000333861 GSE1Q14687 1217 aa14.83□□□□□ -0.03
CCDC87-201ENST00000333861 KDM5BQ9UGL1 1544 aa14.83□□□□□ -0.03
CCDC87-201ENST00000333861 PTPRGP23470 1445 aa14.83□□□□□ -0.04
CCDC87-201ENST00000333861 UACAQ9BZF9 1416 aa14.83□□□□□ -0.04
CCDC87-201ENST00000333861 WASHC2CQ9Y4E1 1318 aa14.83□□□□□ -0.04
CCDC87-201ENST00000333861 ERCC6L2Q5T890 1561 aa14.82□□□□□ -0.04
CCDC87-201ENST00000333861 CFAP43Q8NDM7 1665 aa14.81□□□□□ -0.04
CCDC87-201ENST00000333861 ZNF644Q9H582 1327 aaPredicted RBP14.81□□□□□ -0.04
CCDC87-201ENST00000333861 NFKBIBQ15653 356 aa14.8□□□□□ -0.04
CCDC87-201ENST00000333861 KDM6BO15054 1643 aa14.8□□□□□ -0.04
CCDC87-201ENST00000333861 EPRSP07814 1512 aaKnown RBP14.8□□□□□ -0.04
CCDC87-201ENST00000333861 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
CCDC87-201ENST00000333861 NUP153P49790 1475 aaKnown RBP14.78□□□□□ -0.04
CCDC87-201ENST00000333861 LRRIQ1Q96JM4 1722 aa14.78□□□□□ -0.04
CCDC87-201ENST00000333861 PKNOX2Q96KN3 472 aa14.77□□□□□ -0.04
CCDC87-201ENST00000333861 HECW1Q76N89 1606 aa14.77□□□□□ -0.04
CCDC87-201ENST00000333861 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.05
CCDC87-201ENST00000333861 DENND4BO75064 1496 aaPredicted RBP14.77□□□□□ -0.05
CCDC87-201ENST00000333861 C20orf194Q5TEA3 1177 aa14.76□□□□□ -0.05
CCDC87-201ENST00000333861 DCAF11Q8TEB1 546 aa14.76□□□□□ -0.05
CCDC87-201ENST00000333861 BACH2Q9BYV9 841 aa14.76□□□□□ -0.05
CCDC87-201ENST00000333861 PPM1GO15355 546 aaPredicted RBP14.76□□□□□ -0.05
CCDC87-201ENST00000333861 USP35Q9P2H5 1018 aa14.76□□□□□ -0.05
CCDC87-201ENST00000333861 RAPGEF6Q8TEU7 1601 aa14.75□□□□□ -0.05
CCDC87-201ENST00000333861 ZNF777Q9ULD5 760 aaPredicted RBP14.75□□□□□ -0.05
CCDC87-201ENST00000333861 MAGI3Q5TCQ9 1506 aa14.75□□□□□ -0.05
CCDC87-201ENST00000333861 HFM1A2PYH4 1435 aa14.74□□□□□ -0.05
CCDC87-201ENST00000333861 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
CCDC87-201ENST00000333861 RRP1P56182 461 aaKnown RBP14.73□□□□□ -0.05
CCDC87-201ENST00000333861 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
CCDC87-201ENST00000333861 FRAT2O75474 233 aaPredicted RBP14.73□□□□□ -0.05
CCDC87-201ENST00000333861 RGS3P49796 1198 aa14.73□□□□□ -0.05
CCDC87-201ENST00000333861 NCOA1Q15788 1441 aa14.73□□□□□ -0.05
CCDC87-201ENST00000333861 PNISRQ8TF01 805 aaKnown RBP14.72□□□□□ -0.05
CCDC87-201ENST00000333861 CRBNQ96SW2 442 aa14.72□□□□□ -0.05
CCDC87-201ENST00000333861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCDC87-201ENST00000333861 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
CCDC87-201ENST00000333861 CC2D1BQ5T0F9 858 aaKnown RBP14.71□□□□□ -0.05
CCDC87-201ENST00000333861 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.05
CCDC87-201ENST00000333861 NCOA2Q15596 1464 aa14.71□□□□□ -0.05
CCDC87-201ENST00000333861 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
CCDC87-201ENST00000333861 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
CCDC87-201ENST00000333861 DAXXQ9UER7 740 aaPredicted RBP14.69□□□□□ -0.06
CCDC87-201ENST00000333861 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
CCDC87-201ENST00000333861 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
CCDC87-201ENST00000333861 ATP10BO94823 1461 aa14.68□□□□□ -0.06
CCDC87-201ENST00000333861 MYOM3Q5VTT5 1437 aa14.67□□□□□ -0.06
CCDC87-201ENST00000333861 ABCA8O94911 1581 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms