RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 KIF21BO75037 1637 aa20.37■□□□□ 0.85
SLIT3-201ENST00000332966 MSNP26038 577 aaKnown RBP20.36■□□□□ 0.85
SLIT3-201ENST00000332966 RRP1P56182 461 aaKnown RBP20.36■□□□□ 0.85
SLIT3-201ENST00000332966 PKD2Q13563 968 aa20.34■□□□□ 0.85
SLIT3-201ENST00000332966 EXOC6Q8TAG9 804 aa20.34■□□□□ 0.85
SLIT3-201ENST00000332966 PTMSP20962 102 aa20.32■□□□□ 0.84
SLIT3-201ENST00000332966 CASC1Q6TDU7 716 aa20.32■□□□□ 0.84
SLIT3-201ENST00000332966 SPRYD3Q8NCJ5 442 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 ARID4BQ4LE39 1312 aaPredicted RBP20.31■□□□□ 0.84
SLIT3-201ENST00000332966 FAM161AQ3B820 660 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
SLIT3-201ENST00000332966 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 CCDC18Q5T9S5 1454 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
SLIT3-201ENST00000332966 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 GBP4Q96PP9 640 aa20.29■□□□□ 0.84
SLIT3-201ENST00000332966 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
SLIT3-201ENST00000332966 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
SLIT3-201ENST00000332966 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.83
SLIT3-201ENST00000332966 CNTLNQ9NXG0 1405 aa20.26■□□□□ 0.83
SLIT3-201ENST00000332966 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
SLIT3-201ENST00000332966 MSH5O43196 834 aa20.25■□□□□ 0.83
SLIT3-201ENST00000332966 SLC4A3P48751 1232 aa20.25■□□□□ 0.83
SLIT3-201ENST00000332966 HSP90AA2PQ14568 343 aaPredicted RBP20.25■□□□□ 0.83
SLIT3-201ENST00000332966 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
SLIT3-201ENST00000332966 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
SLIT3-201ENST00000332966 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
SLIT3-201ENST00000332966 MAPK8IP3Q9UPT6 1336 aa20.23■□□□□ 0.83
SLIT3-201ENST00000332966 CCDC7Q96M83 1385 aa20.23■□□□□ 0.83
SLIT3-201ENST00000332966 PAK3O75914 559 aaPredicted RBP20.23■□□□□ 0.83
SLIT3-201ENST00000332966 ANO8Q9HCE9 1232 aaPredicted RBP20.21■□□□□ 0.83
SLIT3-201ENST00000332966 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
SLIT3-201ENST00000332966 WASHC2AQ641Q2 1341 aa20.19■□□□□ 0.82
SLIT3-201ENST00000332966 CRBNQ96SW2 442 aa20.19■□□□□ 0.82
SLIT3-201ENST00000332966 NFKBIBQ15653 356 aa20.18■□□□□ 0.82
SLIT3-201ENST00000332966 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
SLIT3-201ENST00000332966 PLIN1O60240 522 aa20.16■□□□□ 0.82
SLIT3-201ENST00000332966 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
SLIT3-201ENST00000332966 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
SLIT3-201ENST00000332966 STAG3Q9UJ98 1225 aa20.15■□□□□ 0.82
SLIT3-201ENST00000332966 NUP155O75694 1391 aa20.14■□□□□ 0.81
SLIT3-201ENST00000332966 KIF7Q2M1P5 1343 aa20.14■□□□□ 0.81
SLIT3-201ENST00000332966 USP47Q96K76 1375 aa20.14■□□□□ 0.81
SLIT3-201ENST00000332966 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
SLIT3-201ENST00000332966 ANKRD30AQ9BXX3 1397 aa20.13■□□□□ 0.81
SLIT3-201ENST00000332966 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
SLIT3-201ENST00000332966 PRKCSHP14314 528 aaPredicted RBP20.12■□□□□ 0.81
SLIT3-201ENST00000332966 LRRC9Q6ZRR7 1453 aa20.12■□□□□ 0.81
SLIT3-201ENST00000332966 CHAF1AQ13111 956 aaPredicted RBP20.12■□□□□ 0.81
SLIT3-201ENST00000332966 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
SLIT3-201ENST00000332966 MFAP1P55081 439 aaKnown RBP20.1■□□□□ 0.81
SLIT3-201ENST00000332966 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
SLIT3-201ENST00000332966 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
SLIT3-201ENST00000332966 CENPJQ9HC77 1338 aaPredicted RBP20.09■□□□□ 0.81
SLIT3-201ENST00000332966 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
SLIT3-201ENST00000332966 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.81
SLIT3-201ENST00000332966 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
SLIT3-201ENST00000332966 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
SLIT3-201ENST00000332966 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
SLIT3-201ENST00000332966 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
SLIT3-201ENST00000332966 BRPF3Q9ULD4 1205 aa20.06■□□□□ 0.8
SLIT3-201ENST00000332966 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
SLIT3-201ENST00000332966 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
SLIT3-201ENST00000332966 CDK11BP21127 795 aaKnown RBP20.04■□□□□ 0.8
SLIT3-201ENST00000332966 KIAA2012Q0VF49 1180 aa20.03■□□□□ 0.8
SLIT3-201ENST00000332966 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
SLIT3-201ENST00000332966 SMG6Q86US8 1419 aaKnown RBP20.03■□□□□ 0.8
SLIT3-201ENST00000332966 TPRNQ4KMQ1 711 aa20.02■□□□□ 0.8
SLIT3-201ENST00000332966 SKOR2Q2VWA4 1001 aaPredicted RBP20.02■□□□□ 0.8
SLIT3-201ENST00000332966 CALD1Q05682 793 aaKnown RBP20.01■□□□□ 0.79
SLIT3-201ENST00000332966 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
SLIT3-201ENST00000332966 AKNAQ7Z591 1439 aa20.01■□□□□ 0.79
SLIT3-201ENST00000332966 FAM43AQ8N2R8 423 aa20■□□□□ 0.79
SLIT3-201ENST00000332966 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
SLIT3-201ENST00000332966 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
SLIT3-201ENST00000332966 PANK3Q9H999 370 aa19.99■□□□□ 0.79
SLIT3-201ENST00000332966 E9PSI1 815 aa19.99■□□□□ 0.79
SLIT3-201ENST00000332966 MCCP23508 829 aa19.98■□□□□ 0.79
SLIT3-201ENST00000332966 IGF1RP08069 1367 aa19.98■□□□□ 0.79
SLIT3-201ENST00000332966 ZRSR1Q15695 479 aaKnown RBP19.98■□□□□ 0.79
SLIT3-201ENST00000332966 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
SLIT3-201ENST00000332966 SYAP1Q96A49 352 aaPredicted RBP19.97■□□□□ 0.79
SLIT3-201ENST00000332966 CHMP5Q9NZZ3 219 aa19.97■□□□□ 0.79
SLIT3-201ENST00000332966 CLUAP1Q96AJ1 413 aa19.96■□□□□ 0.79
SLIT3-201ENST00000332966 CUX1P39880 1505 aa19.94■□□□□ 0.78
SLIT3-201ENST00000332966 SMC4Q9NTJ3 1288 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
SLIT3-201ENST00000332966 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
SLIT3-201ENST00000332966 NGEFQ8N5V2 710 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 GOLGA6L6A8MZA4 724 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 FRAT2O75474 233 aaPredicted RBP19.93■□□□□ 0.78
SLIT3-201ENST00000332966 ARID3AQ99856 593 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
SLIT3-201ENST00000332966 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
SLIT3-201ENST00000332966 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
SLIT3-201ENST00000332966 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms