RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 KIF21BO75037 1637 aa20.37■□□□□ 0.85
SLIT3-201ENST00000332966 MSNP26038 577 aaKnown RBP20.36■□□□□ 0.85
SLIT3-201ENST00000332966 RRP1P56182 461 aaKnown RBP20.36■□□□□ 0.85
SLIT3-201ENST00000332966 PKD2Q13563 968 aa20.34■□□□□ 0.85
SLIT3-201ENST00000332966 EXOC6Q8TAG9 804 aa20.34■□□□□ 0.85
SLIT3-201ENST00000332966 PTMSP20962 102 aa20.32■□□□□ 0.84
SLIT3-201ENST00000332966 CASC1Q6TDU7 716 aa20.32■□□□□ 0.84
SLIT3-201ENST00000332966 SPRYD3Q8NCJ5 442 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 ARID4BQ4LE39 1312 aaPredicted RBP20.31■□□□□ 0.84
SLIT3-201ENST00000332966 FAM161AQ3B820 660 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
SLIT3-201ENST00000332966 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 CCDC18Q5T9S5 1454 aa20.31■□□□□ 0.84
SLIT3-201ENST00000332966 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
SLIT3-201ENST00000332966 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
SLIT3-201ENST00000332966 GBP4Q96PP9 640 aa20.29■□□□□ 0.84
SLIT3-201ENST00000332966 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
SLIT3-201ENST00000332966 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
SLIT3-201ENST00000332966 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.83
SLIT3-201ENST00000332966 CNTLNQ9NXG0 1405 aa20.26■□□□□ 0.83
SLIT3-201ENST00000332966 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
SLIT3-201ENST00000332966 MSH5O43196 834 aa20.25■□□□□ 0.83
SLIT3-201ENST00000332966 SLC4A3P48751 1232 aa20.25■□□□□ 0.83
SLIT3-201ENST00000332966 HSP90AA2PQ14568 343 aaPredicted RBP20.25■□□□□ 0.83
SLIT3-201ENST00000332966 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
SLIT3-201ENST00000332966 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
SLIT3-201ENST00000332966 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
SLIT3-201ENST00000332966 MAPK8IP3Q9UPT6 1336 aa20.23■□□□□ 0.83
SLIT3-201ENST00000332966 CCDC7Q96M83 1385 aa20.23■□□□□ 0.83
SLIT3-201ENST00000332966 PAK3O75914 559 aaPredicted RBP20.23■□□□□ 0.83
SLIT3-201ENST00000332966 ANO8Q9HCE9 1232 aaPredicted RBP20.21■□□□□ 0.83
SLIT3-201ENST00000332966 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
SLIT3-201ENST00000332966 WASHC2AQ641Q2 1341 aa20.19■□□□□ 0.82
SLIT3-201ENST00000332966 CRBNQ96SW2 442 aa20.19■□□□□ 0.82
SLIT3-201ENST00000332966 NFKBIBQ15653 356 aa20.18■□□□□ 0.82
SLIT3-201ENST00000332966 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
SLIT3-201ENST00000332966 PLIN1O60240 522 aa20.16■□□□□ 0.82
SLIT3-201ENST00000332966 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
SLIT3-201ENST00000332966 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
SLIT3-201ENST00000332966 STAG3Q9UJ98 1225 aa20.15■□□□□ 0.82
SLIT3-201ENST00000332966 NUP155O75694 1391 aa20.14■□□□□ 0.81
SLIT3-201ENST00000332966 KIF7Q2M1P5 1343 aa20.14■□□□□ 0.81
SLIT3-201ENST00000332966 USP47Q96K76 1375 aa20.14■□□□□ 0.81
SLIT3-201ENST00000332966 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
SLIT3-201ENST00000332966 ANKRD30AQ9BXX3 1397 aa20.13■□□□□ 0.81
SLIT3-201ENST00000332966 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
SLIT3-201ENST00000332966 PRKCSHP14314 528 aaPredicted RBP20.12■□□□□ 0.81
SLIT3-201ENST00000332966 LRRC9Q6ZRR7 1453 aa20.12■□□□□ 0.81
SLIT3-201ENST00000332966 CHAF1AQ13111 956 aaPredicted RBP20.12■□□□□ 0.81
SLIT3-201ENST00000332966 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
SLIT3-201ENST00000332966 MFAP1P55081 439 aaKnown RBP20.1■□□□□ 0.81
SLIT3-201ENST00000332966 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
SLIT3-201ENST00000332966 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
SLIT3-201ENST00000332966 CENPJQ9HC77 1338 aaPredicted RBP20.09■□□□□ 0.81
SLIT3-201ENST00000332966 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
SLIT3-201ENST00000332966 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.81
SLIT3-201ENST00000332966 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
SLIT3-201ENST00000332966 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
SLIT3-201ENST00000332966 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
SLIT3-201ENST00000332966 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
SLIT3-201ENST00000332966 BRPF3Q9ULD4 1205 aa20.06■□□□□ 0.8
SLIT3-201ENST00000332966 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
SLIT3-201ENST00000332966 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
SLIT3-201ENST00000332966 CDK11BP21127 795 aaKnown RBP20.04■□□□□ 0.8
SLIT3-201ENST00000332966 KIAA2012Q0VF49 1180 aa20.03■□□□□ 0.8
SLIT3-201ENST00000332966 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
SLIT3-201ENST00000332966 SMG6Q86US8 1419 aaKnown RBP20.03■□□□□ 0.8
SLIT3-201ENST00000332966 TPRNQ4KMQ1 711 aa20.02■□□□□ 0.8
SLIT3-201ENST00000332966 SKOR2Q2VWA4 1001 aaPredicted RBP20.02■□□□□ 0.8
SLIT3-201ENST00000332966 CALD1Q05682 793 aaKnown RBP20.01■□□□□ 0.79
SLIT3-201ENST00000332966 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
SLIT3-201ENST00000332966 AKNAQ7Z591 1439 aa20.01■□□□□ 0.79
SLIT3-201ENST00000332966 FAM43AQ8N2R8 423 aa20■□□□□ 0.79
SLIT3-201ENST00000332966 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
SLIT3-201ENST00000332966 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
SLIT3-201ENST00000332966 PANK3Q9H999 370 aa19.99■□□□□ 0.79
SLIT3-201ENST00000332966 E9PSI1 815 aa19.99■□□□□ 0.79
SLIT3-201ENST00000332966 MCCP23508 829 aa19.98■□□□□ 0.79
SLIT3-201ENST00000332966 IGF1RP08069 1367 aa19.98■□□□□ 0.79
SLIT3-201ENST00000332966 ZRSR1Q15695 479 aaKnown RBP19.98■□□□□ 0.79
SLIT3-201ENST00000332966 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
SLIT3-201ENST00000332966 SYAP1Q96A49 352 aaPredicted RBP19.97■□□□□ 0.79
SLIT3-201ENST00000332966 CHMP5Q9NZZ3 219 aa19.97■□□□□ 0.79
SLIT3-201ENST00000332966 CLUAP1Q96AJ1 413 aa19.96■□□□□ 0.79
SLIT3-201ENST00000332966 CUX1P39880 1505 aa19.94■□□□□ 0.78
SLIT3-201ENST00000332966 SMC4Q9NTJ3 1288 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
SLIT3-201ENST00000332966 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
SLIT3-201ENST00000332966 NGEFQ8N5V2 710 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 GOLGA6L6A8MZA4 724 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 FRAT2O75474 233 aaPredicted RBP19.93■□□□□ 0.78
SLIT3-201ENST00000332966 ARID3AQ99856 593 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
SLIT3-201ENST00000332966 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
SLIT3-201ENST00000332966 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
SLIT3-201ENST00000332966 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
SLIT3-201ENST00000332966 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms