RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 PLEKHD1A6NEE1 506 aa25.74■■□□□ 1.71
LYSMD4-201ENST00000332728 DAPK1P53355 1430 aa25.74■■□□□ 1.71
LYSMD4-201ENST00000332728 DENND4BO75064 1496 aaPredicted RBP25.74■■□□□ 1.71
LYSMD4-201ENST00000332728 TCOF1Q13428 1488 aaKnown RBP25.74■■□□□ 1.71
LYSMD4-201ENST00000332728 CARMIL2Q6F5E8 1435 aa25.73■■□□□ 1.71
LYSMD4-201ENST00000332728 MIA2Q96PC5 1412 aa25.71■■□□□ 1.71
LYSMD4-201ENST00000332728 KIF14Q15058 1648 aa25.7■■□□□ 1.7
LYSMD4-201ENST00000332728 TIMELESSQ9UNS1 1208 aa25.7■■□□□ 1.7
LYSMD4-201ENST00000332728 HNRNPMP52272 730 aaKnown RBP eCLIP25.69■■□□□ 1.7
LYSMD4-201ENST00000332728 HSPA5P11021 654 aaKnown RBP25.69■■□□□ 1.7
LYSMD4-201ENST00000332728 TROQ12816 1431 aaPredicted RBP25.68■■□□□ 1.7
LYSMD4-201ENST00000332728 POLR3GLQ9BT43 218 aa25.65■■□□□ 1.7
LYSMD4-201ENST00000332728 NUP160Q12769 1436 aa25.64■■□□□ 1.7
LYSMD4-201ENST00000332728 ANP32CO43423 234 aa25.64■■□□□ 1.69
LYSMD4-201ENST00000332728 CAMSAP2Q08AD1 1489 aa25.62■■□□□ 1.69
LYSMD4-201ENST00000332728 GPATCH8Q9UKJ3 1502 aaKnown RBP25.62■■□□□ 1.69
LYSMD4-201ENST00000332728 NBPF8Q3BBV2 869 aa25.61■■□□□ 1.69
LYSMD4-201ENST00000332728 PTPRGP23470 1445 aa25.59■■□□□ 1.69
LYSMD4-201ENST00000332728 BCANQ96GW7 911 aa25.59■■□□□ 1.69
LYSMD4-201ENST00000332728 ATP10BO94823 1461 aa25.58■■□□□ 1.69
LYSMD4-201ENST00000332728 PKD2Q13563 968 aa25.57■■□□□ 1.68
LYSMD4-201ENST00000332728 C11orf95C9JLR9 678 aaPredicted RBP25.56■■□□□ 1.68
LYSMD4-201ENST00000332728 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
LYSMD4-201ENST00000332728 KDM5BQ9UGL1 1544 aa25.55■■□□□ 1.68
LYSMD4-201ENST00000332728 WASHC2AQ641Q2 1341 aa25.53■■□□□ 1.68
LYSMD4-201ENST00000332728 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
LYSMD4-201ENST00000332728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.51■■□□□ 1.67
LYSMD4-201ENST00000332728 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
LYSMD4-201ENST00000332728 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
LYSMD4-201ENST00000332728 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
LYSMD4-201ENST00000332728 TSPY4P0CV99 314 aa25.5■■□□□ 1.67
LYSMD4-201ENST00000332728 TSPY10P0CW01 314 aa25.5■■□□□ 1.67
LYSMD4-201ENST00000332728 ANKRD30BQ9BXX2 1392 aa25.5■■□□□ 1.67
LYSMD4-201ENST00000332728 NCOA1Q15788 1441 aa25.49■■□□□ 1.67
LYSMD4-201ENST00000332728 SENP3-EIF4A1A0A087X0R7 540 aa25.47■■□□□ 1.67
LYSMD4-201ENST00000332728 ERCC6L2Q5T890 1561 aa25.47■■□□□ 1.67
LYSMD4-201ENST00000332728 ROCK1Q13464 1354 aa25.46■■□□□ 1.67
LYSMD4-201ENST00000332728 SUPT16HQ9Y5B9 1047 aaKnown RBP25.45■■□□□ 1.66
LYSMD4-201ENST00000332728 NUP155O75694 1391 aa25.45■■□□□ 1.66
LYSMD4-201ENST00000332728 ANKRD30AQ9BXX3 1397 aa25.42■■□□□ 1.66
LYSMD4-201ENST00000332728 CCDC184Q52MB2 194 aa25.41■■□□□ 1.66
LYSMD4-201ENST00000332728 CHD1O14646 1710 aa25.41■■□□□ 1.66
LYSMD4-201ENST00000332728 ABCA8O94911 1581 aa25.4■■□□□ 1.66
LYSMD4-201ENST00000332728 ANKRD50Q9ULJ7 1429 aa25.4■■□□□ 1.66
LYSMD4-201ENST00000332728 PZPP20742 1482 aa25.39■■□□□ 1.66
LYSMD4-201ENST00000332728 C9orf84Q5VXU9 1444 aa25.38■■□□□ 1.65
LYSMD4-201ENST00000332728 RGL3Q3MIN7 710 aa25.36■■□□□ 1.65
LYSMD4-201ENST00000332728 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
LYSMD4-201ENST00000332728 RPRD2Q5VT52 1461 aaKnown RBP25.34■■□□□ 1.65
LYSMD4-201ENST00000332728 FKBP8Q14318 412 aa25.33■■□□□ 1.65
LYSMD4-201ENST00000332728 CDC42BPAQ5VT25 1732 aa25.33■■□□□ 1.65
LYSMD4-201ENST00000332728 KIF15Q9NS87 1388 aa25.33■■□□□ 1.65
LYSMD4-201ENST00000332728 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
LYSMD4-201ENST00000332728 ITSN2Q9NZM3 1697 aa25.32■■□□□ 1.64
LYSMD4-201ENST00000332728 FAM9BQ8IZU0 186 aa25.3■■□□□ 1.64
LYSMD4-201ENST00000332728 DCAF11Q8TEB1 546 aa25.29■■□□□ 1.64
LYSMD4-201ENST00000332728 TEX14Q8IWB6 1497 aa25.27■■□□□ 1.64
LYSMD4-201ENST00000332728 IRX6P78412 446 aaPredicted RBP25.27■■□□□ 1.64
LYSMD4-201ENST00000332728 CCER2I3L3R5 266 aa25.26■■□□□ 1.63
LYSMD4-201ENST00000332728 KIAA1107Q9UPP5 1409 aa25.25■■□□□ 1.63
LYSMD4-201ENST00000332728 KIF7Q2M1P5 1343 aa25.25■■□□□ 1.63
LYSMD4-201ENST00000332728 MYT1LQ9UL68 1186 aa25.24■■□□□ 1.63
LYSMD4-201ENST00000332728 CCDC7Q96M83 1385 aa25.23■■□□□ 1.63
LYSMD4-201ENST00000332728 ADCY10Q96PN6 1610 aa25.23■■□□□ 1.63
LYSMD4-201ENST00000332728 ARHGAP5Q13017 1502 aa25.22■■□□□ 1.63
LYSMD4-201ENST00000332728 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
LYSMD4-201ENST00000332728 SYCP2Q9BX26 1530 aa25.18■■□□□ 1.62
LYSMD4-201ENST00000332728 ADGBQ8N7X0 1667 aa25.18■■□□□ 1.62
LYSMD4-201ENST00000332728 ADGRL2O95490 1459 aa25.17■■□□□ 1.62
LYSMD4-201ENST00000332728 MBD5Q9P267 1494 aa25.17■■□□□ 1.62
LYSMD4-201ENST00000332728 MRS2Q9HD23 443 aa25.17■■□□□ 1.62
LYSMD4-201ENST00000332728 TTC37Q6PGP7 1564 aa25.17■■□□□ 1.62
LYSMD4-201ENST00000332728 SAMD9LQ8IVG5 1584 aa25.16■■□□□ 1.62
LYSMD4-201ENST00000332728 CROCC2H7BZ55 1655 aa25.15■■□□□ 1.62
LYSMD4-201ENST00000332728 AFAP1Q8N556 730 aa25.15■■□□□ 1.62
LYSMD4-201ENST00000332728 USP47Q96K76 1375 aa25.15■■□□□ 1.62
LYSMD4-201ENST00000332728 PRKRIP1Q9H875 184 aaPredicted RBP25.13■■□□□ 1.61
LYSMD4-201ENST00000332728 CDC42BPBQ9Y5S2 1711 aa25.13■■□□□ 1.61
LYSMD4-201ENST00000332728 CNTLNQ9NXG0 1405 aa25.12■■□□□ 1.61
LYSMD4-201ENST00000332728 ST20-MTHFSA0A0A6YYL1 179 aa25.11■■□□□ 1.61
LYSMD4-201ENST00000332728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.11■■□□□ 1.61
LYSMD4-201ENST00000332728 CCDC141Q6ZP82 1450 aa25.1■■□□□ 1.61
LYSMD4-201ENST00000332728 NBPF1Q3BBV0 1214 aa25.08■■□□□ 1.61
LYSMD4-201ENST00000332728 PLEKHH2Q8IVE3 1493 aa25.08■■□□□ 1.61
LYSMD4-201ENST00000332728 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.6
LYSMD4-201ENST00000332728 NEFLP07196 543 aa25.06■■□□□ 1.6
LYSMD4-201ENST00000332728 SPATA31E1Q6ZUB1 1445 aa25.05■■□□□ 1.6
LYSMD4-201ENST00000332728 ARHGEF12Q9NZN5 1544 aa25.04■■□□□ 1.6
LYSMD4-201ENST00000332728 ABCC2Q92887 1545 aa25.03■■□□□ 1.6
LYSMD4-201ENST00000332728 EFCAB2Q5VUJ9 269 aa25.03■■□□□ 1.6
LYSMD4-201ENST00000332728 PREX2Q70Z35 1606 aa25■■□□□ 1.59
LYSMD4-201ENST00000332728 SHANK2Q9UPX8 1470 aa25■■□□□ 1.59
LYSMD4-201ENST00000332728 TRAPPC8Q9Y2L5 1435 aa25■■□□□ 1.59
LYSMD4-201ENST00000332728 ROCK2O75116 1388 aaKnown RBP24.98■■□□□ 1.59
LYSMD4-201ENST00000332728 FAM135AQ9P2D6 1515 aa24.98■■□□□ 1.59
LYSMD4-201ENST00000332728 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
LYSMD4-201ENST00000332728 BCORL1Q5H9F3 1711 aa24.96■■□□□ 1.59
LYSMD4-201ENST00000332728 CCDC144AA2RUR9 1427 aa24.96■■□□□ 1.59
LYSMD4-201ENST00000332728 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
LYSMD4-201ENST00000332728 RSPH4AQ5TD94 716 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms