RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 MSH5O43196 834 aa12.88□□□□□ -0.35
CSGALNACT1-201ENST00000332246 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
CSGALNACT1-201ENST00000332246 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
CSGALNACT1-201ENST00000332246 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
CSGALNACT1-201ENST00000332246 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
CSGALNACT1-201ENST00000332246 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
CSGALNACT1-201ENST00000332246 UPF2Q9HAU5 1272 aaKnown RBP12.86□□□□□ -0.35
CSGALNACT1-201ENST00000332246 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
CSGALNACT1-201ENST00000332246 KIF7Q2M1P5 1343 aa12.86□□□□□ -0.35
CSGALNACT1-201ENST00000332246 CFTRP13569 1480 aa12.86□□□□□ -0.35
CSGALNACT1-201ENST00000332246 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
CSGALNACT1-201ENST00000332246 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
CSGALNACT1-201ENST00000332246 ERCC6Q03468 1493 aa12.84□□□□□ -0.35
CSGALNACT1-201ENST00000332246 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
CSGALNACT1-201ENST00000332246 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
CSGALNACT1-201ENST00000332246 NUTM2DQ5VT03 806 aaPredicted RBP12.83□□□□□ -0.36
CSGALNACT1-201ENST00000332246 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
CSGALNACT1-201ENST00000332246 LRRC9Q6ZRR7 1453 aa12.83□□□□□ -0.36
CSGALNACT1-201ENST00000332246 IPO9Q96P70 1041 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-201ENST00000332246 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-201ENST00000332246 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
CSGALNACT1-201ENST00000332246 NESP48681 1621 aa12.81□□□□□ -0.36
CSGALNACT1-201ENST00000332246 BCL2L13Q9BXK5 485 aa12.81□□□□□ -0.36
CSGALNACT1-201ENST00000332246 CUX1P39880 1505 aa12.81□□□□□ -0.36
CSGALNACT1-201ENST00000332246 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
CSGALNACT1-201ENST00000332246 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT1-201ENST00000332246 AKNAQ7Z591 1439 aa12.8□□□□□ -0.36
CSGALNACT1-201ENST00000332246 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
CSGALNACT1-201ENST00000332246 TMF1P82094 1093 aa12.79□□□□□ -0.36
CSGALNACT1-201ENST00000332246 PANK3Q9H999 370 aa12.79□□□□□ -0.36
CSGALNACT1-201ENST00000332246 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
CSGALNACT1-201ENST00000332246 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
CSGALNACT1-201ENST00000332246 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
CSGALNACT1-201ENST00000332246 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-201ENST00000332246 ARID4BQ4LE39 1312 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-201ENST00000332246 PDE4AP27815 886 aa12.78□□□□□ -0.36
CSGALNACT1-201ENST00000332246 CCDC7Q96M83 1385 aa12.78□□□□□ -0.36
CSGALNACT1-201ENST00000332246 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
CSGALNACT1-201ENST00000332246 USP47Q96K76 1375 aa12.77□□□□□ -0.37
CSGALNACT1-201ENST00000332246 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
CSGALNACT1-201ENST00000332246 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
CSGALNACT1-201ENST00000332246 PEG3Q9GZU2 1588 aa12.76□□□□□ -0.37
CSGALNACT1-201ENST00000332246 KTN1Q86UP2 1357 aaKnown RBP12.75□□□□□ -0.37
CSGALNACT1-201ENST00000332246 STK26Q9P289 416 aa12.75□□□□□ -0.37
CSGALNACT1-201ENST00000332246 SOX12O15370 315 aa12.75□□□□□ -0.37
CSGALNACT1-201ENST00000332246 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
CSGALNACT1-201ENST00000332246 CC2D2AQ9P2K1 1620 aa12.74□□□□□ -0.37
CSGALNACT1-201ENST00000332246 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
CSGALNACT1-201ENST00000332246 FANCIQ9NVI1 1328 aa12.73□□□□□ -0.37
CSGALNACT1-201ENST00000332246 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
CSGALNACT1-201ENST00000332246 GGT6Q6P531 493 aa12.73□□□□□ -0.37
CSGALNACT1-201ENST00000332246 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
CSGALNACT1-201ENST00000332246 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
CSGALNACT1-201ENST00000332246 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
CSGALNACT1-201ENST00000332246 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
CSGALNACT1-201ENST00000332246 APBB1O00213 710 aa12.71□□□□□ -0.38
CSGALNACT1-201ENST00000332246 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.38
CSGALNACT1-201ENST00000332246 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.38
CSGALNACT1-201ENST00000332246 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSGALNACT1-201ENST00000332246 RALBP1Q15311 655 aa12.7□□□□□ -0.38
CSGALNACT1-201ENST00000332246 APAF1O14727 1248 aa12.7□□□□□ -0.38
CSGALNACT1-201ENST00000332246 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
CSGALNACT1-201ENST00000332246 GAPVD1Q14C86 1478 aa12.69□□□□□ -0.38
CSGALNACT1-201ENST00000332246 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
CSGALNACT1-201ENST00000332246 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSGALNACT1-201ENST00000332246 NCOA2Q15596 1464 aa12.69□□□□□ -0.38
CSGALNACT1-201ENST00000332246 ERICH3Q5RHP9 1530 aa12.68□□□□□ -0.38
CSGALNACT1-201ENST00000332246 ZBTB7CA1YPR0 619 aa12.68□□□□□ -0.38
CSGALNACT1-201ENST00000332246 BECN1Q14457 450 aa12.68□□□□□ -0.38
CSGALNACT1-201ENST00000332246 ANKRD30AQ9BXX3 1397 aa12.68□□□□□ -0.38
CSGALNACT1-201ENST00000332246 MYOM3Q5VTT5 1437 aa12.68□□□□□ -0.38
CSGALNACT1-201ENST00000332246 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
CSGALNACT1-201ENST00000332246 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
CSGALNACT1-201ENST00000332246 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-201ENST00000332246 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSGALNACT1-201ENST00000332246 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
CSGALNACT1-201ENST00000332246 GOLGA2Q08379 1002 aa12.67□□□□□ -0.38
CSGALNACT1-201ENST00000332246 CNTLNQ9NXG0 1405 aa12.67□□□□□ -0.38
CSGALNACT1-201ENST00000332246 TRAK1Q9UPV9 953 aa12.67□□□□□ -0.38
CSGALNACT1-201ENST00000332246 KIF3BO15066 747 aa12.66□□□□□ -0.38
CSGALNACT1-201ENST00000332246 ADAMTS8Q9UP79 889 aa12.65□□□□□ -0.38
CSGALNACT1-201ENST00000332246 CDCA8Q53HL2 280 aa12.65□□□□□ -0.38
CSGALNACT1-201ENST00000332246 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT1-201ENST00000332246 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT1-201ENST00000332246 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
CSGALNACT1-201ENST00000332246 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT1-201ENST00000332246 MLECQ14165 292 aa12.64□□□□□ -0.39
CSGALNACT1-201ENST00000332246 TOPBP1Q92547 1522 aa12.63□□□□□ -0.39
CSGALNACT1-201ENST00000332246 PNISRQ8TF01 805 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT1-201ENST00000332246 MFAP1P55081 439 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT1-201ENST00000332246 NAP1L5Q96NT1 182 aaPredicted RBP12.63□□□□□ -0.39
CSGALNACT1-201ENST00000332246 KIF15Q9NS87 1388 aa12.62□□□□□ -0.39
CSGALNACT1-201ENST00000332246 POGKQ9P215 609 aa12.62□□□□□ -0.39
CSGALNACT1-201ENST00000332246 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
CSGALNACT1-201ENST00000332246 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
CSGALNACT1-201ENST00000332246 NAIPQ13075 1403 aa12.61□□□□□ -0.39
CSGALNACT1-201ENST00000332246 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
CSGALNACT1-201ENST00000332246 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
CSGALNACT1-201ENST00000332246 C14orf37Q86TY3 774 aa12.6□□□□□ -0.39
CSGALNACT1-201ENST00000332246 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms