RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
SYNGR1-203ENST00000328933 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
SYNGR1-203ENST00000328933 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
SYNGR1-203ENST00000328933 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
SYNGR1-203ENST00000328933 DAXXQ9UER7 740 aaPredicted RBP19.4■□□□□ 0.7
SYNGR1-203ENST00000328933 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
SYNGR1-203ENST00000328933 TNNT2P45379 298 aaPredicted RBP19.39■□□□□ 0.69
SYNGR1-203ENST00000328933 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
SYNGR1-203ENST00000328933 MRS2Q9HD23 443 aa19.38■□□□□ 0.69
SYNGR1-203ENST00000328933 RAPGEF3O95398 923 aa19.37■□□□□ 0.69
SYNGR1-203ENST00000328933 NUTM2FA1L443 756 aa19.36■□□□□ 0.69
SYNGR1-203ENST00000328933 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
SYNGR1-203ENST00000328933 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
SYNGR1-203ENST00000328933 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.69
SYNGR1-203ENST00000328933 ABCA10Q8WWZ4 1543 aa19.33■□□□□ 0.69
SYNGR1-203ENST00000328933 ARXQ96QS3 562 aa19.33■□□□□ 0.69
SYNGR1-203ENST00000328933 KIAA0586Q9BVV6 1533 aa19.31■□□□□ 0.68
SYNGR1-203ENST00000328933 TMF1P82094 1093 aa19.31■□□□□ 0.68
SYNGR1-203ENST00000328933 PEG3Q9GZU2 1588 aa19.31■□□□□ 0.68
SYNGR1-203ENST00000328933 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
SYNGR1-203ENST00000328933 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
SYNGR1-203ENST00000328933 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
SYNGR1-203ENST00000328933 CCDC9Q9Y3X0 531 aaKnown RBP19.24■□□□□ 0.67
SYNGR1-203ENST00000328933 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
SYNGR1-203ENST00000328933 NGDNQ8NEJ9 315 aaKnown RBP19.23■□□□□ 0.67
SYNGR1-203ENST00000328933 MYOM3Q5VTT5 1437 aa19.23■□□□□ 0.67
SYNGR1-203ENST00000328933 ARHGAP5Q13017 1502 aa19.23■□□□□ 0.67
SYNGR1-203ENST00000328933 SENP3-EIF4A1A0A087X0R7 540 aa19.23■□□□□ 0.67
SYNGR1-203ENST00000328933 TRAK1Q9UPV9 953 aa19.23■□□□□ 0.67
SYNGR1-203ENST00000328933 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
SYNGR1-203ENST00000328933 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
SYNGR1-203ENST00000328933 KIF15Q9NS87 1388 aa19.22■□□□□ 0.67
SYNGR1-203ENST00000328933 U2SURPO15042 1029 aaKnown RBP19.21■□□□□ 0.67
SYNGR1-203ENST00000328933 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
SYNGR1-203ENST00000328933 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
SYNGR1-203ENST00000328933 NEUROD2Q15784 382 aa19.21■□□□□ 0.66
SYNGR1-203ENST00000328933 NUDCQ9Y266 331 aa19.21■□□□□ 0.66
SYNGR1-203ENST00000328933 CSB-PGBD3P0DP91 1061 aa19.2■□□□□ 0.66
SYNGR1-203ENST00000328933 SCAPERQ9BY12 1400 aa19.2■□□□□ 0.66
SYNGR1-203ENST00000328933 CASKIN1Q8WXD9 1431 aa19.19■□□□□ 0.66
SYNGR1-203ENST00000328933 L3MBTL2Q969R5 705 aa19.17■□□□□ 0.66
SYNGR1-203ENST00000328933 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
SYNGR1-203ENST00000328933 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
SYNGR1-203ENST00000328933 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
SYNGR1-203ENST00000328933 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
SYNGR1-203ENST00000328933 TIMELESSQ9UNS1 1208 aa19.14■□□□□ 0.65
SYNGR1-203ENST00000328933 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
SYNGR1-203ENST00000328933 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
SYNGR1-203ENST00000328933 MORC1Q86VD1 984 aa19.12■□□□□ 0.65
SYNGR1-203ENST00000328933 TROQ12816 1431 aaPredicted RBP19.11■□□□□ 0.65
SYNGR1-203ENST00000328933 LAS1LQ9Y4W2 734 aaKnown RBP19.11■□□□□ 0.65
SYNGR1-203ENST00000328933 FGD6Q6ZV73 1430 aa19.1■□□□□ 0.65
SYNGR1-203ENST00000328933 KIF21BO75037 1637 aa19.1■□□□□ 0.65
SYNGR1-203ENST00000328933 NCOA2Q15596 1464 aa19.1■□□□□ 0.65
SYNGR1-203ENST00000328933 PLB1Q6P1J6 1458 aa19.1■□□□□ 0.65
SYNGR1-203ENST00000328933 IQGAP2Q13576 1575 aa19.09■□□□□ 0.65
SYNGR1-203ENST00000328933 PHLDB1Q86UU1 1377 aa19.09■□□□□ 0.65
SYNGR1-203ENST00000328933 NPHP1O15259 732 aa19.09■□□□□ 0.65
SYNGR1-203ENST00000328933 TXNDC2Q86VQ3 553 aa19.09■□□□□ 0.65
SYNGR1-203ENST00000328933 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.07■□□□□ 0.64
SYNGR1-203ENST00000328933 HSPA5P11021 654 aaKnown RBP19.07■□□□□ 0.64
SYNGR1-203ENST00000328933 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
SYNGR1-203ENST00000328933 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
SYNGR1-203ENST00000328933 TERF2IPQ9NYB0 399 aa19.05■□□□□ 0.64
SYNGR1-203ENST00000328933 MINK1Q8N4C8 1332 aaPredicted RBP19.05■□□□□ 0.64
SYNGR1-203ENST00000328933 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
SYNGR1-203ENST00000328933 EFCAB5A4FU69 1503 aa19.04■□□□□ 0.64
SYNGR1-203ENST00000328933 THEMISQ8N1K5 641 aaPredicted RBP19.04■□□□□ 0.64
SYNGR1-203ENST00000328933 FYCO1Q9BQS8 1478 aa19.02■□□□□ 0.64
SYNGR1-203ENST00000328933 ATF3P18847 181 aa19.02■□□□□ 0.64
SYNGR1-203ENST00000328933 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.02■□□□□ 0.64
SYNGR1-203ENST00000328933 EIF3AQ14152 1382 aaKnown RBP19.02■□□□□ 0.64
SYNGR1-203ENST00000328933 GOLGA6L2Q8N9W4 650 aaPredicted RBP19■□□□□ 0.63
SYNGR1-203ENST00000328933 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
SYNGR1-203ENST00000328933 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
SYNGR1-203ENST00000328933 MIER1Q8N108 512 aa18.98■□□□□ 0.63
SYNGR1-203ENST00000328933 CDK13Q14004 1512 aaKnown RBP18.98■□□□□ 0.63
SYNGR1-203ENST00000328933 AMPHP49418 695 aa18.96■□□□□ 0.63
SYNGR1-203ENST00000328933 PLEKHH2Q8IVE3 1493 aa18.95■□□□□ 0.62
SYNGR1-203ENST00000328933 PSME1Q06323 249 aa18.94■□□□□ 0.62
SYNGR1-203ENST00000328933 ANKLE2Q86XL3 938 aa18.94■□□□□ 0.62
SYNGR1-203ENST00000328933 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
SYNGR1-203ENST00000328933 SLC26A8Q96RN1 970 aa18.93■□□□□ 0.62
SYNGR1-203ENST00000328933 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
SYNGR1-203ENST00000328933 EPRSP07814 1512 aaKnown RBP18.93■□□□□ 0.62
SYNGR1-203ENST00000328933 CEBPAP49715 358 aaPredicted RBP18.93■□□□□ 0.62
SYNGR1-203ENST00000328933 CUL7Q14999 1698 aa18.93■□□□□ 0.62
SYNGR1-203ENST00000328933 ST20-MTHFSA0A0A6YYL1 179 aa18.93■□□□□ 0.62
SYNGR1-203ENST00000328933 TMEM132EQ6IEE7 984 aa18.93■□□□□ 0.62
SYNGR1-203ENST00000328933 PNNQ9H307 717 aaKnown RBP18.92■□□□□ 0.62
SYNGR1-203ENST00000328933 RTF1Q92541 710 aaKnown RBP18.92■□□□□ 0.62
SYNGR1-203ENST00000328933 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
SYNGR1-203ENST00000328933 EVA1CP58658 441 aa18.91■□□□□ 0.62
SYNGR1-203ENST00000328933 U2AF1L5P0DN76 240 aaPredicted RBP18.9■□□□□ 0.62
SYNGR1-203ENST00000328933 U2AF1Q01081 240 aaKnown RBP eCLIP18.9■□□□□ 0.62
SYNGR1-203ENST00000328933 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
SYNGR1-203ENST00000328933 HECW1Q76N89 1606 aa18.89■□□□□ 0.62
SYNGR1-203ENST00000328933 SLC52A1Q9NWF4 448 aa18.88■□□□□ 0.61
SYNGR1-203ENST00000328933 EVC2Q86UK5 1308 aa18.88■□□□□ 0.61
SYNGR1-203ENST00000328933 MYH16Q9H6N6 1097 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms