RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
SYNM-201ENST00000328642 WDR43Q15061 677 aaKnown RBP eCLIP21.55■■□□□ 1.04
SYNM-201ENST00000328642 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
SYNM-201ENST00000328642 PRG4Q92954 1404 aaPredicted RBP21.54■■□□□ 1.04
SYNM-201ENST00000328642 ST20-MTHFSA0A0A6YYL1 179 aa21.53■■□□□ 1.04
SYNM-201ENST00000328642 ARID4BQ4LE39 1312 aaPredicted RBP21.53■■□□□ 1.04
SYNM-201ENST00000328642 ABCA10Q8WWZ4 1543 aa21.52■■□□□ 1.03
SYNM-201ENST00000328642 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
SYNM-201ENST00000328642 B4GALNT3Q6L9W6 998 aa21.51■■□□□ 1.03
SYNM-201ENST00000328642 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
SYNM-201ENST00000328642 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
SYNM-201ENST00000328642 KNSTRNQ9Y448 316 aa21.5■■□□□ 1.03
SYNM-201ENST00000328642 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
SYNM-201ENST00000328642 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
SYNM-201ENST00000328642 STK26Q9P289 416 aa21.48■■□□□ 1.03
SYNM-201ENST00000328642 PPM1GO15355 546 aaPredicted RBP21.48■■□□□ 1.03
SYNM-201ENST00000328642 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
SYNM-201ENST00000328642 SPAG9O60271 1321 aaKnown RBP21.46■■□□□ 1.03
SYNM-201ENST00000328642 ROCK2O75116 1388 aaKnown RBP21.44■■□□□ 1.02
SYNM-201ENST00000328642 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
SYNM-201ENST00000328642 PCF11O94913 1555 aaKnown RBP21.43■■□□□ 1.02
SYNM-201ENST00000328642 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
SYNM-201ENST00000328642 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
SYNM-201ENST00000328642 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
SYNM-201ENST00000328642 UACAQ9BZF9 1416 aa21.38■■□□□ 1.01
SYNM-201ENST00000328642 TMF1P82094 1093 aa21.37■■□□□ 1.01
SYNM-201ENST00000328642 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
SYNM-201ENST00000328642 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
SYNM-201ENST00000328642 NEFMP07197 916 aa21.35■■□□□ 1.01
SYNM-201ENST00000328642 KIF15Q9NS87 1388 aa21.33■■□□□ 1.01
SYNM-201ENST00000328642 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
SYNM-201ENST00000328642 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
SYNM-201ENST00000328642 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
SYNM-201ENST00000328642 POGKQ9P215 609 aa21.32■■□□□ 1
SYNM-201ENST00000328642 SOX12O15370 315 aa21.32■■□□□ 1
SYNM-201ENST00000328642 CCDC184Q52MB2 194 aa21.31■■□□□ 1
SYNM-201ENST00000328642 WDR97A6NE52 1622 aa21.31■■□□□ 1
SYNM-201ENST00000328642 TRAK1Q9UPV9 953 aa21.3■■□□□ 1
SYNM-201ENST00000328642 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
SYNM-201ENST00000328642 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
SYNM-201ENST00000328642 NAIPQ13075 1403 aa21.29■■□□□ 1
SYNM-201ENST00000328642 ANKRD50Q9ULJ7 1429 aa21.29■■□□□ 1
SYNM-201ENST00000328642 NBPF1Q3BBV0 1214 aa21.29■■□□□ 1
SYNM-201ENST00000328642 OSCARQ8IYS5 282 aa21.29■■□□□ 1
SYNM-201ENST00000328642 ZBTB7CA1YPR0 619 aa21.28■■□□□ 1
SYNM-201ENST00000328642 USP47Q96K76 1375 aa21.28■■□□□ 1
SYNM-201ENST00000328642 KIF7Q2M1P5 1343 aa21.27■□□□□ 0.99
SYNM-201ENST00000328642 WASHC2CQ9Y4E1 1318 aa21.27■□□□□ 0.99
SYNM-201ENST00000328642 EFCAB5A4FU69 1503 aa21.26■□□□□ 0.99
SYNM-201ENST00000328642 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
SYNM-201ENST00000328642 KANK1Q14678 1352 aa21.26■□□□□ 0.99
SYNM-201ENST00000328642 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
SYNM-201ENST00000328642 C14orf37Q86TY3 774 aa21.25■□□□□ 0.99
SYNM-201ENST00000328642 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
SYNM-201ENST00000328642 PANK3Q9H999 370 aa21.24■□□□□ 0.99
SYNM-201ENST00000328642 CCDC144AA2RUR9 1427 aa21.24■□□□□ 0.99
SYNM-201ENST00000328642 U2SURPO15042 1029 aaKnown RBP21.23■□□□□ 0.99
SYNM-201ENST00000328642 RTL5Q5HYW3 569 aaPredicted RBP21.23■□□□□ 0.99
SYNM-201ENST00000328642 RSPH4AQ5TD94 716 aa21.23■□□□□ 0.99
SYNM-201ENST00000328642 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
SYNM-201ENST00000328642 NUTM2FA1L443 756 aa21.22■□□□□ 0.99
SYNM-201ENST00000328642 NBR1Q14596 966 aa21.22■□□□□ 0.99
SYNM-201ENST00000328642 CCDC146Q8IYE0 955 aa21.21■□□□□ 0.99
SYNM-201ENST00000328642 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
SYNM-201ENST00000328642 ANP32AP39687 249 aaKnown RBP21.21■□□□□ 0.99
SYNM-201ENST00000328642 KIAA0586Q9BVV6 1533 aa21.21■□□□□ 0.99
SYNM-201ENST00000328642 FRAT1Q92837 279 aaPredicted RBP21.2■□□□□ 0.98
SYNM-201ENST00000328642 IQGAP2Q13576 1575 aa21.19■□□□□ 0.98
SYNM-201ENST00000328642 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
SYNM-201ENST00000328642 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
SYNM-201ENST00000328642 ARHGEF11O15085 1522 aa21.16■□□□□ 0.98
SYNM-201ENST00000328642 PPP4R2Q9NY27 417 aa21.15■□□□□ 0.98
SYNM-201ENST00000328642 GRIN2AQ12879 1464 aa21.15■□□□□ 0.98
SYNM-201ENST00000328642 CCDC7Q96M83 1385 aa21.14■□□□□ 0.97
SYNM-201ENST00000328642 TMEM132EQ6IEE7 984 aa21.14■□□□□ 0.97
SYNM-201ENST00000328642 MORC1Q86VD1 984 aa21.14■□□□□ 0.97
SYNM-201ENST00000328642 KTN1Q86UP2 1357 aaKnown RBP21.13■□□□□ 0.97
SYNM-201ENST00000328642 DAPK1P53355 1430 aa21.13■□□□□ 0.97
SYNM-201ENST00000328642 EHBP1L1Q8N3D4 1523 aa21.12■□□□□ 0.97
SYNM-201ENST00000328642 RGS3P49796 1198 aa21.12■□□□□ 0.97
SYNM-201ENST00000328642 RAPGEF3O95398 923 aa21.11■□□□□ 0.97
SYNM-201ENST00000328642 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
SYNM-201ENST00000328642 PLIN1O60240 522 aa21.09■□□□□ 0.97
SYNM-201ENST00000328642 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
SYNM-201ENST00000328642 C9orf84Q5VXU9 1444 aa21.09■□□□□ 0.97
SYNM-201ENST00000328642 TSHZ2Q9NRE2 1034 aa21.09■□□□□ 0.97
SYNM-201ENST00000328642 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
SYNM-201ENST00000328642 CFAP70Q5T0N1 1121 aa21.08■□□□□ 0.97
SYNM-201ENST00000328642 RRP7AQ9Y3A4 280 aaKnown RBP21.08■□□□□ 0.97
SYNM-201ENST00000328642 ABCC5O15440 1437 aa21.08■□□□□ 0.97
SYNM-201ENST00000328642 CUL7Q14999 1698 aa21.07■□□□□ 0.96
SYNM-201ENST00000328642 FAM69CQ0P6D2 419 aa21.07■□□□□ 0.96
SYNM-201ENST00000328642 LMOD2Q6P5Q4 547 aa21.07■□□□□ 0.96
SYNM-201ENST00000328642 ZBTB47Q9UFB7 747 aaPredicted RBP21.07■□□□□ 0.96
SYNM-201ENST00000328642 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
SYNM-201ENST00000328642 MIA2Q96PC5 1412 aa21.06■□□□□ 0.96
SYNM-201ENST00000328642 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
SYNM-201ENST00000328642 RBM19Q9Y4C8 960 aaKnown RBP21.05■□□□□ 0.96
SYNM-201ENST00000328642 SUPT6HQ7KZ85 1726 aaKnown RBP21.05■□□□□ 0.96
SYNM-201ENST00000328642 NLRP13Q86W25 1043 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms