RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
COL4A5-201ENST00000328300 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
COL4A5-201ENST00000328300 STAC3Q96MF2 364 aa14.9□□□□□ -0.02
COL4A5-201ENST00000328300 ANP32BQ92688 251 aaKnown RBP14.89□□□□□ -0.03
COL4A5-201ENST00000328300 RALBP1Q15311 655 aa14.89□□□□□ -0.03
COL4A5-201ENST00000328300 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
COL4A5-201ENST00000328300 KIF3BO15066 747 aa14.89□□□□□ -0.03
COL4A5-201ENST00000328300 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
COL4A5-201ENST00000328300 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
COL4A5-201ENST00000328300 HSPA5P11021 654 aaKnown RBP14.87□□□□□ -0.03
COL4A5-201ENST00000328300 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
COL4A5-201ENST00000328300 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL4A5-201ENST00000328300 GLIPR1L2Q4G1C9 344 aa14.86□□□□□ -0.03
COL4A5-201ENST00000328300 ZBTB7CA1YPR0 619 aa14.86□□□□□ -0.03
COL4A5-201ENST00000328300 CHMP4AQ9BY43 222 aa14.86□□□□□ -0.03
COL4A5-201ENST00000328300 SRPK2P78362 688 aaKnown RBP14.86□□□□□ -0.03
COL4A5-201ENST00000328300 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
COL4A5-201ENST00000328300 EID1Q9Y6B2 187 aa14.85□□□□□ -0.03
COL4A5-201ENST00000328300 WASHC2CQ9Y4E1 1318 aa14.85□□□□□ -0.03
COL4A5-201ENST00000328300 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
COL4A5-201ENST00000328300 CCDC144AA2RUR9 1427 aa14.84□□□□□ -0.03
COL4A5-201ENST00000328300 MLECQ14165 292 aa14.84□□□□□ -0.03
COL4A5-201ENST00000328300 CALD1Q05682 793 aaKnown RBP14.84□□□□□ -0.03
COL4A5-201ENST00000328300 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.03
COL4A5-201ENST00000328300 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL4A5-201ENST00000328300 FTSJ3Q8IY81 847 aaKnown RBP14.83□□□□□ -0.04
COL4A5-201ENST00000328300 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
COL4A5-201ENST00000328300 BICRAQ9NZM4 1560 aa14.83□□□□□ -0.04
COL4A5-201ENST00000328300 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
COL4A5-201ENST00000328300 CASC1Q6TDU7 716 aa14.82□□□□□ -0.04
COL4A5-201ENST00000328300 FGD6Q6ZV73 1430 aa14.82□□□□□ -0.04
COL4A5-201ENST00000328300 BECN1Q14457 450 aa14.81□□□□□ -0.04
COL4A5-201ENST00000328300 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
COL4A5-201ENST00000328300 PLEKHH2Q8IVE3 1493 aa14.81□□□□□ -0.04
COL4A5-201ENST00000328300 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
COL4A5-201ENST00000328300 PRXQ9BXM0 1461 aa14.8□□□□□ -0.04
COL4A5-201ENST00000328300 TERF2IPQ9NYB0 399 aa14.8□□□□□ -0.04
COL4A5-201ENST00000328300 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
COL4A5-201ENST00000328300 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
COL4A5-201ENST00000328300 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
COL4A5-201ENST00000328300 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
COL4A5-201ENST00000328300 ERICH6BQ5W0A0 696 aa14.78□□□□□ -0.04
COL4A5-201ENST00000328300 EHBP1L1Q8N3D4 1523 aa14.77□□□□□ -0.05
COL4A5-201ENST00000328300 ANP32EQ9BTT0 268 aa14.77□□□□□ -0.05
COL4A5-201ENST00000328300 PPP4R2Q9NY27 417 aa14.76□□□□□ -0.05
COL4A5-201ENST00000328300 VGFO15240 615 aaPredicted RBP14.76□□□□□ -0.05
COL4A5-201ENST00000328300 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
COL4A5-201ENST00000328300 DHX57Q6P158 1386 aaKnown RBP14.75□□□□□ -0.05
COL4A5-201ENST00000328300 U2SURPO15042 1029 aaKnown RBP14.75□□□□□ -0.05
COL4A5-201ENST00000328300 L3MBTL2Q969R5 705 aa14.75□□□□□ -0.05
COL4A5-201ENST00000328300 HECW1Q76N89 1606 aa14.75□□□□□ -0.05
COL4A5-201ENST00000328300 NBR1Q14596 966 aa14.74□□□□□ -0.05
COL4A5-201ENST00000328300 MIA2Q96PC5 1412 aa14.74□□□□□ -0.05
COL4A5-201ENST00000328300 LMOD2Q6P5Q4 547 aa14.73□□□□□ -0.05
COL4A5-201ENST00000328300 NCOA2Q15596 1464 aa14.73□□□□□ -0.05
COL4A5-201ENST00000328300 CUL7Q14999 1698 aa14.73□□□□□ -0.05
COL4A5-201ENST00000328300 PRG4Q92954 1404 aaPredicted RBP14.72□□□□□ -0.05
COL4A5-201ENST00000328300 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
COL4A5-201ENST00000328300 NESP48681 1621 aa14.71□□□□□ -0.05
COL4A5-201ENST00000328300 A0A0G2JS52 829 aa14.71□□□□□ -0.05
COL4A5-201ENST00000328300 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
COL4A5-201ENST00000328300 RTF1Q92541 710 aaKnown RBP14.7□□□□□ -0.06
COL4A5-201ENST00000328300 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
COL4A5-201ENST00000328300 KIAA0586Q9BVV6 1533 aa14.7□□□□□ -0.06
COL4A5-201ENST00000328300 IPO8O15397 1037 aaKnown RBP14.7□□□□□ -0.06
COL4A5-201ENST00000328300 FOXD1Q16676 465 aa14.7□□□□□ -0.06
COL4A5-201ENST00000328300 KIF15Q9NS87 1388 aa14.69□□□□□ -0.06
COL4A5-201ENST00000328300 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
COL4A5-201ENST00000328300 STK26Q9P289 416 aa14.68□□□□□ -0.06
COL4A5-201ENST00000328300 PDE3BQ13370 1112 aa14.68□□□□□ -0.06
COL4A5-201ENST00000328300 LMOD3Q0VAK6 560 aa14.67□□□□□ -0.06
COL4A5-201ENST00000328300 NEUROD2Q15784 382 aa14.67□□□□□ -0.06
COL4A5-201ENST00000328300 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
COL4A5-201ENST00000328300 NLRP13Q86W25 1043 aa14.67□□□□□ -0.06
COL4A5-201ENST00000328300 RRBP1Q9P2E9 1410 aaKnown RBP14.67□□□□□ -0.06
COL4A5-201ENST00000328300 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
COL4A5-201ENST00000328300 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
COL4A5-201ENST00000328300 HDAC5Q9UQL6 1122 aa14.66□□□□□ -0.06
COL4A5-201ENST00000328300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.66□□□□□ -0.066e-6■■■□□ 18.9
COL4A5-201ENST00000328300 SUPT16HQ9Y5B9 1047 aaKnown RBP14.66□□□□□ -0.06
COL4A5-201ENST00000328300 ANKRD50Q9ULJ7 1429 aa14.66□□□□□ -0.06
COL4A5-201ENST00000328300 ARHGAP5Q13017 1502 aa14.65□□□□□ -0.06
COL4A5-201ENST00000328300 TROQ12816 1431 aaPredicted RBP14.65□□□□□ -0.06
COL4A5-201ENST00000328300 MAGI1Q96QZ7 1491 aaPredicted RBP14.65□□□□□ -0.06
COL4A5-201ENST00000328300 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
COL4A5-201ENST00000328300 CYB5RLQ6IPT4 315 aa14.65□□□□□ -0.06
COL4A5-201ENST00000328300 EVC2Q86UK5 1308 aa14.64□□□□□ -0.07
COL4A5-201ENST00000328300 NGEFQ8N5V2 710 aa14.64□□□□□ -0.07
COL4A5-201ENST00000328300 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
COL4A5-201ENST00000328300 SAFB2Q14151 953 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL4A5-201ENST00000328300 HFM1A2PYH4 1435 aa14.62□□□□□ -0.07
COL4A5-201ENST00000328300 IRX6P78412 446 aaPredicted RBP14.61□□□□□ -0.07
COL4A5-201ENST00000328300 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
COL4A5-201ENST00000328300 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
COL4A5-201ENST00000328300 MYBBP1AQ9BQG0 1328 aaKnown RBP14.6□□□□□ -0.07
COL4A5-201ENST00000328300 IQGAP2Q13576 1575 aa14.6□□□□□ -0.07
COL4A5-201ENST00000328300 FAM69CQ0P6D2 419 aa14.59□□□□□ -0.07
COL4A5-201ENST00000328300 U2AF1L5P0DN76 240 aaPredicted RBP14.59□□□□□ -0.07
COL4A5-201ENST00000328300 U2AF1Q01081 240 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL4A5-201ENST00000328300 TIAM1Q13009 1591 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms