RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 ITGAEP38570 1179 aa10.47□□□□□ -0.73
CLRN1-202ENST00000327047 ADAMTS12P58397 1594 aa10.47□□□□□ -0.73
CLRN1-202ENST00000327047 ARHGAP35Q9NRY4 1499 aa10.46□□□□□ -0.73
CLRN1-202ENST00000327047 DHX57Q6P158 1386 aaKnown RBP10.46□□□□□ -0.73
CLRN1-202ENST00000327047 ABCA10Q8WWZ4 1543 aa10.46□□□□□ -0.73
CLRN1-202ENST00000327047 MSH5O43196 834 aa10.45□□□□□ -0.74
CLRN1-202ENST00000327047 PLB1Q6P1J6 1458 aa10.45□□□□□ -0.74
CLRN1-202ENST00000327047 NEFLP07196 543 aa10.43□□□□□ -0.74
CLRN1-202ENST00000327047 KANK4Q5T7N3 995 aaPredicted RBP10.43□□□□□ -0.74
CLRN1-202ENST00000327047 COL17A1Q9UMD9 1497 aaPredicted RBP10.41□□□□□ -0.74
CLRN1-202ENST00000327047 PRG4Q92954 1404 aaPredicted RBP10.39□□□□□ -0.75
CLRN1-202ENST00000327047 HOMEZQ8IX15 550 aa10.39□□□□□ -0.75
CLRN1-202ENST00000327047 BCORL1Q5H9F3 1711 aa10.39□□□□□ -0.75
CLRN1-202ENST00000327047 MED1Q15648 1581 aaPredicted RBP10.39□□□□□ -0.75
CLRN1-202ENST00000327047 ERICH6Q7L0X2 663 aa10.38□□□□□ -0.75
CLRN1-202ENST00000327047 TRIM52Q96A61 297 aa10.37□□□□□ -0.75
CLRN1-202ENST00000327047 DDX10Q13206 875 aaKnown RBP10.37□□□□□ -0.75
CLRN1-202ENST00000327047 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
CLRN1-202ENST00000327047 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
CLRN1-202ENST00000327047 FHAD1B1AJZ9 1412 aa10.32□□□□□ -0.76
CLRN1-202ENST00000327047 RRBP1Q9P2E9 1410 aaKnown RBP10.32□□□□□ -0.76
CLRN1-202ENST00000327047 MADDQ8WXG6 1647 aa10.32□□□□□ -0.76
CLRN1-202ENST00000327047 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
CLRN1-202ENST00000327047 CUL7Q14999 1698 aa10.31□□□□□ -0.76
CLRN1-202ENST00000327047 MAP3K1Q13233 1512 aa10.31□□□□□ -0.76
CLRN1-202ENST00000327047 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
CLRN1-202ENST00000327047 PODXL2Q9NZ53 605 aa10.31□□□□□ -0.76
CLRN1-202ENST00000327047 DMRT2Q9Y5R5 561 aa10.3□□□□□ -0.76
CLRN1-202ENST00000327047 UHRF1BP1LA0JNW5 1464 aa10.3□□□□□ -0.76
CLRN1-202ENST00000327047 FANCIQ9NVI1 1328 aa10.3□□□□□ -0.76
CLRN1-202ENST00000327047 MAGI3Q5TCQ9 1506 aa10.3□□□□□ -0.76
CLRN1-202ENST00000327047 EPRSP07814 1512 aaKnown RBP10.29□□□□□ -0.76
CLRN1-202ENST00000327047 P3H3Q8IVL6 736 aa10.29□□□□□ -0.76
CLRN1-202ENST00000327047 PREX1Q8TCU6 1659 aa10.29□□□□□ -0.76
CLRN1-202ENST00000327047 PTPRTO14522 1441 aa10.28□□□□□ -0.76
CLRN1-202ENST00000327047 ASXL2Q76L83 1435 aa10.28□□□□□ -0.76
CLRN1-202ENST00000327047 DEKP35659 375 aaKnown RBP10.28□□□□□ -0.76
CLRN1-202ENST00000327047 IRX6P78412 446 aaPredicted RBP10.28□□□□□ -0.76
CLRN1-202ENST00000327047 HIRIP3Q9BW71 556 aaPredicted RBP10.28□□□□□ -0.76
CLRN1-202ENST00000327047 CDK11AQ9UQ88 783 aaPredicted RBP10.28□□□□□ -0.76
CLRN1-202ENST00000327047 TIAM1Q13009 1591 aa10.28□□□□□ -0.76
CLRN1-202ENST00000327047 RIMS1Q86UR5 1692 aaKnown RBP10.27□□□□□ -0.76
CLRN1-202ENST00000327047 FHOD3Q2V2M9 1422 aa10.27□□□□□ -0.77
CLRN1-202ENST00000327047 LTBP4Q8N2S1 1624 aa10.27□□□□□ -0.77
CLRN1-202ENST00000327047 LRRC9Q6ZRR7 1453 aa10.26□□□□□ -0.77
CLRN1-202ENST00000327047 EFCAB5A4FU69 1503 aa10.25□□□□□ -0.77
CLRN1-202ENST00000327047 STRCQ7RTU9 1775 aa10.25□□□□□ -0.77
CLRN1-202ENST00000327047 CCNB3Q8WWL7 1395 aa10.25□□□□□ -0.77
CLRN1-202ENST00000327047 ANP32CO43423 234 aa10.24□□□□□ -0.77
CLRN1-202ENST00000327047 PPP1R15AO75807 674 aaPredicted RBP10.24□□□□□ -0.77
CLRN1-202ENST00000327047 ARAP3Q8WWN8 1544 aa10.24□□□□□ -0.77
CLRN1-202ENST00000327047 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
CLRN1-202ENST00000327047 CTTNBP2Q8WZ74 1663 aa10.24□□□□□ -0.77
CLRN1-202ENST00000327047 CASKIN1Q8WXD9 1431 aa10.24□□□□□ -0.77
CLRN1-202ENST00000327047 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
CLRN1-202ENST00000327047 PHLDB1Q86UU1 1377 aa10.23□□□□□ -0.77
CLRN1-202ENST00000327047 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
CLRN1-202ENST00000327047 CCER2I3L3R5 266 aa10.22□□□□□ -0.77
CLRN1-202ENST00000327047 SIN3AQ96ST3 1273 aa10.22□□□□□ -0.77
CLRN1-202ENST00000327047 SAMD9Q5K651 1589 aa10.21□□□□□ -0.77
CLRN1-202ENST00000327047 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
CLRN1-202ENST00000327047 MYT1LQ9UL68 1186 aa10.21□□□□□ -0.77
CLRN1-202ENST00000327047 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
CLRN1-202ENST00000327047 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
CLRN1-202ENST00000327047 NBR1Q14596 966 aa10.2□□□□□ -0.78
CLRN1-202ENST00000327047 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
CLRN1-202ENST00000327047 HNRNPUQ00839 825 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLRN1-202ENST00000327047 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
CLRN1-202ENST00000327047 KDM5BQ9UGL1 1544 aa10.17□□□□□ -0.78
CLRN1-202ENST00000327047 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
CLRN1-202ENST00000327047 ZCCHC11Q5TAX3 1644 aaKnown RBP10.14□□□□□ -0.79
CLRN1-202ENST00000327047 C14orf37Q86TY3 774 aa10.14□□□□□ -0.79
CLRN1-202ENST00000327047 LRRIQ1Q96JM4 1722 aa10.13□□□□□ -0.79
CLRN1-202ENST00000327047 NOP58Q9Y2X3 529 aaKnown RBP10.13□□□□□ -0.79
CLRN1-202ENST00000327047 PIAS4Q8N2W9 510 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-202ENST00000327047 ARHGEF40Q8TER5 1519 aa10.12□□□□□ -0.79
CLRN1-202ENST00000327047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLRN1-202ENST00000327047 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-202ENST00000327047 B4GALNT3Q6L9W6 998 aa10.12□□□□□ -0.79
CLRN1-202ENST00000327047 SALL2Q9Y467 1007 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-202ENST00000327047 FER1L4A9Z1Z3 1794 aa10.12□□□□□ -0.79
CLRN1-202ENST00000327047 PPP4R2Q9NY27 417 aa10.11□□□□□ -0.79
CLRN1-202ENST00000327047 SETD5Q9C0A6 1442 aa10.11□□□□□ -0.79
CLRN1-202ENST00000327047 IQGAP2Q13576 1575 aa10.1□□□□□ -0.79
CLRN1-202ENST00000327047 POGZQ7Z3K3 1410 aa10.1□□□□□ -0.79
CLRN1-202ENST00000327047 UGGT2Q9NYU1 1516 aa10.1□□□□□ -0.79
CLRN1-202ENST00000327047 PTPRGP23470 1445 aa10.1□□□□□ -0.79
CLRN1-202ENST00000327047 HSPA2P54652 639 aa10.09□□□□□ -0.79
CLRN1-202ENST00000327047 FAM50AQ14320 339 aaKnown RBP10.09□□□□□ -0.79
CLRN1-202ENST00000327047 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
CLRN1-202ENST00000327047 FGD6Q6ZV73 1430 aa10.08□□□□□ -0.8
CLRN1-202ENST00000327047 CCDC136Q96JN2 1154 aa10.08□□□□□ -0.8
CLRN1-202ENST00000327047 PTPRKQ15262 1439 aa10.08□□□□□ -0.8
CLRN1-202ENST00000327047 MTUS2Q5JR59 1369 aa10.08□□□□□ -0.8
CLRN1-202ENST00000327047 NCOA2Q15596 1464 aa10.07□□□□□ -0.8
CLRN1-202ENST00000327047 DISP1Q96F81 1524 aa10.07□□□□□ -0.8
CLRN1-202ENST00000327047 FANCAO15360 1455 aa10.07□□□□□ -0.8
CLRN1-202ENST00000327047 SETD1BQ9UPS6 1966 aaKnown RBP10.06□□□□□ -0.8
CLRN1-202ENST00000327047 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
CLRN1-202ENST00000327047 UACAQ9BZF9 1416 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms