RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 HSPA5P11021 654 aaKnown RBP25.04■■□□□ 1.6
TRAPPC12-201ENST00000324266 HNRNPUQ00839 825 aaKnown RBP eCLIP25.04■■□□□ 1.6
TRAPPC12-201ENST00000324266 KIAA0586Q9BVV6 1533 aa25.03■■□□□ 1.6
TRAPPC12-201ENST00000324266 WASHC2AQ641Q2 1341 aa25.02■■□□□ 1.6
TRAPPC12-201ENST00000324266 ARID3CA6NKF2 412 aa25.01■■□□□ 1.59
TRAPPC12-201ENST00000324266 DENND4BO75064 1496 aaPredicted RBP25■■□□□ 1.59
TRAPPC12-201ENST00000324266 NUP160Q12769 1436 aa24.99■■□□□ 1.59
TRAPPC12-201ENST00000324266 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
TRAPPC12-201ENST00000324266 CHD1O14646 1710 aa24.98■■□□□ 1.59
TRAPPC12-201ENST00000324266 KDM6BO15054 1643 aa24.97■■□□□ 1.59
TRAPPC12-201ENST00000324266 IRX6P78412 446 aaPredicted RBP24.96■■□□□ 1.59
TRAPPC12-201ENST00000324266 FOXD1Q16676 465 aa24.96■■□□□ 1.59
TRAPPC12-201ENST00000324266 TCOF1Q13428 1488 aaKnown RBP24.93■■□□□ 1.58
TRAPPC12-201ENST00000324266 MPHOSPH9Q99550 1183 aa24.92■■□□□ 1.58
TRAPPC12-201ENST00000324266 EIF4G2P78344 907 aaKnown RBP eCLIP24.91■■□□□ 1.582e-9■■■□□ 17.1
TRAPPC12-201ENST00000324266 L3MBTL2Q969R5 705 aa24.9■■□□□ 1.58
TRAPPC12-201ENST00000324266 GCC2Q8IWJ2 1684 aa24.9■■□□□ 1.58
TRAPPC12-201ENST00000324266 CCDC184Q52MB2 194 aa24.9■■□□□ 1.58
TRAPPC12-201ENST00000324266 JPH4Q96JJ6 628 aa24.89■■□□□ 1.58
TRAPPC12-201ENST00000324266 HECW1Q76N89 1606 aa24.89■■□□□ 1.58
TRAPPC12-201ENST00000324266 CDK13Q14004 1512 aaKnown RBP24.89■■□□□ 1.58
TRAPPC12-201ENST00000324266 EPRSP07814 1512 aaKnown RBP24.87■■□□□ 1.57
TRAPPC12-201ENST00000324266 C11orf95C9JLR9 678 aaPredicted RBP24.87■■□□□ 1.57
TRAPPC12-201ENST00000324266 EIF5BO60841 1220 aaKnown RBP24.86■■□□□ 1.57
TRAPPC12-201ENST00000324266 DISP1Q96F81 1524 aa24.85■■□□□ 1.57
TRAPPC12-201ENST00000324266 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC12-201ENST00000324266 AKNAQ7Z591 1439 aa24.82■■□□□ 1.56
TRAPPC12-201ENST00000324266 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
TRAPPC12-201ENST00000324266 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
TRAPPC12-201ENST00000324266 MIA2Q96PC5 1412 aa24.79■■□□□ 1.56
TRAPPC12-201ENST00000324266 NBPF8Q3BBV2 869 aa24.78■■□□□ 1.56
TRAPPC12-201ENST00000324266 FAM9BQ8IZU0 186 aa24.77■■□□□ 1.56
TRAPPC12-201ENST00000324266 CCDC7Q96M83 1385 aa24.76■■□□□ 1.55
TRAPPC12-201ENST00000324266 PRKRIP1Q9H875 184 aaPredicted RBP24.76■■□□□ 1.55
TRAPPC12-201ENST00000324266 IL27Q8NEV9 243 aa24.75■■□□□ 1.55
TRAPPC12-201ENST00000324266 ZNF644Q9H582 1327 aaPredicted RBP24.75■■□□□ 1.55
TRAPPC12-201ENST00000324266 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
TRAPPC12-201ENST00000324266 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
TRAPPC12-201ENST00000324266 CARMIL2Q6F5E8 1435 aa24.72■■□□□ 1.55
TRAPPC12-201ENST00000324266 ANKRD30BQ9BXX2 1392 aa24.72■■□□□ 1.55
TRAPPC12-201ENST00000324266 MRS2Q9HD23 443 aa24.72■■□□□ 1.55
TRAPPC12-201ENST00000324266 CDK11AQ9UQ88 783 aaPredicted RBP24.72■■□□□ 1.55
TRAPPC12-201ENST00000324266 DAPK1P53355 1430 aa24.7■■□□□ 1.55
TRAPPC12-201ENST00000324266 PKNOX2Q96KN3 472 aa24.69■■□□□ 1.54
TRAPPC12-201ENST00000324266 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
TRAPPC12-201ENST00000324266 RPRD2Q5VT52 1461 aaKnown RBP24.68■■□□□ 1.54
TRAPPC12-201ENST00000324266 ABCC5O15440 1437 aa24.67■■□□□ 1.54
TRAPPC12-201ENST00000324266 NBR1Q14596 966 aa24.67■■□□□ 1.54
TRAPPC12-201ENST00000324266 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
TRAPPC12-201ENST00000324266 RTN4Q9NQC3 1192 aaKnown RBP24.66■■□□□ 1.54
TRAPPC12-201ENST00000324266 TEX14Q8IWB6 1497 aa24.66■■□□□ 1.54
TRAPPC12-201ENST00000324266 KIF7Q2M1P5 1343 aa24.66■■□□□ 1.54
TRAPPC12-201ENST00000324266 ROCK1Q13464 1354 aa24.64■■□□□ 1.54
TRAPPC12-201ENST00000324266 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
TRAPPC12-201ENST00000324266 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC12-201ENST00000324266 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
TRAPPC12-201ENST00000324266 PPP4R2Q9NY27 417 aa24.62■■□□□ 1.53
TRAPPC12-201ENST00000324266 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
TRAPPC12-201ENST00000324266 SPATA31E1Q6ZUB1 1445 aa24.6■■□□□ 1.53
TRAPPC12-201ENST00000324266 DNMT1P26358 1616 aaKnown RBP24.6■■□□□ 1.53
TRAPPC12-201ENST00000324266 ZBED9Q6R2W3 1325 aa24.59■■□□□ 1.53
TRAPPC12-201ENST00000324266 PLB1Q6P1J6 1458 aa24.59■■□□□ 1.53
TRAPPC12-201ENST00000324266 SLC24A1O60721 1099 aa24.59■■□□□ 1.53
TRAPPC12-201ENST00000324266 NOP58Q9Y2X3 529 aaKnown RBP24.58■■□□□ 1.53
TRAPPC12-201ENST00000324266 B4GALNT3Q6L9W6 998 aa24.58■■□□□ 1.52
TRAPPC12-201ENST00000324266 NUP153P49790 1475 aaKnown RBP24.57■■□□□ 1.52
TRAPPC12-201ENST00000324266 PTPRGP23470 1445 aa24.55■■□□□ 1.52
TRAPPC12-201ENST00000324266 POLR3GLQ9BT43 218 aa24.55■■□□□ 1.52
TRAPPC12-201ENST00000324266 ZNF326Q5BKZ1 582 aaKnown RBP24.54■■□□□ 1.52
TRAPPC12-201ENST00000324266 RAPGEF6Q8TEU7 1601 aa24.52■■□□□ 1.52
TRAPPC12-201ENST00000324266 PZPP20742 1482 aa24.51■■□□□ 1.51
TRAPPC12-201ENST00000324266 ZNF777Q9ULD5 760 aaPredicted RBP24.51■■□□□ 1.51
TRAPPC12-201ENST00000324266 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
TRAPPC12-201ENST00000324266 SENP3-EIF4A1A0A087X0R7 540 aa24.47■■□□□ 1.51
TRAPPC12-201ENST00000324266 RTL5Q5HYW3 569 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC12-201ENST00000324266 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC12-201ENST00000324266 CAMSAP2Q08AD1 1489 aa24.46■■□□□ 1.51
TRAPPC12-201ENST00000324266 PAK3O75914 559 aaPredicted RBP24.45■■□□□ 1.5
TRAPPC12-201ENST00000324266 DHX29Q7Z478 1369 aaKnown RBP24.45■■□□□ 1.5
TRAPPC12-201ENST00000324266 USP47Q96K76 1375 aa24.44■■□□□ 1.5
TRAPPC12-201ENST00000324266 ABCA8O94911 1581 aa24.44■■□□□ 1.5
TRAPPC12-201ENST00000324266 PKD2Q13563 968 aa24.43■■□□□ 1.5
TRAPPC12-201ENST00000324266 BCORL1Q5H9F3 1711 aa24.42■■□□□ 1.5
TRAPPC12-201ENST00000324266 TROQ12816 1431 aaPredicted RBP24.41■■□□□ 1.5
TRAPPC12-201ENST00000324266 MBD5Q9P267 1494 aa24.4■■□□□ 1.5
TRAPPC12-201ENST00000324266 KIAA1107Q9UPP5 1409 aa24.4■■□□□ 1.5
TRAPPC12-201ENST00000324266 GPATCH8Q9UKJ3 1502 aaKnown RBP24.38■■□□□ 1.49
TRAPPC12-201ENST00000324266 KIF14Q15058 1648 aa24.35■■□□□ 1.49
TRAPPC12-201ENST00000324266 SMG6Q86US8 1419 aaKnown RBP24.34■■□□□ 1.49
TRAPPC12-201ENST00000324266 ATP10BO94823 1461 aa24.34■■□□□ 1.49
TRAPPC12-201ENST00000324266 ADGBQ8N7X0 1667 aa24.33■■□□□ 1.49
TRAPPC12-201ENST00000324266 PLEKHG5O94827 1062 aa24.32■■□□□ 1.48
TRAPPC12-201ENST00000324266 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
TRAPPC12-201ENST00000324266 ANKRD30AQ9BXX3 1397 aa24.31■■□□□ 1.48
TRAPPC12-201ENST00000324266 ITSN2Q9NZM3 1697 aa24.3■■□□□ 1.48
TRAPPC12-201ENST00000324266 KDM5CP41229 1560 aa24.3■■□□□ 1.48
TRAPPC12-201ENST00000324266 ADGRL2O95490 1459 aa24.3■■□□□ 1.48
TRAPPC12-201ENST00000324266 DAXXQ9UER7 740 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC12-201ENST00000324266 ANKRD50Q9ULJ7 1429 aa24.3■■□□□ 1.48
TRAPPC12-201ENST00000324266 CARD11Q9BXL7 1154 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms