RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
SRRM1-201ENST00000323848 PLB1Q6P1J6 1458 aa18.48■□□□□ 0.55
SRRM1-201ENST00000323848 KIF3BO15066 747 aa18.48■□□□□ 0.55
SRRM1-201ENST00000323848 ANKRD30AQ9BXX3 1397 aa18.48■□□□□ 0.55
SRRM1-201ENST00000323848 AFAP1Q8N556 730 aa18.46■□□□□ 0.55
SRRM1-201ENST00000323848 EFCAB2Q5VUJ9 269 aa18.45■□□□□ 0.54
SRRM1-201ENST00000323848 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
SRRM1-201ENST00000323848 NBPF8Q3BBV2 869 aa18.44■□□□□ 0.54
SRRM1-201ENST00000323848 PTPRKQ15262 1439 aa18.44■□□□□ 0.54
SRRM1-201ENST00000323848 CYB5RLQ6IPT4 315 aa18.44■□□□□ 0.54
SRRM1-201ENST00000323848 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
SRRM1-201ENST00000323848 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
SRRM1-201ENST00000323848 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
SRRM1-201ENST00000323848 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
SRRM1-201ENST00000323848 UACAQ9BZF9 1416 aa18.39■□□□□ 0.53
SRRM1-201ENST00000323848 ESF1Q9H501 851 aaKnown RBP18.39■□□□□ 0.53
SRRM1-201ENST00000323848 NAIPQ13075 1403 aa18.37■□□□□ 0.53
SRRM1-201ENST00000323848 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
SRRM1-201ENST00000323848 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
SRRM1-201ENST00000323848 EFCAB5A4FU69 1503 aa18.36■□□□□ 0.53
SRRM1-201ENST00000323848 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
SRRM1-201ENST00000323848 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
SRRM1-201ENST00000323848 B4GALNT3Q6L9W6 998 aa18.34■□□□□ 0.53
SRRM1-201ENST00000323848 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
SRRM1-201ENST00000323848 ROCK2O75116 1388 aaKnown RBP18.33■□□□□ 0.53
SRRM1-201ENST00000323848 IQGAP2Q13576 1575 aa18.33■□□□□ 0.53
SRRM1-201ENST00000323848 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.52
SRRM1-201ENST00000323848 STK26Q9P289 416 aa18.33■□□□□ 0.52
SRRM1-201ENST00000323848 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
SRRM1-201ENST00000323848 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
SRRM1-201ENST00000323848 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
SRRM1-201ENST00000323848 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
SRRM1-201ENST00000323848 HFM1A2PYH4 1435 aa18.3■□□□□ 0.52
SRRM1-201ENST00000323848 GRIN2AQ12879 1464 aa18.3■□□□□ 0.52
SRRM1-201ENST00000323848 ANKRD50Q9ULJ7 1429 aa18.29■□□□□ 0.52
SRRM1-201ENST00000323848 NBPF1Q3BBV0 1214 aa18.29■□□□□ 0.52
SRRM1-201ENST00000323848 CCDC136Q96JN2 1154 aa18.29■□□□□ 0.52
SRRM1-201ENST00000323848 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
SRRM1-201ENST00000323848 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.529e-8■■□□□ 12.8
SRRM1-201ENST00000323848 THOC2Q8NI27 1593 aaKnown RBP18.27■□□□□ 0.52
SRRM1-201ENST00000323848 ARHGEF11O15085 1522 aa18.27■□□□□ 0.52
SRRM1-201ENST00000323848 CCER2I3L3R5 266 aa18.27■□□□□ 0.51
SRRM1-201ENST00000323848 SLC24A1O60721 1099 aa18.27■□□□□ 0.51
SRRM1-201ENST00000323848 PPM1GO15355 546 aaPredicted RBP18.26■□□□□ 0.51
SRRM1-201ENST00000323848 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
SRRM1-201ENST00000323848 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
SRRM1-201ENST00000323848 CUL7Q14999 1698 aa18.26■□□□□ 0.51
SRRM1-201ENST00000323848 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
SRRM1-201ENST00000323848 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
SRRM1-201ENST00000323848 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
SRRM1-201ENST00000323848 USP47Q96K76 1375 aa18.23■□□□□ 0.51
SRRM1-201ENST00000323848 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
SRRM1-201ENST00000323848 DAPK1P53355 1430 aa18.22■□□□□ 0.51
SRRM1-201ENST00000323848 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
SRRM1-201ENST00000323848 TMF1P82094 1093 aa18.2■□□□□ 0.5
SRRM1-201ENST00000323848 MAPKBP1O60336 1514 aa18.2■□□□□ 0.5
SRRM1-201ENST00000323848 ABCC5O15440 1437 aa18.2■□□□□ 0.5
SRRM1-201ENST00000323848 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
SRRM1-201ENST00000323848 SUPT6HQ7KZ85 1726 aaKnown RBP18.19■□□□□ 0.5
SRRM1-201ENST00000323848 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
SRRM1-201ENST00000323848 WASHC2CQ9Y4E1 1318 aa18.17■□□□□ 0.5
SRRM1-201ENST00000323848 PANK3Q9H999 370 aa18.17■□□□□ 0.5
SRRM1-201ENST00000323848 HECW1Q76N89 1606 aa18.17■□□□□ 0.5
SRRM1-201ENST00000323848 PTPN23Q9H3S7 1636 aa18.17■□□□□ 0.5
SRRM1-201ENST00000323848 SOX12O15370 315 aa18.15■□□□□ 0.5
SRRM1-201ENST00000323848 RAPGEF3O95398 923 aa18.15■□□□□ 0.5
SRRM1-201ENST00000323848 C9orf84Q5VXU9 1444 aa18.15■□□□□ 0.5
SRRM1-201ENST00000323848 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
SRRM1-201ENST00000323848 ARHGAP5Q13017 1502 aa18.14■□□□□ 0.49
SRRM1-201ENST00000323848 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.49
SRRM1-201ENST00000323848 CCDC7Q96M83 1385 aa18.14■□□□□ 0.49
SRRM1-201ENST00000323848 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
SRRM1-201ENST00000323848 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
SRRM1-201ENST00000323848 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
SRRM1-201ENST00000323848 KANK1Q14678 1352 aa18.12■□□□□ 0.49
SRRM1-201ENST00000323848 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
SRRM1-201ENST00000323848 TMEM132EQ6IEE7 984 aa18.12■□□□□ 0.49
SRRM1-201ENST00000323848 POGKQ9P215 609 aa18.12■□□□□ 0.49
SRRM1-201ENST00000323848 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
SRRM1-201ENST00000323848 DAXXQ9UER7 740 aaPredicted RBP18.1■□□□□ 0.49
SRRM1-201ENST00000323848 SRPK2P78362 688 aaKnown RBP18.09■□□□□ 0.49
SRRM1-201ENST00000323848 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.48
SRRM1-201ENST00000323848 SCAPERQ9BY12 1400 aa18.08■□□□□ 0.48
SRRM1-201ENST00000323848 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.48
SRRM1-201ENST00000323848 CFAP70Q5T0N1 1121 aa18.07■□□□□ 0.48
SRRM1-201ENST00000323848 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
SRRM1-201ENST00000323848 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
SRRM1-201ENST00000323848 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
SRRM1-201ENST00000323848 CTTNBP2Q8WZ74 1663 aa18.06■□□□□ 0.48
SRRM1-201ENST00000323848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
SRRM1-201ENST00000323848 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
SRRM1-201ENST00000323848 ZBTB7CA1YPR0 619 aa18.05■□□□□ 0.48
SRRM1-201ENST00000323848 FAM69CQ0P6D2 419 aa18.04■□□□□ 0.48
SRRM1-201ENST00000323848 ATP10BO94823 1461 aa18.04■□□□□ 0.48
SRRM1-201ENST00000323848 PLIN1O60240 522 aa18.04■□□□□ 0.48
SRRM1-201ENST00000323848 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
SRRM1-201ENST00000323848 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
SRRM1-201ENST00000323848 DISP1Q96F81 1524 aa18.02■□□□□ 0.48
SRRM1-201ENST00000323848 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
SRRM1-201ENST00000323848 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms