RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.63■■□□□ 1.21
PPP3CA-201ENST00000323055 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
PPP3CA-201ENST00000323055 PPM1GO15355 546 aaPredicted RBP22.61■■□□□ 1.21
PPP3CA-201ENST00000323055 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
PPP3CA-201ENST00000323055 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
PPP3CA-201ENST00000323055 CASKIN1Q8WXD9 1431 aa22.6■■□□□ 1.21
PPP3CA-201ENST00000323055 POGKQ9P215 609 aa22.59■■□□□ 1.21
PPP3CA-201ENST00000323055 MYOM3Q5VTT5 1437 aa22.59■■□□□ 1.21
PPP3CA-201ENST00000323055 RSPH4AQ5TD94 716 aa22.58■■□□□ 1.2
PPP3CA-201ENST00000323055 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
PPP3CA-201ENST00000323055 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
PPP3CA-201ENST00000323055 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
PPP3CA-201ENST00000323055 NCOA2Q15596 1464 aa22.53■■□□□ 1.2
PPP3CA-201ENST00000323055 CFAP53Q96M91 514 aa22.51■■□□□ 1.19
PPP3CA-201ENST00000323055 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
PPP3CA-201ENST00000323055 STK26Q9P289 416 aa22.5■■□□□ 1.19
PPP3CA-201ENST00000323055 RRBP1Q9P2E9 1410 aaKnown RBP22.5■■□□□ 1.19
PPP3CA-201ENST00000323055 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
PPP3CA-201ENST00000323055 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
PPP3CA-201ENST00000323055 B4GALNT3Q6L9W6 998 aa22.47■■□□□ 1.19
PPP3CA-201ENST00000323055 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
PPP3CA-201ENST00000323055 ZBTB7CA1YPR0 619 aa22.45■■□□□ 1.19
PPP3CA-201ENST00000323055 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
PPP3CA-201ENST00000323055 NUTM2DQ5VT03 806 aaPredicted RBP22.45■■□□□ 1.18
PPP3CA-201ENST00000323055 SRPK2P78362 688 aaKnown RBP22.44■■□□□ 1.18
PPP3CA-201ENST00000323055 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
PPP3CA-201ENST00000323055 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
PPP3CA-201ENST00000323055 PPP4R2Q9NY27 417 aa22.41■■□□□ 1.18
PPP3CA-201ENST00000323055 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
PPP3CA-201ENST00000323055 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
PPP3CA-201ENST00000323055 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
PPP3CA-201ENST00000323055 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.18
PPP3CA-201ENST00000323055 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.17
PPP3CA-201ENST00000323055 KTN1Q86UP2 1357 aaKnown RBP22.38■■□□□ 1.17
PPP3CA-201ENST00000323055 CCDC144AA2RUR9 1427 aa22.38■■□□□ 1.17
PPP3CA-201ENST00000323055 OSCARQ8IYS5 282 aa22.38■■□□□ 1.17
PPP3CA-201ENST00000323055 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
PPP3CA-201ENST00000323055 MORC1Q86VD1 984 aa22.36■■□□□ 1.17
PPP3CA-201ENST00000323055 UPF2Q9HAU5 1272 aaKnown RBP22.35■■□□□ 1.17
PPP3CA-201ENST00000323055 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
PPP3CA-201ENST00000323055 KIF15Q9NS87 1388 aa22.34■■□□□ 1.17
PPP3CA-201ENST00000323055 TIAM1Q13009 1591 aa22.34■■□□□ 1.17
PPP3CA-201ENST00000323055 EFCAB5A4FU69 1503 aa22.34■■□□□ 1.17
PPP3CA-201ENST00000323055 FRAT1Q92837 279 aaPredicted RBP22.34■■□□□ 1.17
PPP3CA-201ENST00000323055 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
PPP3CA-201ENST00000323055 LAS1LQ9Y4W2 734 aaKnown RBP22.34■■□□□ 1.17
PPP3CA-201ENST00000323055 NBR1Q14596 966 aa22.32■■□□□ 1.16
PPP3CA-201ENST00000323055 MAPK8IP3Q9UPT6 1336 aa22.32■■□□□ 1.16
PPP3CA-201ENST00000323055 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
PPP3CA-201ENST00000323055 SOX12O15370 315 aa22.3■■□□□ 1.16
PPP3CA-201ENST00000323055 RALBP1Q15311 655 aa22.3■■□□□ 1.16
PPP3CA-201ENST00000323055 PRKRIP1Q9H875 184 aaPredicted RBP22.3■■□□□ 1.16
PPP3CA-201ENST00000323055 USP47Q96K76 1375 aa22.3■■□□□ 1.16
PPP3CA-201ENST00000323055 ANKRD50Q9ULJ7 1429 aa22.3■■□□□ 1.16
PPP3CA-201ENST00000323055 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
PPP3CA-201ENST00000323055 TRAK1Q9UPV9 953 aa22.29■■□□□ 1.16
PPP3CA-201ENST00000323055 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
PPP3CA-201ENST00000323055 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
PPP3CA-201ENST00000323055 HSP90AA1P07900 732 aaKnown RBP22.25■■□□□ 1.15
PPP3CA-201ENST00000323055 LMOD2Q6P5Q4 547 aa22.25■■□□□ 1.15
PPP3CA-201ENST00000323055 PANK3Q9H999 370 aa22.23■■□□□ 1.15
PPP3CA-201ENST00000323055 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
PPP3CA-201ENST00000323055 RGS3P49796 1198 aa22.22■■□□□ 1.15
PPP3CA-201ENST00000323055 FTSJ3Q8IY81 847 aaKnown RBP22.22■■□□□ 1.15
PPP3CA-201ENST00000323055 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
PPP3CA-201ENST00000323055 HDGFP51858 240 aaKnown RBP22.18■■□□□ 1.14
PPP3CA-201ENST00000323055 TROQ12816 1431 aaPredicted RBP22.18■■□□□ 1.14
PPP3CA-201ENST00000323055 HFM1A2PYH4 1435 aa22.18■■□□□ 1.14
PPP3CA-201ENST00000323055 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 KIF7Q2M1P5 1343 aa22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 KIAA0586Q9BVV6 1533 aa22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 U2AF1L5P0DN76 240 aaPredicted RBP22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 U2AF1Q01081 240 aaKnown RBP eCLIP22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 MYH16Q9H6N6 1097 aa22.17■■□□□ 1.14
PPP3CA-201ENST00000323055 EHBP1L1Q8N3D4 1523 aa22.16■■□□□ 1.14
PPP3CA-201ENST00000323055 RCAN3Q9UKA8 241 aa22.16■■□□□ 1.14
PPP3CA-201ENST00000323055 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
PPP3CA-201ENST00000323055 EPRSP07814 1512 aaKnown RBP22.15■■□□□ 1.14
PPP3CA-201ENST00000323055 CCDC146Q8IYE0 955 aa22.15■■□□□ 1.14
PPP3CA-201ENST00000323055 EIF3AQ14152 1382 aaKnown RBP22.15■■□□□ 1.14
PPP3CA-201ENST00000323055 ZNF608Q9ULD9 1512 aaPredicted RBP22.14■■□□□ 1.14
PPP3CA-201ENST00000323055 NBPF8Q3BBV2 869 aa22.14■■□□□ 1.14
PPP3CA-201ENST00000323055 MIA2Q96PC5 1412 aa22.14■■□□□ 1.13
PPP3CA-201ENST00000323055 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
PPP3CA-201ENST00000323055 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
PPP3CA-201ENST00000323055 NAIPQ13075 1403 aa22.1■■□□□ 1.13
PPP3CA-201ENST00000323055 A0A0G2JS52 829 aa22.1■■□□□ 1.13
PPP3CA-201ENST00000323055 MYBBP1AQ9BQG0 1328 aaKnown RBP22.09■■□□□ 1.13
PPP3CA-201ENST00000323055 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
PPP3CA-201ENST00000323055 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
PPP3CA-201ENST00000323055 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
PPP3CA-201ENST00000323055 PLB1Q6P1J6 1458 aa22.08■■□□□ 1.13
PPP3CA-201ENST00000323055 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
PPP3CA-201ENST00000323055 C9orf84Q5VXU9 1444 aa22.06■■□□□ 1.12
PPP3CA-201ENST00000323055 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
PPP3CA-201ENST00000323055 RBM19Q9Y4C8 960 aaKnown RBP22.05■■□□□ 1.12
PPP3CA-201ENST00000323055 DAPK1P53355 1430 aa22.05■■□□□ 1.12
PPP3CA-201ENST00000323055 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms