RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 MRS2Q9HD23 443 aa10.57□□□□□ -0.72
CD46-201ENST00000322875 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
CD46-201ENST00000322875 DHX29Q7Z478 1369 aaKnown RBP10.54□□□□□ -0.72
CD46-201ENST00000322875 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
CD46-201ENST00000322875 FHOD3Q2V2M9 1422 aa10.53□□□□□ -0.72
CD46-201ENST00000322875 KDM6BO15054 1643 aa10.52□□□□□ -0.72
CD46-201ENST00000322875 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.72
CD46-201ENST00000322875 TEX14Q8IWB6 1497 aa10.52□□□□□ -0.73
CD46-201ENST00000322875 CTTNBP2Q8WZ74 1663 aa10.52□□□□□ -0.73
CD46-201ENST00000322875 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.73
CD46-201ENST00000322875 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
CD46-201ENST00000322875 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
CD46-201ENST00000322875 NEFMP07197 916 aa10.51□□□□□ -0.73
CD46-201ENST00000322875 TCERG1O14776 1098 aaKnown RBP10.5□□□□□ -0.73
CD46-201ENST00000322875 BACH2Q9BYV9 841 aa10.5□□□□□ -0.73
CD46-201ENST00000322875 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
CD46-201ENST00000322875 UGGT2Q9NYU1 1516 aa10.5□□□□□ -0.73
CD46-201ENST00000322875 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
CD46-201ENST00000322875 MS4A1P11836 297 aa10.49□□□□□ -0.73
CD46-201ENST00000322875 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
CD46-201ENST00000322875 SAMD9Q5K651 1589 aa10.48□□□□□ -0.73
CD46-201ENST00000322875 PDE4AP27815 886 aa10.48□□□□□ -0.73
CD46-201ENST00000322875 MIA2Q96PC5 1412 aa10.47□□□□□ -0.73
CD46-201ENST00000322875 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
CD46-201ENST00000322875 GRIN2BQ13224 1484 aa10.47□□□□□ -0.73
CD46-201ENST00000322875 EHBP1L1Q8N3D4 1523 aa10.47□□□□□ -0.73
CD46-201ENST00000322875 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
CD46-201ENST00000322875 L3MBTL2Q969R5 705 aa10.47□□□□□ -0.73
CD46-201ENST00000322875 BRPF3Q9ULD4 1205 aa10.47□□□□□ -0.73
CD46-201ENST00000322875 GSE1Q14687 1217 aa10.46□□□□□ -0.73
CD46-201ENST00000322875 NBPF8Q3BBV2 869 aa10.46□□□□□ -0.74
CD46-201ENST00000322875 LAS1LQ9Y4W2 734 aaKnown RBP10.46□□□□□ -0.74
CD46-201ENST00000322875 URB2Q14146 1524 aaKnown RBP10.45□□□□□ -0.74
CD46-201ENST00000322875 ANKRD30BQ9BXX2 1392 aa10.45□□□□□ -0.74
CD46-201ENST00000322875 CUL7Q14999 1698 aa10.45□□□□□ -0.74
CD46-201ENST00000322875 MBD5Q9P267 1494 aa10.45□□□□□ -0.74
CD46-201ENST00000322875 PNISRQ8TF01 805 aaKnown RBP10.45□□□□□ -0.74
CD46-201ENST00000322875 MAGI3Q5TCQ9 1506 aa10.44□□□□□ -0.74
CD46-201ENST00000322875 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
CD46-201ENST00000322875 RRP1P56182 461 aaKnown RBP10.43□□□□□ -0.74
CD46-201ENST00000322875 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
CD46-201ENST00000322875 P3H3Q8IVL6 736 aa10.43□□□□□ -0.74
CD46-201ENST00000322875 DNMBPQ6XZF7 1577 aa10.42□□□□□ -0.74
CD46-201ENST00000322875 KDM5CP41229 1560 aa10.42□□□□□ -0.74
CD46-201ENST00000322875 MPHOSPH9Q99550 1183 aa10.41□□□□□ -0.74
CD46-201ENST00000322875 ARID4BQ4LE39 1312 aaPredicted RBP10.41□□□□□ -0.74
CD46-201ENST00000322875 EXOC6Q8TAG9 804 aa10.41□□□□□ -0.74
CD46-201ENST00000322875 E9PCH4 1651 aa10.4□□□□□ -0.74
CD46-201ENST00000322875 NFKBIBQ15653 356 aa10.4□□□□□ -0.74
CD46-201ENST00000322875 ABCA10Q8WWZ4 1543 aa10.4□□□□□ -0.74
CD46-201ENST00000322875 NPM2Q86SE8 214 aaKnown RBP10.4□□□□□ -0.74
CD46-201ENST00000322875 FRAT1Q92837 279 aaPredicted RBP10.39□□□□□ -0.75
CD46-201ENST00000322875 DDRGK1Q96HY6 314 aa10.39□□□□□ -0.75
CD46-201ENST00000322875 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
CD46-201ENST00000322875 FAM43AQ8N2R8 423 aa10.39□□□□□ -0.75
CD46-201ENST00000322875 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
CD46-201ENST00000322875 KIF14Q15058 1648 aa10.39□□□□□ -0.75
CD46-201ENST00000322875 ATP1B4Q9UN42 357 aaPredicted RBP10.37□□□□□ -0.75
CD46-201ENST00000322875 BRD4O60885 1362 aaPredicted RBP10.36□□□□□ -0.75
CD46-201ENST00000322875 RRP7BPQ9NSQ0 103 aa10.36□□□□□ -0.75
CD46-201ENST00000322875 KTN1Q86UP2 1357 aaKnown RBP10.36□□□□□ -0.75
CD46-201ENST00000322875 ROCK1Q13464 1354 aa10.36□□□□□ -0.75
CD46-201ENST00000322875 RCAN3Q9UKA8 241 aa10.35□□□□□ -0.75
CD46-201ENST00000322875 ZMYM4Q5VZL5 1548 aa10.35□□□□□ -0.75
CD46-201ENST00000322875 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
CD46-201ENST00000322875 DCAF11Q8TEB1 546 aa10.34□□□□□ -0.75
CD46-201ENST00000322875 INSRP06213 1382 aa10.33□□□□□ -0.76
CD46-201ENST00000322875 PDE3BQ13370 1112 aa10.33□□□□□ -0.76
CD46-201ENST00000322875 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
CD46-201ENST00000322875 USP47Q96K76 1375 aa10.33□□□□□ -0.76
CD46-201ENST00000322875 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
CD46-201ENST00000322875 FOXD1Q16676 465 aa10.32□□□□□ -0.76
CD46-201ENST00000322875 TARBP1Q13395 1621 aaKnown RBP10.32□□□□□ -0.76
CD46-201ENST00000322875 UHRF1BP1Q6BDS2 1440 aa10.32□□□□□ -0.76
CD46-201ENST00000322875 PZPP20742 1482 aa10.32□□□□□ -0.76
CD46-201ENST00000322875 KIF15Q9NS87 1388 aa10.32□□□□□ -0.76
CD46-201ENST00000322875 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
CD46-201ENST00000322875 VIRMAQ69YN4 1812 aaKnown RBP10.31□□□□□ -0.76
CD46-201ENST00000322875 MYBBP1AQ9BQG0 1328 aaKnown RBP10.31□□□□□ -0.76
CD46-201ENST00000322875 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
CD46-201ENST00000322875 GAPVD1Q14C86 1478 aa10.3□□□□□ -0.76
CD46-201ENST00000322875 EIF5BO60841 1220 aaKnown RBP10.3□□□□□ -0.76
CD46-201ENST00000322875 TMC1Q8TDI8 760 aa10.3□□□□□ -0.76
CD46-201ENST00000322875 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
CD46-201ENST00000322875 RAD54L2Q9Y4B4 1467 aa10.29□□□□□ -0.76
CD46-201ENST00000322875 DAPK1P53355 1430 aa10.29□□□□□ -0.76
CD46-201ENST00000322875 POLA1P09884 1462 aaPredicted RBP10.29□□□□□ -0.76
CD46-201ENST00000322875 BLMP54132 1417 aaPredicted RBP10.29□□□□□ -0.76
CD46-201ENST00000322875 C8orf34Q49A92 452 aa10.29□□□□□ -0.76
CD46-201ENST00000322875 EIF4G3O43432 1585 aaKnown RBP10.28□□□□□ -0.76
CD46-201ENST00000322875 RALBP1Q15311 655 aa10.28□□□□□ -0.76
CD46-201ENST00000322875 PARD3Q8TEW0 1356 aa10.27□□□□□ -0.76
CD46-201ENST00000322875 FRAT2O75474 233 aaPredicted RBP10.27□□□□□ -0.76
CD46-201ENST00000322875 PKNOX2Q96KN3 472 aa10.27□□□□□ -0.76
CD46-201ENST00000322875 SKAP1Q86WV1 359 aa10.27□□□□□ -0.77
CD46-201ENST00000322875 ABCC5O15440 1437 aa10.27□□□□□ -0.77
CD46-201ENST00000322875 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
CD46-201ENST00000322875 EPRSP07814 1512 aaKnown RBP10.26□□□□□ -0.77
CD46-201ENST00000322875 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
CD46-201ENST00000322875 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms