RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 FER1L4A9Z1Z3 1794 aa32.92■■■□□ 2.86
SSNA1-201ENST00000322310 PLCH2O75038 1416 aa32.9■■■□□ 2.86
SSNA1-201ENST00000322310 CERKQ8TCT0 537 aa32.88■■■□□ 2.85
SSNA1-201ENST00000322310 ARHGEF12Q9NZN5 1544 aa32.83■■■□□ 2.85
SSNA1-201ENST00000322310 ATP10AO60312 1499 aa32.82■■■□□ 2.84
SSNA1-201ENST00000322310 C9orf84Q5VXU9 1444 aa32.8■■■□□ 2.84
SSNA1-201ENST00000322310 ATP1B4Q9UN42 357 aaPredicted RBP32.79■■■□□ 2.84
SSNA1-201ENST00000322310 CEBPAP49715 358 aaPredicted RBP32.77■■■□□ 2.84
SSNA1-201ENST00000322310 EFCAB2Q5VUJ9 269 aa32.76■■■□□ 2.83
SSNA1-201ENST00000322310 MYO5CQ9NQX4 1742 aa32.76■■■□□ 2.83
SSNA1-201ENST00000322310 PREX1Q8TCU6 1659 aa32.75■■■□□ 2.83
SSNA1-201ENST00000322310 EHMT2Q96KQ7 1210 aa32.74■■■□□ 2.83
SSNA1-201ENST00000322310 KIF14Q15058 1648 aa32.72■■■□□ 2.83
SSNA1-201ENST00000322310 FMN1Q68DA7 1419 aa32.68■■■□□ 2.82
SSNA1-201ENST00000322310 ZNF518AQ6AHZ1 1483 aa32.68■■■□□ 2.82
SSNA1-201ENST00000322310 AFAP1Q8N556 730 aa32.67■■■□□ 2.82
SSNA1-201ENST00000322310 CDK11AQ9UQ88 783 aaPredicted RBP32.65■■■□□ 2.82
SSNA1-201ENST00000322310 ARHGAP35Q9NRY4 1499 aa32.65■■■□□ 2.82
SSNA1-201ENST00000322310 ARHGAP5Q13017 1502 aa32.65■■■□□ 2.82
SSNA1-201ENST00000322310 UBTFP17480 764 aaKnown RBP32.64■■■□□ 2.82
SSNA1-201ENST00000322310 KDM5CP41229 1560 aa32.64■■■□□ 2.82
SSNA1-201ENST00000322310 STRCQ7RTU9 1775 aa32.63■■■□□ 2.81
SSNA1-201ENST00000322310 TROQ12816 1431 aaPredicted RBP32.61■■■□□ 2.81
SSNA1-201ENST00000322310 UHRF1BP1Q6BDS2 1440 aa32.6■■■□□ 2.81
SSNA1-201ENST00000322310 MYT1LQ9UL68 1186 aa32.6■■■□□ 2.81
SSNA1-201ENST00000322310 DIP2CQ9Y2E4 1556 aa32.59■■■□□ 2.81
SSNA1-201ENST00000322310 DMRT2Q9Y5R5 561 aa32.57■■■□□ 2.8
SSNA1-201ENST00000322310 CLIP1P30622 1438 aa32.55■■■□□ 2.8
SSNA1-201ENST00000322310 ABCA6Q8N139 1617 aa32.53■■■□□ 2.8
SSNA1-201ENST00000322310 LRRIQ1Q96JM4 1722 aa32.52■■■□□ 2.8
SSNA1-201ENST00000322310 REREQ9P2R6 1566 aa32.52■■■□□ 2.8
SSNA1-201ENST00000322310 DISP3Q9P2K9 1392 aa32.51■■■□□ 2.79
SSNA1-201ENST00000322310 C3P01024 1663 aa32.49■■■□□ 2.79
SSNA1-201ENST00000322310 CDC42BPBQ9Y5S2 1711 aa32.48■■■□□ 2.79
SSNA1-201ENST00000322310 MLH3Q9UHC1 1453 aa32.48■■■□□ 2.79
SSNA1-201ENST00000322310 ILDR2Q71H61 639 aa32.48■■■□□ 2.79
SSNA1-201ENST00000322310 TRAPPC8Q9Y2L5 1435 aa32.46■■■□□ 2.79
SSNA1-201ENST00000322310 SETD1BQ9UPS6 1966 aaKnown RBP32.45■■■□□ 2.79
SSNA1-201ENST00000322310 ABCC1P33527 1531 aa32.43■■■□□ 2.78
SSNA1-201ENST00000322310 PTPRTO14522 1441 aa32.43■■■□□ 2.78
SSNA1-201ENST00000322310 AGLP35573 1532 aa32.42■■■□□ 2.78
SSNA1-201ENST00000322310 PREX2Q70Z35 1606 aa32.42■■■□□ 2.78
SSNA1-201ENST00000322310 ESF1Q9H501 851 aaKnown RBP32.41■■■□□ 2.78
SSNA1-201ENST00000322310 ITSN2Q9NZM3 1697 aa32.38■■■□□ 2.77
SSNA1-201ENST00000322310 KIDINS220Q9ULH0 1771 aa32.35■■■□□ 2.77
SSNA1-201ENST00000322310 LTBP4Q8N2S1 1624 aa32.33■■■□□ 2.77
SSNA1-201ENST00000322310 SOCS7O14512 581 aa32.31■■■□□ 2.76
SSNA1-201ENST00000322310 NCOA1Q15788 1441 aa32.31■■■□□ 2.76
SSNA1-201ENST00000322310 CCDC18Q5T9S5 1454 aa32.3■■■□□ 2.76
SSNA1-201ENST00000322310 CNTLNQ9NXG0 1405 aa32.3■■■□□ 2.76
SSNA1-201ENST00000322310 CASKIN1Q8WXD9 1431 aa32.29■■■□□ 2.76
SSNA1-201ENST00000322310 CDC42BPAQ5VT25 1732 aa32.28■■■□□ 2.76
SSNA1-201ENST00000322310 SPATA31D1Q6ZQQ2 1576 aa32.28■■■□□ 2.76
SSNA1-201ENST00000322310 SAMD9LQ8IVG5 1584 aa32.24■■■□□ 2.75
SSNA1-201ENST00000322310 ZNF777Q9ULD5 760 aaPredicted RBP32.23■■■□□ 2.75
SSNA1-201ENST00000322310 CAMSAP1Q5T5Y3 1602 aa32.22■■■□□ 2.75
SSNA1-201ENST00000322310 NPATQ14207 1427 aa32.2■■■□□ 2.75
SSNA1-201ENST00000322310 IQSEC2Q5JU85 1478 aa32.2■■■□□ 2.75
SSNA1-201ENST00000322310 SYCP2Q9BX26 1530 aa32.2■■■□□ 2.74
SSNA1-201ENST00000322310 MROH2AA6NES4 1674 aa32.18■■■□□ 2.74
SSNA1-201ENST00000322310 CHIC1Q5VXU3 224 aa32.18■■■□□ 2.74
SSNA1-201ENST00000322310 ZMYM3Q14202 1370 aa32.18■■■□□ 2.74
SSNA1-201ENST00000322310 SPAG9O60271 1321 aaKnown RBP32.16■■■□□ 2.74
SSNA1-201ENST00000322310 SUPT6HQ7KZ85 1726 aaKnown RBP32.15■■■□□ 2.74
SSNA1-201ENST00000322310 HNRNPMP52272 730 aaKnown RBP eCLIP32.15■■■□□ 2.74
SSNA1-201ENST00000322310 NCKAP5LQ9HCH0 1330 aa32.15■■■□□ 2.74
SSNA1-201ENST00000322310 GPATCH8Q9UKJ3 1502 aaKnown RBP32.13■■■□□ 2.73
SSNA1-201ENST00000322310 FYCO1Q9BQS8 1478 aa32.12■■■□□ 2.73
SSNA1-201ENST00000322310 ZNF335Q9H4Z2 1342 aaPredicted RBP32.11■■■□□ 2.73
SSNA1-201ENST00000322310 CLTCQ00610 1675 aaKnown RBP32.1■■■□□ 2.73
SSNA1-201ENST00000322310 ATP7AQ04656 1500 aa32.1■■■□□ 2.73
SSNA1-201ENST00000322310 MYO3AQ8NEV4 1616 aa32.07■■■□□ 2.72
SSNA1-201ENST00000322310 PLXNC1O60486 1568 aa32.07■■■□□ 2.72
SSNA1-201ENST00000322310 INO80Q9ULG1 1556 aaPredicted RBP32.05■■■□□ 2.72
SSNA1-201ENST00000322310 A2MP01023 1474 aa32.04■■■□□ 2.72
SSNA1-201ENST00000322310 ZNF142P52746 1687 aaPredicted RBP32.04■■■□□ 2.72
SSNA1-201ENST00000322310 PTPRKQ15262 1439 aa32.02■■■□□ 2.72
SSNA1-201ENST00000322310 KIAA1107Q9UPP5 1409 aa32.02■■■□□ 2.72
SSNA1-201ENST00000322310 UBAP1LF5GYI3 381 aa32.02■■■□□ 2.72
SSNA1-201ENST00000322310 CEP170BQ9Y4F5 1589 aaPredicted RBP32.02■■■□□ 2.72
SSNA1-201ENST00000322310 GGT6Q6P531 493 aa32.01■■■□□ 2.71
SSNA1-201ENST00000322310 CFDP1Q9UEE9 299 aaPredicted RBP32.01■■■□□ 2.71
SSNA1-201ENST00000322310 PLA2R1Q13018 1463 aa32.01■■■□□ 2.71
SSNA1-201ENST00000322310 PKD2Q13563 968 aa31.99■■■□□ 2.71
SSNA1-201ENST00000322310 TCOF1Q13428 1488 aaKnown RBP31.98■■■□□ 2.71
SSNA1-201ENST00000322310 PLEKHH2Q8IVE3 1493 aa31.98■■■□□ 2.71
SSNA1-201ENST00000322310 CCNB3Q8WWL7 1395 aa31.96■■■□□ 2.71
SSNA1-201ENST00000322310 PPP6R1Q9UPN7 881 aa31.9■■■□□ 2.7
SSNA1-201ENST00000322310 ZNF644Q9H582 1327 aaPredicted RBP31.89■■■□□ 2.7
SSNA1-201ENST00000322310 ADGBQ8N7X0 1667 aa31.89■■■□□ 2.7
SSNA1-201ENST00000322310 MTUS2Q5JR59 1369 aa31.88■■■□□ 2.69
SSNA1-201ENST00000322310 A2ML1A8K2U0 1454 aa31.84■■■□□ 2.69
SSNA1-201ENST00000322310 DNMT1P26358 1616 aaKnown RBP31.84■■■□□ 2.69
SSNA1-201ENST00000322310 TIAM1Q13009 1591 aa31.82■■■□□ 2.68
SSNA1-201ENST00000322310 MBD5Q9P267 1494 aa31.82■■■□□ 2.68
SSNA1-201ENST00000322310 SCAF1Q9H7N4 1312 aaKnown RBP31.76■■■□□ 2.68
SSNA1-201ENST00000322310 FBXO31Q5XUX0 539 aaPredicted RBP31.76■■■□□ 2.67
SSNA1-201ENST00000322310 DHX29Q7Z478 1369 aaKnown RBP31.76■■■□□ 2.67
SSNA1-201ENST00000322310 RTEL1-TNFRSF6BF6WH68 1400 aa31.75■■■□□ 2.67
SSNA1-201ENST00000322310 NEURL4Q96JN8 1562 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms