RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 MYOM3Q5VTT5 1437 aa14.71□□□□□ -0.05
TOP3A-201ENST00000321105 CASKIN1Q8WXD9 1431 aa14.71□□□□□ -0.06
TOP3A-201ENST00000321105 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
TOP3A-201ENST00000321105 RRBP1Q9P2E9 1410 aaKnown RBP14.69□□□□□ -0.06
TOP3A-201ENST00000321105 NEFMP07197 916 aa14.69□□□□□ -0.06
TOP3A-201ENST00000321105 AFAP1Q8N556 730 aa14.68□□□□□ -0.06
TOP3A-201ENST00000321105 SPAG9O60271 1321 aaKnown RBP14.68□□□□□ -0.06
TOP3A-201ENST00000321105 PRG4Q92954 1404 aaPredicted RBP14.68□□□□□ -0.06
TOP3A-201ENST00000321105 ROCK2O75116 1388 aaKnown RBP14.67□□□□□ -0.06
TOP3A-201ENST00000321105 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
TOP3A-201ENST00000321105 URB2Q14146 1524 aaKnown RBP14.65□□□□□ -0.06
TOP3A-201ENST00000321105 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
TOP3A-201ENST00000321105 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-201ENST00000321105 SOX12O15370 315 aa14.64□□□□□ -0.07
TOP3A-201ENST00000321105 TMF1P82094 1093 aa14.64□□□□□ -0.07
TOP3A-201ENST00000321105 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-201ENST00000321105 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
TOP3A-201ENST00000321105 ZBTB7CA1YPR0 619 aa14.62□□□□□ -0.07
TOP3A-201ENST00000321105 POGKQ9P215 609 aa14.62□□□□□ -0.07
TOP3A-201ENST00000321105 CDK13Q14004 1512 aaKnown RBP14.62□□□□□ -0.07
TOP3A-201ENST00000321105 NBPF8Q3BBV2 869 aa14.62□□□□□ -0.07
TOP3A-201ENST00000321105 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
TOP3A-201ENST00000321105 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
TOP3A-201ENST00000321105 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-201ENST00000321105 MYT1Q01538 1121 aa14.61□□□□□ -0.07
TOP3A-201ENST00000321105 C14orf37Q86TY3 774 aa14.61□□□□□ -0.07
TOP3A-201ENST00000321105 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
TOP3A-201ENST00000321105 NBR1Q14596 966 aa14.6□□□□□ -0.07
TOP3A-201ENST00000321105 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
TOP3A-201ENST00000321105 ANP32AP39687 249 aaKnown RBP14.6□□□□□ -0.07
TOP3A-201ENST00000321105 TRAK1Q9UPV9 953 aa14.59□□□□□ -0.07
TOP3A-201ENST00000321105 PRKRIP1Q9H875 184 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-201ENST00000321105 WASHC2AQ641Q2 1341 aa14.59□□□□□ -0.07
TOP3A-201ENST00000321105 TIAM1Q13009 1591 aa14.58□□□□□ -0.07
TOP3A-201ENST00000321105 UACAQ9BZF9 1416 aa14.58□□□□□ -0.08
TOP3A-201ENST00000321105 SRPK2P78362 688 aaKnown RBP14.58□□□□□ -0.08
TOP3A-201ENST00000321105 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
TOP3A-201ENST00000321105 U2SURPO15042 1029 aaKnown RBP14.57□□□□□ -0.08
TOP3A-201ENST00000321105 KIF15Q9NS87 1388 aa14.57□□□□□ -0.08
TOP3A-201ENST00000321105 WASHC2CQ9Y4E1 1318 aa14.56□□□□□ -0.08
TOP3A-201ENST00000321105 CCDC184Q52MB2 194 aa14.56□□□□□ -0.08
TOP3A-201ENST00000321105 NUTM2FA1L443 756 aa14.56□□□□□ -0.08
TOP3A-201ENST00000321105 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-201ENST00000321105 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
TOP3A-201ENST00000321105 KANK1Q14678 1352 aa14.55□□□□□ -0.08
TOP3A-201ENST00000321105 CDCA8Q53HL2 280 aa14.55□□□□□ -0.08
TOP3A-201ENST00000321105 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
TOP3A-201ENST00000321105 LAS1LQ9Y4W2 734 aaKnown RBP14.55□□□□□ -0.08
TOP3A-201ENST00000321105 USP47Q96K76 1375 aa14.55□□□□□ -0.08
TOP3A-201ENST00000321105 PLB1Q6P1J6 1458 aa14.55□□□□□ -0.08
TOP3A-201ENST00000321105 PANK3Q9H999 370 aa14.54□□□□□ -0.08
TOP3A-201ENST00000321105 CCDC146Q8IYE0 955 aa14.54□□□□□ -0.08
TOP3A-201ENST00000321105 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
TOP3A-201ENST00000321105 PCF11O94913 1555 aaKnown RBP14.54□□□□□ -0.08
TOP3A-201ENST00000321105 ANKRD50Q9ULJ7 1429 aa14.54□□□□□ -0.08
TOP3A-201ENST00000321105 CCDC144AA2RUR9 1427 aa14.52□□□□□ -0.08
TOP3A-201ENST00000321105 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-201ENST00000321105 RSPH4AQ5TD94 716 aa14.51□□□□□ -0.09
TOP3A-201ENST00000321105 RGS3P49796 1198 aa14.51□□□□□ -0.09
TOP3A-201ENST00000321105 C11orf95C9JLR9 678 aaPredicted RBP14.5□□□□□ -0.09
TOP3A-201ENST00000321105 PPP4R2Q9NY27 417 aa14.5□□□□□ -0.09
TOP3A-201ENST00000321105 NAIPQ13075 1403 aa14.5□□□□□ -0.09
TOP3A-201ENST00000321105 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
TOP3A-201ENST00000321105 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
TOP3A-201ENST00000321105 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
TOP3A-201ENST00000321105 EPRSP07814 1512 aaKnown RBP14.48□□□□□ -0.09
TOP3A-201ENST00000321105 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
TOP3A-201ENST00000321105 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
TOP3A-201ENST00000321105 BIVM-ERCC5R4GMW8 1640 aa14.47□□□□□ -0.09
TOP3A-201ENST00000321105 PTPRKQ15262 1439 aa14.47□□□□□ -0.09
TOP3A-201ENST00000321105 TMEM132EQ6IEE7 984 aa14.47□□□□□ -0.09
TOP3A-201ENST00000321105 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.47□□□□□ -0.09
TOP3A-201ENST00000321105 HFM1A2PYH4 1435 aa14.46□□□□□ -0.09
TOP3A-201ENST00000321105 PLIN1O60240 522 aa14.46□□□□□ -0.1
TOP3A-201ENST00000321105 CFAP53Q96M91 514 aa14.45□□□□□ -0.1
TOP3A-201ENST00000321105 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
TOP3A-201ENST00000321105 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
TOP3A-201ENST00000321105 TSHZ2Q9NRE2 1034 aa14.44□□□□□ -0.1
TOP3A-201ENST00000321105 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
TOP3A-201ENST00000321105 CCDC7Q96M83 1385 aa14.44□□□□□ -0.1
TOP3A-201ENST00000321105 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
TOP3A-201ENST00000321105 RAPGEF3O95398 923 aa14.43□□□□□ -0.1
TOP3A-201ENST00000321105 TROQ12816 1431 aaPredicted RBP14.43□□□□□ -0.1
TOP3A-201ENST00000321105 KIAA0586Q9BVV6 1533 aa14.42□□□□□ -0.1
TOP3A-201ENST00000321105 U2AF1L5P0DN76 240 aaPredicted RBP14.42□□□□□ -0.1
TOP3A-201ENST00000321105 U2AF1Q01081 240 aaKnown RBP eCLIP14.42□□□□□ -0.1
TOP3A-201ENST00000321105 CFAP70Q5T0N1 1121 aa14.42□□□□□ -0.1
TOP3A-201ENST00000321105 NLRP13Q86W25 1043 aa14.42□□□□□ -0.1
TOP3A-201ENST00000321105 ARXQ96QS3 562 aa14.41□□□□□ -0.1
TOP3A-201ENST00000321105 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
TOP3A-201ENST00000321105 FAM69CQ0P6D2 419 aa14.41□□□□□ -0.1
TOP3A-201ENST00000321105 RCAN3Q9UKA8 241 aa14.41□□□□□ -0.1
TOP3A-201ENST00000321105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.4□□□□□ -0.1
TOP3A-201ENST00000321105 RALBP1Q15311 655 aa14.4□□□□□ -0.1
TOP3A-201ENST00000321105 DAPK1P53355 1430 aa14.39□□□□□ -0.11
TOP3A-201ENST00000321105 IQGAP2Q13576 1575 aa14.39□□□□□ -0.11
TOP3A-201ENST00000321105 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
TOP3A-201ENST00000321105 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
TOP3A-201ENST00000321105 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
TOP3A-201ENST00000321105 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms