RNA–Protein interactions for RNA: ENST00000320370.11

SSFA2-201, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSFA2, Length 4,965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-201ENST00000320370 A0A0G2JS52 829 aa21.5■■□□□ 1.03
SSFA2-201ENST00000320370 EFCAB2Q5VUJ9 269 aa21.5■■□□□ 1.03
SSFA2-201ENST00000320370 TRIM44Q96DX7 344 aaPredicted RBP21.5■■□□□ 1.03
SSFA2-201ENST00000320370 CCDC18Q5T9S5 1454 aa21.49■■□□□ 1.03
SSFA2-201ENST00000320370 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
SSFA2-201ENST00000320370 CHMP4BQ9H444 224 aaKnown RBP21.48■■□□□ 1.03
SSFA2-201ENST00000320370 RCAN3Q9UKA8 241 aa21.48■■□□□ 1.03
SSFA2-201ENST00000320370 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
SSFA2-201ENST00000320370 CASC1Q6TDU7 716 aa21.44■■□□□ 1.02
SSFA2-201ENST00000320370 TCERG1O14776 1098 aaKnown RBP21.43■■□□□ 1.02
SSFA2-201ENST00000320370 NCLP19338 710 aaKnown RBP21.43■■□□□ 1.02
SSFA2-201ENST00000320370 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
SSFA2-201ENST00000320370 PNNQ9H307 717 aaKnown RBP21.43■■□□□ 1.02
SSFA2-201ENST00000320370 RSPH4AQ5TD94 716 aa21.42■■□□□ 1.02
SSFA2-201ENST00000320370 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
SSFA2-201ENST00000320370 DEKP35659 375 aaKnown RBP21.4■■□□□ 1.02
SSFA2-201ENST00000320370 KIF21BO75037 1637 aa21.4■■□□□ 1.02
SSFA2-201ENST00000320370 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
SSFA2-201ENST00000320370 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
SSFA2-201ENST00000320370 IGF1RP08069 1367 aa21.38■■□□□ 1.01
SSFA2-201ENST00000320370 NLRP13Q86W25 1043 aa21.37■■□□□ 1.01
SSFA2-201ENST00000320370 PDE3BQ13370 1112 aa21.37■■□□□ 1.01
SSFA2-201ENST00000320370 GGT6Q6P531 493 aa21.36■■□□□ 1.01
SSFA2-201ENST00000320370 HDGFP51858 240 aaKnown RBP21.34■■□□□ 1.01
SSFA2-201ENST00000320370 PRKRIP1Q9H875 184 aaPredicted RBP21.33■■□□□ 1
SSFA2-201ENST00000320370 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 1
SSFA2-201ENST00000320370 KIF15Q9NS87 1388 aa21.31■■□□□ 1
SSFA2-201ENST00000320370 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
SSFA2-201ENST00000320370 SAFB2Q14151 953 aaKnown RBP eCLIP21.31■■□□□ 1
SSFA2-201ENST00000320370 LMOD2Q6P5Q4 547 aa21.3■■□□□ 1
SSFA2-201ENST00000320370 PHLDB1Q86UU1 1377 aa21.3■■□□□ 1
SSFA2-201ENST00000320370 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
SSFA2-201ENST00000320370 HAP1P54257 671 aaPredicted RBP21.29■■□□□ 1
SSFA2-201ENST00000320370 SRPK2P78362 688 aaKnown RBP21.29■■□□□ 1
SSFA2-201ENST00000320370 IPO9Q96P70 1041 aaKnown RBP21.28■■□□□ 1
SSFA2-201ENST00000320370 ZBED9Q6R2W3 1325 aa21.28■■□□□ 1
SSFA2-201ENST00000320370 MLECQ14165 292 aa21.28■■□□□ 1
SSFA2-201ENST00000320370 EIF3AQ14152 1382 aaKnown RBP21.28■■□□□ 1
SSFA2-201ENST00000320370 HSCBQ8IWL3 235 aa21.27■■□□□ 1
SSFA2-201ENST00000320370 MYBBP1AQ9BQG0 1328 aaKnown RBP21.27■■□□□ 1
SSFA2-201ENST00000320370 RTN4Q9NQC3 1192 aaKnown RBP21.26■□□□□ 0.99
SSFA2-201ENST00000320370 SPAG9O60271 1321 aaKnown RBP21.25■□□□□ 0.99
SSFA2-201ENST00000320370 FGD6Q6ZV73 1430 aa21.25■□□□□ 0.99
SSFA2-201ENST00000320370 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
SSFA2-201ENST00000320370 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
SSFA2-201ENST00000320370 GOLGA2Q08379 1002 aa21.24■□□□□ 0.99
SSFA2-201ENST00000320370 KIF3BO15066 747 aa21.24■□□□□ 0.99
SSFA2-201ENST00000320370 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
SSFA2-201ENST00000320370 PTMAP06454 111 aaKnown RBP21.22■□□□□ 0.99
SSFA2-201ENST00000320370 L1TD1Q5T7N2 865 aaKnown RBP21.22■□□□□ 0.99
SSFA2-201ENST00000320370 ST20-MTHFSA0A0A6YYL1 179 aa21.22■□□□□ 0.99
SSFA2-201ENST00000320370 PTPRGP23470 1445 aa21.21■□□□□ 0.99
SSFA2-201ENST00000320370 UACAQ9BZF9 1416 aa21.21■□□□□ 0.99
SSFA2-201ENST00000320370 SOX12O15370 315 aa21.21■□□□□ 0.99
SSFA2-201ENST00000320370 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
SSFA2-201ENST00000320370 RWDD1Q9H446 243 aaPredicted RBP21.2■□□□□ 0.99
SSFA2-201ENST00000320370 STK26Q9P289 416 aa21.2■□□□□ 0.98
SSFA2-201ENST00000320370 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.98
SSFA2-201ENST00000320370 CUX1P39880 1505 aa21.2■□□□□ 0.98
SSFA2-201ENST00000320370 MYOM3Q5VTT5 1437 aa21.2■□□□□ 0.98
SSFA2-201ENST00000320370 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
SSFA2-201ENST00000320370 USP47Q96K76 1375 aa21.19■□□□□ 0.98
SSFA2-201ENST00000320370 U2AF1L5P0DN76 240 aaPredicted RBP21.18■□□□□ 0.98
SSFA2-201ENST00000320370 U2AF1Q01081 240 aaKnown RBP eCLIP21.18■□□□□ 0.98
SSFA2-201ENST00000320370 CFTRP13569 1480 aa21.17■□□□□ 0.98
SSFA2-201ENST00000320370 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
SSFA2-201ENST00000320370 HDGFL2Q7Z4V5 671 aaPredicted RBP21.16■□□□□ 0.98
SSFA2-201ENST00000320370 PMFBP1Q8TBY8 1022 aa21.16■□□□□ 0.98
SSFA2-201ENST00000320370 TPRNQ4KMQ1 711 aa21.16■□□□□ 0.98
SSFA2-201ENST00000320370 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
SSFA2-201ENST00000320370 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
SSFA2-201ENST00000320370 NAP1L5Q96NT1 182 aaPredicted RBP21.15■□□□□ 0.98
SSFA2-201ENST00000320370 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
SSFA2-201ENST00000320370 CALD1Q05682 793 aaKnown RBP21.13■□□□□ 0.97
SSFA2-201ENST00000320370 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
SSFA2-201ENST00000320370 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
SSFA2-201ENST00000320370 PANK3Q9H999 370 aa21.1■□□□□ 0.97
SSFA2-201ENST00000320370 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
SSFA2-201ENST00000320370 RRP1P56182 461 aaKnown RBP21.1■□□□□ 0.97
SSFA2-201ENST00000320370 OS9Q13438 667 aaPredicted RBP21.1■□□□□ 0.97
SSFA2-201ENST00000320370 CENPJQ9HC77 1338 aaPredicted RBP21.1■□□□□ 0.97
SSFA2-201ENST00000320370 DNTTIP2Q5QJE6 756 aaKnown RBP21.08■□□□□ 0.97
SSFA2-201ENST00000320370 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.97
SSFA2-201ENST00000320370 SPRYD3Q8NCJ5 442 aa21.08■□□□□ 0.96
SSFA2-201ENST00000320370 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.96
SSFA2-201ENST00000320370 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
SSFA2-201ENST00000320370 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
SSFA2-201ENST00000320370 ZRSR1Q15695 479 aaKnown RBP21.07■□□□□ 0.96
SSFA2-201ENST00000320370 PRXQ9BXM0 1461 aa21.07■□□□□ 0.96
SSFA2-201ENST00000320370 HMGXB3Q12766 1538 aa21.06■□□□□ 0.96
SSFA2-201ENST00000320370 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
SSFA2-201ENST00000320370 MCCP23508 829 aa21.05■□□□□ 0.96
SSFA2-201ENST00000320370 CENPQQ7L2Z9 268 aaPredicted RBP21.05■□□□□ 0.96
SSFA2-201ENST00000320370 SLKQ9H2G2 1235 aaPredicted RBP21.04■□□□□ 0.96
SSFA2-201ENST00000320370 NCOA2Q15596 1464 aa21.04■□□□□ 0.96
SSFA2-201ENST00000320370 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
SSFA2-201ENST00000320370 PTMSP20962 102 aa21.04■□□□□ 0.96
SSFA2-201ENST00000320370 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.961e-7■■■□□ 15.2
SSFA2-201ENST00000320370 PDE4AP27815 886 aa21.04■□□□□ 0.96
SSFA2-201ENST00000320370 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms