RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
FARP1-201ENST00000319562 CALRP27797 417 aaKnown RBP15.28■□□□□ 0.04
FARP1-201ENST00000319562 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
FARP1-201ENST00000319562 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
FARP1-201ENST00000319562 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
FARP1-201ENST00000319562 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
FARP1-201ENST00000319562 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
FARP1-201ENST00000319562 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
FARP1-201ENST00000319562 TPM3P06753 285 aa15.25■□□□□ 0.03
FARP1-201ENST00000319562 TMF1P82094 1093 aa15.25■□□□□ 0.03
FARP1-201ENST00000319562 GOLGA3Q08378 1498 aa15.25■□□□□ 0.03
FARP1-201ENST00000319562 CEP89Q96ST8 783 aa15.24■□□□□ 0.03
FARP1-201ENST00000319562 RWDD1Q9H446 243 aaPredicted RBP15.24■□□□□ 0.03
FARP1-201ENST00000319562 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
FARP1-201ENST00000319562 LMOD2Q6P5Q4 547 aa15.23■□□□□ 0.03
FARP1-201ENST00000319562 RTF1Q92541 710 aaKnown RBP15.23■□□□□ 0.03
FARP1-201ENST00000319562 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
FARP1-201ENST00000319562 GPS2Q13227 327 aa15.22■□□□□ 0.03
FARP1-201ENST00000319562 EEA1Q15075 1411 aa15.22■□□□□ 0.03
FARP1-201ENST00000319562 SLKQ9H2G2 1235 aaPredicted RBP15.22■□□□□ 0.03
FARP1-201ENST00000319562 CHMP4AQ9BY43 222 aa15.2■□□□□ 0.02
FARP1-201ENST00000319562 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
FARP1-201ENST00000319562 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
FARP1-201ENST00000319562 CCDC70Q6NSX1 233 aa15.18■□□□□ 0.02
FARP1-201ENST00000319562 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
FARP1-201ENST00000319562 HSP90B1P14625 803 aaKnown RBP15.18■□□□□ 0.02
FARP1-201ENST00000319562 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
FARP1-201ENST00000319562 CEP162Q5TB80 1403 aa15.17■□□□□ 0.02
FARP1-201ENST00000319562 TSR1Q2NL82 804 aaKnown RBP15.17■□□□□ 0.02
FARP1-201ENST00000319562 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
FARP1-201ENST00000319562 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
FARP1-201ENST00000319562 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
FARP1-201ENST00000319562 MORC1Q86VD1 984 aa15.15■□□□□ 0.02
FARP1-201ENST00000319562 RASSF8Q8NHQ8 419 aa15.15■□□□□ 0.02
FARP1-201ENST00000319562 RCAN3Q9UKA8 241 aa15.15■□□□□ 0.02
FARP1-201ENST00000319562 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
FARP1-201ENST00000319562 APBB1O00213 710 aa15.14■□□□□ 0.01
FARP1-201ENST00000319562 ST18O60284 1047 aa15.14■□□□□ 0.01
FARP1-201ENST00000319562 ITPRIPQ8IWB1 547 aa15.13■□□□□ 0.01
FARP1-201ENST00000319562 TIMELESSQ9UNS1 1208 aa15.12■□□□□ 0.01
FARP1-201ENST00000319562 HDGFP51858 240 aaKnown RBP15.12■□□□□ 0.01
FARP1-201ENST00000319562 TEX35Q5T0J7 233 aa15.12■□□□□ 0.01
FARP1-201ENST00000319562 CREBRFQ8IUR6 639 aa15.12■□□□□ 0.01
FARP1-201ENST00000319562 KANK1Q14678 1352 aa15.11■□□□□ 0.01
FARP1-201ENST00000319562 TPM1P09493 284 aa15.11■□□□□ 0.01
FARP1-201ENST00000319562 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
FARP1-201ENST00000319562 ZNF771Q7L3S4 317 aaPredicted RBP15.11■□□□□ 0.01
FARP1-201ENST00000319562 HMMRO75330 724 aa15.11■□□□□ 0.01
FARP1-201ENST00000319562 GOLGA6L19H0YKK7 550 aa15.11■□□□□ 0.01
FARP1-201ENST00000319562 TRIM6-TRIM34B2RNG4 842 aa15.1■□□□□ 0.01
FARP1-201ENST00000319562 PDE4CQ08493 712 aa15.1■□□□□ 0.01
FARP1-201ENST00000319562 MFAP1P55081 439 aaKnown RBP15.1■□□□□ 0.01
FARP1-201ENST00000319562 CHMP4CQ96CF2 233 aa15.1■□□□□ 0.01
FARP1-201ENST00000319562 GORABQ5T7V8 394 aa15.1■□□□□ 0.01
FARP1-201ENST00000319562 SRPK2P78362 688 aaKnown RBP15.1■□□□□ 0.01
FARP1-201ENST00000319562 SKOR2Q2VWA4 1001 aaPredicted RBP15.1■□□□□ 0.01
FARP1-201ENST00000319562 TMX4Q9H1E5 349 aaPredicted RBP15.1■□□□□ 0.01
FARP1-201ENST00000319562 TPD52L1Q16890 204 aaPredicted RBP15.09■□□□□ 0.01
FARP1-201ENST00000319562 TPM2P07951 284 aa15.09■□□□□ 0.01
FARP1-201ENST00000319562 SF3A1Q15459 793 aaKnown RBP15.09■□□□□ 0.01
FARP1-201ENST00000319562 RRP12Q5JTH9 1297 aaKnown RBP15.08■□□□□ 0
FARP1-201ENST00000319562 ATP6V1DQ9Y5K8 247 aa15.08■□□□□ 0
FARP1-201ENST00000319562 DCAF11Q8TEB1 546 aa15.07■□□□□ 0
FARP1-201ENST00000319562 VSIG10Q8N0Z9 540 aa15.07■□□□□ 0
FARP1-201ENST00000319562 CCAR2Q8N163 923 aaKnown RBP15.06■□□□□ 0
FARP1-201ENST00000319562 RALBP1Q15311 655 aa15.06■□□□□ 0
FARP1-201ENST00000319562 SPAG9O60271 1321 aaKnown RBP15.05■□□□□ 0
FARP1-201ENST00000319562 NOM1Q5C9Z4 860 aaKnown RBP15.05■□□□□ 0
FARP1-201ENST00000319562 PES1O00541 588 aaKnown RBP15.05■□□□□ -0
FARP1-201ENST00000319562 SIN3AQ96ST3 1273 aa15.05■□□□□ -0
FARP1-201ENST00000319562 STK31Q9BXU1 1019 aa15.04■□□□□ -0
FARP1-201ENST00000319562 HDGFL2Q7Z4V5 671 aaPredicted RBP15.04■□□□□ -0
FARP1-201ENST00000319562 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
FARP1-201ENST00000319562 TAF7LQ5H9L4 462 aa15.03■□□□□ -0
FARP1-201ENST00000319562 BECN2A8MW95 431 aa15.03■□□□□ -0
FARP1-201ENST00000319562 H3BQV1 296 aa15.03■□□□□ -0
FARP1-201ENST00000319562 IFFO2Q5TF58 517 aa15.03■□□□□ -0
FARP1-201ENST00000319562 PATL2C9JE40 543 aaKnown RBP15.02□□□□□ -0.01
FARP1-201ENST00000319562 MARCH6O60337 910 aa15.01□□□□□ -0.01
FARP1-201ENST00000319562 IPO7O95373 1038 aaKnown RBP15.01□□□□□ -0.01
FARP1-201ENST00000319562 SOX12O15370 315 aa15□□□□□ -0.01
FARP1-201ENST00000319562 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
FARP1-201ENST00000319562 GSE1Q14687 1217 aa15□□□□□ -0.01
FARP1-201ENST00000319562 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
FARP1-201ENST00000319562 CHMP3Q9Y3E7 222 aa14.99□□□□□ -0.01
FARP1-201ENST00000319562 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
FARP1-201ENST00000319562 U2AF1L5P0DN76 240 aaPredicted RBP14.99□□□□□ -0.01
FARP1-201ENST00000319562 U2AF1Q01081 240 aaKnown RBP eCLIP14.99□□□□□ -0.018e-12■□□□□ 10.7
FARP1-201ENST00000319562 DDX49Q9Y6V7 483 aaKnown RBP14.99□□□□□ -0.01
FARP1-201ENST00000319562 CDR1P51861 262 aa14.99□□□□□ -0.01
FARP1-201ENST00000319562 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
FARP1-201ENST00000319562 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
FARP1-201ENST00000319562 ANKRD20A12PQ8NF67 263 aa14.97□□□□□ -0.01
FARP1-201ENST00000319562 AK7Q96M32 723 aa14.97□□□□□ -0.01
FARP1-201ENST00000319562 PHLDB1Q86UU1 1377 aa14.97□□□□□ -0.01
FARP1-201ENST00000319562 TNIKQ9UKE5 1360 aa14.97□□□□□ -0.01
FARP1-201ENST00000319562 ACBD3Q9H3P7 528 aa14.97□□□□□ -0.01
FARP1-201ENST00000319562 VPS53Q5VIR6 699 aa14.96□□□□□ -0.01
FARP1-201ENST00000319562 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
FARP1-201ENST00000319562 HOOK1Q9UJC3 728 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms