RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 ANP32CO43423 234 aa29.26■■■□□ 2.27
CPNE7-202ENST00000319518 TROQ12816 1431 aaPredicted RBP29.26■■■□□ 2.27
CPNE7-202ENST00000319518 KDM6BO15054 1643 aa29.25■■■□□ 2.27
CPNE7-202ENST00000319518 BCANQ96GW7 911 aa29.24■■■□□ 2.27
CPNE7-202ENST00000319518 CHD1O14646 1710 aa29.23■■■□□ 2.27
CPNE7-202ENST00000319518 FKBP8Q14318 412 aa29.23■■■□□ 2.27
CPNE7-202ENST00000319518 KIF14Q15058 1648 aa29.22■■■□□ 2.27
CPNE7-202ENST00000319518 TRIM52Q96A61 297 aa29.21■■■□□ 2.27
CPNE7-202ENST00000319518 GCC2Q8IWJ2 1684 aa29.19■■■□□ 2.26
CPNE7-202ENST00000319518 DENND4BO75064 1496 aaPredicted RBP29.19■■■□□ 2.26
CPNE7-202ENST00000319518 DAPK1P53355 1430 aa29.19■■■□□ 2.26
CPNE7-202ENST00000319518 ABCA8O94911 1581 aa29.19■■■□□ 2.26
CPNE7-202ENST00000319518 ABCC5O15440 1437 aa29.17■■■□□ 2.26
CPNE7-202ENST00000319518 ZNF777Q9ULD5 760 aaPredicted RBP29.15■■■□□ 2.26
CPNE7-202ENST00000319518 CFDP1Q9UEE9 299 aaPredicted RBP29.14■■■□□ 2.26
CPNE7-202ENST00000319518 ATP10BO94823 1461 aa29.14■■■□□ 2.26
CPNE7-202ENST00000319518 GPATCH8Q9UKJ3 1502 aaKnown RBP29.13■■■□□ 2.25
CPNE7-202ENST00000319518 AKNAQ7Z591 1439 aa29.12■■■□□ 2.25
CPNE7-202ENST00000319518 DNMT1P26358 1616 aaKnown RBP29.12■■■□□ 2.25
CPNE7-202ENST00000319518 PTPRGP23470 1445 aa29.11■■■□□ 2.25
CPNE7-202ENST00000319518 PLEKHD1A6NEE1 506 aa29.1■■■□□ 2.25
CPNE7-202ENST00000319518 CAMSAP2Q08AD1 1489 aa29.09■■■□□ 2.25
CPNE7-202ENST00000319518 ADCY10Q96PN6 1610 aa29.08■■■□□ 2.25
CPNE7-202ENST00000319518 FOXD1Q16676 465 aa29.04■■■□□ 2.24
CPNE7-202ENST00000319518 ITSN2Q9NZM3 1697 aa29.04■■■□□ 2.24
CPNE7-202ENST00000319518 ROCK1Q13464 1354 aa29.02■■■□□ 2.24
CPNE7-202ENST00000319518 MPHOSPH9Q99550 1183 aa29.02■■■□□ 2.24
CPNE7-202ENST00000319518 ERCC6L2Q5T890 1561 aa29.02■■■□□ 2.24
CPNE7-202ENST00000319518 WASHC2AQ641Q2 1341 aa29.01■■■□□ 2.23
CPNE7-202ENST00000319518 HSPA5P11021 654 aaKnown RBP29■■■□□ 2.23
CPNE7-202ENST00000319518 ABCC10Q5T3U5 1492 aa28.97■■■□□ 2.23
CPNE7-202ENST00000319518 NEFLP07196 543 aa28.96■■■□□ 2.23
CPNE7-202ENST00000319518 CDC42BPAQ5VT25 1732 aa28.96■■■□□ 2.23
CPNE7-202ENST00000319518 SHROOM2Q13796 1616 aa28.95■■■□□ 2.23
CPNE7-202ENST00000319518 NCOA1Q15788 1441 aa28.9■■■□□ 2.22
CPNE7-202ENST00000319518 L3MBTL2Q969R5 705 aa28.89■■■□□ 2.21
CPNE7-202ENST00000319518 CROCC2H7BZ55 1655 aa28.86■■■□□ 2.21
CPNE7-202ENST00000319518 EIF4G2P78344 907 aaKnown RBP eCLIP28.85■■■□□ 2.215e-6■■□□□ 11.4
CPNE7-202ENST00000319518 HNRNPUQ00839 825 aaKnown RBP eCLIP28.85■■■□□ 2.21
CPNE7-202ENST00000319518 SLC4A1APQ9BWU0 796 aaKnown RBP28.84■■■□□ 2.21
CPNE7-202ENST00000319518 ADGBQ8N7X0 1667 aa28.84■■■□□ 2.21
CPNE7-202ENST00000319518 C11orf95C9JLR9 678 aaPredicted RBP28.83■■■□□ 2.21
CPNE7-202ENST00000319518 HNRNPMP52272 730 aaKnown RBP eCLIP28.83■■■□□ 2.216e-12■■□□□ 12.6
CPNE7-202ENST00000319518 ANKRD30BQ9BXX2 1392 aa28.8■■■□□ 2.2
CPNE7-202ENST00000319518 ADGRL2O95490 1459 aa28.8■■■□□ 2.2
CPNE7-202ENST00000319518 CNTLNQ9NXG0 1405 aa28.8■■■□□ 2.2
CPNE7-202ENST00000319518 CCDC184Q52MB2 194 aa28.79■■■□□ 2.2
CPNE7-202ENST00000319518 ANP32EQ9BTT0 268 aa28.79■■■□□ 2.2
CPNE7-202ENST00000319518 ANKRD30AQ9BXX3 1397 aa28.78■■■□□ 2.2
CPNE7-202ENST00000319518 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
CPNE7-202ENST00000319518 NBPF8Q3BBV2 869 aa28.77■■■□□ 2.2
CPNE7-202ENST00000319518 RPRD2Q5VT52 1461 aaKnown RBP28.77■■■□□ 2.2
CPNE7-202ENST00000319518 RBM19Q9Y4C8 960 aaKnown RBP28.77■■■□□ 2.2
CPNE7-202ENST00000319518 PZPP20742 1482 aa28.76■■■□□ 2.2
CPNE7-202ENST00000319518 TEX14Q8IWB6 1497 aa28.76■■■□□ 2.2
CPNE7-202ENST00000319518 C9orf84Q5VXU9 1444 aa28.76■■■□□ 2.19
CPNE7-202ENST00000319518 ABCC2Q92887 1545 aa28.75■■■□□ 2.19
CPNE7-202ENST00000319518 CCDC7Q96M83 1385 aa28.74■■■□□ 2.19
CPNE7-202ENST00000319518 CDC42BPBQ9Y5S2 1711 aa28.73■■■□□ 2.19
CPNE7-202ENST00000319518 ANKRD50Q9ULJ7 1429 aa28.72■■■□□ 2.19
CPNE7-202ENST00000319518 TTC37Q6PGP7 1564 aa28.71■■■□□ 2.19
CPNE7-202ENST00000319518 SAMD9LQ8IVG5 1584 aa28.71■■■□□ 2.19
CPNE7-202ENST00000319518 TSPY4P0CV99 314 aa28.71■■■□□ 2.19
CPNE7-202ENST00000319518 TSPY10P0CW01 314 aa28.71■■■□□ 2.19
CPNE7-202ENST00000319518 PREX2Q70Z35 1606 aa28.69■■■□□ 2.18
CPNE7-202ENST00000319518 MBD5Q9P267 1494 aa28.69■■■□□ 2.18
CPNE7-202ENST00000319518 PRKRIP1Q9H875 184 aaPredicted RBP28.68■■■□□ 2.18
CPNE7-202ENST00000319518 SPATA31E1Q6ZUB1 1445 aa28.68■■■□□ 2.18
CPNE7-202ENST00000319518 IRX6P78412 446 aaPredicted RBP28.68■■■□□ 2.18
CPNE7-202ENST00000319518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.67■■■□□ 2.189e-7■■■□□ 15.6
CPNE7-202ENST00000319518 SHANK2Q9UPX8 1470 aa28.67■■■□□ 2.18
CPNE7-202ENST00000319518 PKD2Q13563 968 aa28.64■■■□□ 2.18
CPNE7-202ENST00000319518 ARHGAP5Q13017 1502 aa28.63■■■□□ 2.17
CPNE7-202ENST00000319518 KIF15Q9NS87 1388 aa28.62■■■□□ 2.17
CPNE7-202ENST00000319518 ARHGEF5Q12774 1597 aa28.61■■■□□ 2.17
CPNE7-202ENST00000319518 ZCCHC11Q5TAX3 1644 aaKnown RBP28.6■■■□□ 2.17
CPNE7-202ENST00000319518 KIF7Q2M1P5 1343 aa28.6■■■□□ 2.17
CPNE7-202ENST00000319518 SYCP2Q9BX26 1530 aa28.6■■■□□ 2.17
CPNE7-202ENST00000319518 NUP155O75694 1391 aa28.6■■■□□ 2.17
CPNE7-202ENST00000319518 CCDC141Q6ZP82 1450 aa28.59■■■□□ 2.17
CPNE7-202ENST00000319518 KIAA1107Q9UPP5 1409 aa28.58■■■□□ 2.17
CPNE7-202ENST00000319518 POLR1AO95602 1720 aaPredicted RBP28.56■■■□□ 2.16
CPNE7-202ENST00000319518 FAM9BQ8IZU0 186 aa28.54■■■□□ 2.16
CPNE7-202ENST00000319518 MRS2Q9HD23 443 aa28.53■■■□□ 2.16
CPNE7-202ENST00000319518 MYO5CQ9NQX4 1742 aa28.52■■■□□ 2.16
CPNE7-202ENST00000319518 UHRF1BP1LA0JNW5 1464 aa28.51■■■□□ 2.15
CPNE7-202ENST00000319518 ZBED9Q6R2W3 1325 aa28.47■■■□□ 2.15
CPNE7-202ENST00000319518 ARHGEF12Q9NZN5 1544 aa28.47■■■□□ 2.15
CPNE7-202ENST00000319518 RSPH4AQ5TD94 716 aa28.47■■■□□ 2.15
CPNE7-202ENST00000319518 MSH5O43196 834 aa28.44■■■□□ 2.14
CPNE7-202ENST00000319518 ZNF326Q5BKZ1 582 aaKnown RBP28.44■■■□□ 2.14
CPNE7-202ENST00000319518 ERICH6BQ5W0A0 696 aa28.43■■■□□ 2.14
CPNE7-202ENST00000319518 PLCH2O75038 1416 aa28.42■■■□□ 2.14
CPNE7-202ENST00000319518 BCORL1Q5H9F3 1711 aa28.42■■■□□ 2.14
CPNE7-202ENST00000319518 DHX29Q7Z478 1369 aaKnown RBP28.42■■■□□ 2.14
CPNE7-202ENST00000319518 KDM5DQ9BY66 1539 aa28.41■■■□□ 2.14
CPNE7-202ENST00000319518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.148e-9■□□□□ 9.1
CPNE7-202ENST00000319518 PPP4R2Q9NY27 417 aa28.39■■■□□ 2.14
CPNE7-202ENST00000319518 EFCAB2Q5VUJ9 269 aa28.38■■■□□ 2.13
CPNE7-202ENST00000319518 USP47Q96K76 1375 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms