RNA–Protein interactions for RNA: ENST00000318887.7

C3orf38-201, Transcript of chromosome 3 open reading frame 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf38, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-201ENST00000318887 FHOD3Q2V2M9 1422 aa17.44■□□□□ 0.38
C3orf38-201ENST00000318887 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
C3orf38-201ENST00000318887 GSE1Q14687 1217 aa17.41■□□□□ 0.38
C3orf38-201ENST00000318887 ARHGAP35Q9NRY4 1499 aa17.41■□□□□ 0.38
C3orf38-201ENST00000318887 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
C3orf38-201ENST00000318887 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
C3orf38-201ENST00000318887 DISP1Q96F81 1524 aa17.4■□□□□ 0.38
C3orf38-201ENST00000318887 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
C3orf38-201ENST00000318887 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
C3orf38-201ENST00000318887 TONSLQ96HA7 1378 aa17.35■□□□□ 0.37
C3orf38-201ENST00000318887 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
C3orf38-201ENST00000318887 KIAA0556O60303 1618 aa17.34■□□□□ 0.37
C3orf38-201ENST00000318887 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
C3orf38-201ENST00000318887 ARHGEF11O15085 1522 aa17.33■□□□□ 0.36
C3orf38-201ENST00000318887 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
C3orf38-201ENST00000318887 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
C3orf38-201ENST00000318887 RNF123Q5XPI4 1314 aa17.32■□□□□ 0.36
C3orf38-201ENST00000318887 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
C3orf38-201ENST00000318887 SAMD9Q5K651 1589 aa17.31■□□□□ 0.36
C3orf38-201ENST00000318887 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
C3orf38-201ENST00000318887 PTPRGP23470 1445 aa17.28■□□□□ 0.36
C3orf38-201ENST00000318887 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
C3orf38-201ENST00000318887 RIMBP3CA6NJZ7 1639 aa17.28■□□□□ 0.36
C3orf38-201ENST00000318887 RIMBP3BA6NNM3 1639 aa17.28■□□□□ 0.36
C3orf38-201ENST00000318887 RIMBP3Q9UFD9 1639 aa17.28■□□□□ 0.36
C3orf38-201ENST00000318887 PLB1Q6P1J6 1458 aa17.27■□□□□ 0.35
C3orf38-201ENST00000318887 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.35
C3orf38-201ENST00000318887 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
C3orf38-201ENST00000318887 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
C3orf38-201ENST00000318887 CNTLNQ9NXG0 1405 aa17.26■□□□□ 0.35
C3orf38-201ENST00000318887 MRS2Q9HD23 443 aa17.25■□□□□ 0.35
C3orf38-201ENST00000318887 NCOA2Q15596 1464 aa17.25■□□□□ 0.35
C3orf38-201ENST00000318887 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
C3orf38-201ENST00000318887 AKNAQ7Z591 1439 aa17.25■□□□□ 0.35
C3orf38-201ENST00000318887 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
C3orf38-201ENST00000318887 FRAT1Q92837 279 aaPredicted RBP17.25■□□□□ 0.35
C3orf38-201ENST00000318887 ZMYND15Q9H091 742 aa17.25■□□□□ 0.35
C3orf38-201ENST00000318887 NUDCQ9Y266 331 aa17.24■□□□□ 0.35
C3orf38-201ENST00000318887 MS4A1P11836 297 aa17.23■□□□□ 0.35
C3orf38-201ENST00000318887 PDE4AP27815 886 aa17.23■□□□□ 0.35
C3orf38-201ENST00000318887 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
C3orf38-201ENST00000318887 NFKBIBQ15653 356 aa17.22■□□□□ 0.35
C3orf38-201ENST00000318887 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
C3orf38-201ENST00000318887 BACH2Q9BYV9 841 aa17.21■□□□□ 0.35
C3orf38-201ENST00000318887 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
C3orf38-201ENST00000318887 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
C3orf38-201ENST00000318887 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
C3orf38-201ENST00000318887 FMN1Q68DA7 1419 aa17.17■□□□□ 0.34
C3orf38-201ENST00000318887 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
C3orf38-201ENST00000318887 HSPA5P11021 654 aaKnown RBP17.15■□□□□ 0.34
C3orf38-201ENST00000318887 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
C3orf38-201ENST00000318887 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
C3orf38-201ENST00000318887 CDK13Q14004 1512 aaKnown RBP17.13■□□□□ 0.33
C3orf38-201ENST00000318887 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
C3orf38-201ENST00000318887 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
C3orf38-201ENST00000318887 RAPGEF6Q8TEU7 1601 aa17.11■□□□□ 0.33
C3orf38-201ENST00000318887 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
C3orf38-201ENST00000318887 RRP9O43818 475 aaKnown RBP17.1■□□□□ 0.33
C3orf38-201ENST00000318887 KDM5BQ9UGL1 1544 aa17.1■□□□□ 0.33
C3orf38-201ENST00000318887 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
C3orf38-201ENST00000318887 ABCA8O94911 1581 aa17.09■□□□□ 0.33
C3orf38-201ENST00000318887 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
C3orf38-201ENST00000318887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.33
C3orf38-201ENST00000318887 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
C3orf38-201ENST00000318887 LRRIQ1Q96JM4 1722 aa17.08■□□□□ 0.33
C3orf38-201ENST00000318887 HSP90AA2PQ14568 343 aaPredicted RBP17.08■□□□□ 0.32
C3orf38-201ENST00000318887 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
C3orf38-201ENST00000318887 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
C3orf38-201ENST00000318887 NCOA1Q15788 1441 aa17.06■□□□□ 0.32
C3orf38-201ENST00000318887 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
C3orf38-201ENST00000318887 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
C3orf38-201ENST00000318887 EPRSP07814 1512 aaKnown RBP17.05■□□□□ 0.32
C3orf38-201ENST00000318887 ATP10BO94823 1461 aa17.05■□□□□ 0.32
C3orf38-201ENST00000318887 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
C3orf38-201ENST00000318887 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
C3orf38-201ENST00000318887 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
C3orf38-201ENST00000318887 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
C3orf38-201ENST00000318887 HECW1Q76N89 1606 aa17.03■□□□□ 0.32
C3orf38-201ENST00000318887 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.32
C3orf38-201ENST00000318887 RRAGDQ9NQL2 400 aaPredicted RBP17.01■□□□□ 0.31
C3orf38-201ENST00000318887 RRP1P56182 461 aaKnown RBP17■□□□□ 0.31
C3orf38-201ENST00000318887 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
C3orf38-201ENST00000318887 ZCCHC11Q5TAX3 1644 aaKnown RBP16.99■□□□□ 0.31
C3orf38-201ENST00000318887 MAGI3Q5TCQ9 1506 aa16.98■□□□□ 0.31
C3orf38-201ENST00000318887 L1TD1Q5T7N2 865 aaKnown RBP16.98■□□□□ 0.31
C3orf38-201ENST00000318887 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
C3orf38-201ENST00000318887 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
C3orf38-201ENST00000318887 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
C3orf38-201ENST00000318887 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
C3orf38-201ENST00000318887 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
C3orf38-201ENST00000318887 MTUS2Q5JR59 1369 aa16.96■□□□□ 0.31
C3orf38-201ENST00000318887 PLEKHD1A6NEE1 506 aa16.96■□□□□ 0.31
C3orf38-201ENST00000318887 PNNQ9H307 717 aaKnown RBP16.96■□□□□ 0.3
C3orf38-201ENST00000318887 SLC4A3P48751 1232 aa16.94■□□□□ 0.3
C3orf38-201ENST00000318887 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
C3orf38-201ENST00000318887 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
C3orf38-201ENST00000318887 CLCN1P35523 988 aa16.91■□□□□ 0.3
C3orf38-201ENST00000318887 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.29
C3orf38-201ENST00000318887 POLR1AO95602 1720 aaPredicted RBP16.89■□□□□ 0.29
C3orf38-201ENST00000318887 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms