RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 ZRSR1Q15695 479 aaKnown RBP17.84■□□□□ 0.45
EDEM3-201ENST00000318130 CHMP3Q9Y3E7 222 aa17.84■□□□□ 0.45
EDEM3-201ENST00000318130 G3V3G9 751 aa17.84■□□□□ 0.45
EDEM3-201ENST00000318130 DCAF8Q5TAQ9 597 aa17.84■□□□□ 0.45
EDEM3-201ENST00000318130 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.45
EDEM3-201ENST00000318130 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
EDEM3-201ENST00000318130 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.44
EDEM3-201ENST00000318130 CASC1Q6TDU7 716 aa17.83■□□□□ 0.44
EDEM3-201ENST00000318130 FGD1P98174 961 aa17.81■□□□□ 0.44
EDEM3-201ENST00000318130 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
EDEM3-201ENST00000318130 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
EDEM3-201ENST00000318130 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
EDEM3-201ENST00000318130 KCNJ4P48050 445 aa17.79■□□□□ 0.44
EDEM3-201ENST00000318130 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
EDEM3-201ENST00000318130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.44
EDEM3-201ENST00000318130 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
EDEM3-201ENST00000318130 NACADO15069 1562 aa17.77■□□□□ 0.44
EDEM3-201ENST00000318130 KIF3BO15066 747 aa17.77■□□□□ 0.44
EDEM3-201ENST00000318130 TMX4Q9H1E5 349 aaPredicted RBP17.77■□□□□ 0.44
EDEM3-201ENST00000318130 EVA1CP58658 441 aa17.76■□□□□ 0.43
EDEM3-201ENST00000318130 L1TD1Q5T7N2 865 aaKnown RBP17.76■□□□□ 0.43
EDEM3-201ENST00000318130 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
EDEM3-201ENST00000318130 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
EDEM3-201ENST00000318130 EID1Q9Y6B2 187 aa17.74■□□□□ 0.43
EDEM3-201ENST00000318130 SPRYD3Q8NCJ5 442 aa17.74■□□□□ 0.43
EDEM3-201ENST00000318130 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
EDEM3-201ENST00000318130 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
EDEM3-201ENST00000318130 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
EDEM3-201ENST00000318130 MSNP26038 577 aaKnown RBP17.72■□□□□ 0.43
EDEM3-201ENST00000318130 TSHZ2Q9NRE2 1034 aa17.71■□□□□ 0.43
EDEM3-201ENST00000318130 CARMIL1Q5VZK9 1371 aa17.71■□□□□ 0.43
EDEM3-201ENST00000318130 NGEFQ8N5V2 710 aa17.7■□□□□ 0.42
EDEM3-201ENST00000318130 HSCBQ8IWL3 235 aa17.7■□□□□ 0.42
EDEM3-201ENST00000318130 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
EDEM3-201ENST00000318130 SOGA1O94964 1423 aa17.68■□□□□ 0.42
EDEM3-201ENST00000318130 HDGFL2Q7Z4V5 671 aaPredicted RBP17.68■□□□□ 0.42
EDEM3-201ENST00000318130 FBXW7Q969H0 707 aa17.67■□□□□ 0.42
EDEM3-201ENST00000318130 PPP1R1BQ9UD71 204 aaPredicted RBP17.67■□□□□ 0.42
EDEM3-201ENST00000318130 PKD2Q13563 968 aa17.66■□□□□ 0.42
EDEM3-201ENST00000318130 TMF1P82094 1093 aa17.66■□□□□ 0.42
EDEM3-201ENST00000318130 CCER2I3L3R5 266 aa17.66■□□□□ 0.42
EDEM3-201ENST00000318130 CHAF1AQ13111 956 aaPredicted RBP17.66■□□□□ 0.42
EDEM3-201ENST00000318130 PDE4CQ08493 712 aa17.65■□□□□ 0.42
EDEM3-201ENST00000318130 GOLGA6L6A8MZA4 724 aa17.64■□□□□ 0.41
EDEM3-201ENST00000318130 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
EDEM3-201ENST00000318130 GTF2E1P29083 439 aaPredicted RBP17.64■□□□□ 0.41
EDEM3-201ENST00000318130 FAM69CQ0P6D2 419 aa17.63■□□□□ 0.41
EDEM3-201ENST00000318130 EEA1Q15075 1411 aa17.63■□□□□ 0.41
EDEM3-201ENST00000318130 PIP4K2BP78356 416 aa17.62■□□□□ 0.41
EDEM3-201ENST00000318130 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
EDEM3-201ENST00000318130 ARID3AQ99856 593 aa17.61■□□□□ 0.41
EDEM3-201ENST00000318130 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
EDEM3-201ENST00000318130 AMPHP49418 695 aa17.61■□□□□ 0.41
EDEM3-201ENST00000318130 RAD21O60216 631 aa17.6■□□□□ 0.41
EDEM3-201ENST00000318130 GZF1Q9H116 711 aaPredicted RBP17.59■□□□□ 0.41
EDEM3-201ENST00000318130 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
EDEM3-201ENST00000318130 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
EDEM3-201ENST00000318130 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
EDEM3-201ENST00000318130 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
EDEM3-201ENST00000318130 FRAT2O75474 233 aaPredicted RBP17.58■□□□□ 0.41
EDEM3-201ENST00000318130 MS4A1P11836 297 aa17.58■□□□□ 0.41
EDEM3-201ENST00000318130 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.41
EDEM3-201ENST00000318130 NRDCO43847 1150 aa17.58■□□□□ 0.4
EDEM3-201ENST00000318130 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
EDEM3-201ENST00000318130 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
EDEM3-201ENST00000318130 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
EDEM3-201ENST00000318130 NUTM2AQ8IVF1 878 aaPredicted RBP17.57■□□□□ 0.4
EDEM3-201ENST00000318130 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
EDEM3-201ENST00000318130 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
EDEM3-201ENST00000318130 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
EDEM3-201ENST00000318130 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
EDEM3-201ENST00000318130 GOLGA6L4A6NEF3 574 aa17.56■□□□□ 0.4
EDEM3-201ENST00000318130 SLKQ9H2G2 1235 aaPredicted RBP17.56■□□□□ 0.4
EDEM3-201ENST00000318130 PRM3Q9NNZ6 103 aa17.56■□□□□ 0.4
EDEM3-201ENST00000318130 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
EDEM3-201ENST00000318130 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
EDEM3-201ENST00000318130 VPS53Q5VIR6 699 aa17.55■□□□□ 0.4
EDEM3-201ENST00000318130 NECTIN2Q92692 538 aa17.55■□□□□ 0.4
EDEM3-201ENST00000318130 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
EDEM3-201ENST00000318130 EFCAB2Q5VUJ9 269 aa17.54■□□□□ 0.4
EDEM3-201ENST00000318130 DRC7Q8IY82 874 aa17.54■□□□□ 0.4
EDEM3-201ENST00000318130 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
EDEM3-201ENST00000318130 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
EDEM3-201ENST00000318130 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
EDEM3-201ENST00000318130 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
EDEM3-201ENST00000318130 IPO9Q96P70 1041 aaKnown RBP17.52■□□□□ 0.4
EDEM3-201ENST00000318130 SPAG9O60271 1321 aaKnown RBP17.52■□□□□ 0.4
EDEM3-201ENST00000318130 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
EDEM3-201ENST00000318130 NUP155O75694 1391 aa17.51■□□□□ 0.39
EDEM3-201ENST00000318130 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
EDEM3-201ENST00000318130 KANK4Q5T7N3 995 aaPredicted RBP17.5■□□□□ 0.39
EDEM3-201ENST00000318130 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
EDEM3-201ENST00000318130 GBP4Q96PP9 640 aa17.49■□□□□ 0.39
EDEM3-201ENST00000318130 WIZO95785 1651 aa17.49■□□□□ 0.39
EDEM3-201ENST00000318130 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
EDEM3-201ENST00000318130 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
EDEM3-201ENST00000318130 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
EDEM3-201ENST00000318130 NOL8Q76FK4 1167 aaKnown RBP17.46■□□□□ 0.39
EDEM3-201ENST00000318130 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
EDEM3-201ENST00000318130 TOMM22Q9NS69 142 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms