RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 KIF14Q15058 1648 aa29.49■■■□□ 2.31
TTC39C-202ENST00000317571 DDX10Q13206 875 aaKnown RBP29.49■■■□□ 2.31
TTC39C-202ENST00000317571 KCNH8Q96L42 1107 aa29.46■■■□□ 2.31
TTC39C-202ENST00000317571 TRIM52Q96A61 297 aa29.45■■■□□ 2.3
TTC39C-202ENST00000317571 CDK11AQ9UQ88 783 aaPredicted RBP29.44■■■□□ 2.3
TTC39C-202ENST00000317571 ROCK1Q13464 1354 aa29.44■■■□□ 2.3
TTC39C-202ENST00000317571 CARMIL2Q6F5E8 1435 aa29.44■■■□□ 2.3
TTC39C-202ENST00000317571 ADCY10Q96PN6 1610 aa29.44■■■□□ 2.3
TTC39C-202ENST00000317571 GPATCH8Q9UKJ3 1502 aaKnown RBP29.4■■■□□ 2.3
TTC39C-202ENST00000317571 MPHOSPH9Q99550 1183 aa29.4■■■□□ 2.3
TTC39C-202ENST00000317571 ABCA8O94911 1581 aa29.4■■■□□ 2.3
TTC39C-202ENST00000317571 CAMSAP2Q08AD1 1489 aa29.4■■■□□ 2.3
TTC39C-202ENST00000317571 ITSN2Q9NZM3 1697 aa29.38■■■□□ 2.29
TTC39C-202ENST00000317571 FOXD1Q16676 465 aa29.36■■■□□ 2.29
TTC39C-202ENST00000317571 CFDP1Q9UEE9 299 aaPredicted RBP29.31■■■□□ 2.28
TTC39C-202ENST00000317571 ATP10BO94823 1461 aa29.3■■■□□ 2.28
TTC39C-202ENST00000317571 CROCC2H7BZ55 1655 aa29.28■■■□□ 2.28
TTC39C-202ENST00000317571 CDC42BPAQ5VT25 1732 aa29.27■■■□□ 2.28
TTC39C-202ENST00000317571 ADGBQ8N7X0 1667 aa29.26■■■□□ 2.28
TTC39C-202ENST00000317571 ANKRD30BQ9BXX2 1392 aa29.26■■■□□ 2.27
TTC39C-202ENST00000317571 ABCC10Q5T3U5 1492 aa29.26■■■□□ 2.27
TTC39C-202ENST00000317571 NCOA1Q15788 1441 aa29.25■■■□□ 2.27
TTC39C-202ENST00000317571 ZNF777Q9ULD5 760 aaPredicted RBP29.23■■■□□ 2.27
TTC39C-202ENST00000317571 CHD1O14646 1710 aa29.22■■■□□ 2.27
TTC39C-202ENST00000317571 ADGRL2O95490 1459 aa29.21■■■□□ 2.27
TTC39C-202ENST00000317571 PZPP20742 1482 aa29.21■■■□□ 2.27
TTC39C-202ENST00000317571 L3MBTL2Q969R5 705 aa29.21■■■□□ 2.27
TTC39C-202ENST00000317571 RPRD2Q5VT52 1461 aaKnown RBP29.19■■■□□ 2.26
TTC39C-202ENST00000317571 TEX14Q8IWB6 1497 aa29.17■■■□□ 2.26
TTC39C-202ENST00000317571 PLEKHD1A6NEE1 506 aa29.16■■■□□ 2.26
TTC39C-202ENST00000317571 SLC4A1APQ9BWU0 796 aaKnown RBP29.14■■■□□ 2.26
TTC39C-202ENST00000317571 HSPA5P11021 654 aaKnown RBP29.13■■■□□ 2.25
TTC39C-202ENST00000317571 PTPRGP23470 1445 aa29.12■■■□□ 2.25
TTC39C-202ENST00000317571 NBPF8Q3BBV2 869 aa29.08■■■□□ 2.25
TTC39C-202ENST00000317571 WASHC2AQ641Q2 1341 aa29.08■■■□□ 2.25
TTC39C-202ENST00000317571 ANP32CO43423 234 aa29.07■■■□□ 2.24
TTC39C-202ENST00000317571 SHROOM2Q13796 1616 aa29.07■■■□□ 2.24
TTC39C-202ENST00000317571 ANKRD30AQ9BXX3 1397 aa29.06■■■□□ 2.24
TTC39C-202ENST00000317571 CCER2I3L3R5 266 aa29.05■■■□□ 2.24
TTC39C-202ENST00000317571 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
TTC39C-202ENST00000317571 ERCC6L2Q5T890 1561 aa29.03■■■□□ 2.24
TTC39C-202ENST00000317571 C9orf84Q5VXU9 1444 aa29.03■■■□□ 2.24
TTC39C-202ENST00000317571 ANKRD50Q9ULJ7 1429 aa29.03■■■□□ 2.24
TTC39C-202ENST00000317571 EIF4G2P78344 907 aaKnown RBP eCLIP29.01■■■□□ 2.23
TTC39C-202ENST00000317571 CDC42BPBQ9Y5S2 1711 aa29■■■□□ 2.23
TTC39C-202ENST00000317571 KIAA1107Q9UPP5 1409 aa28.99■■■□□ 2.23
TTC39C-202ENST00000317571 MBD5Q9P267 1494 aa28.98■■■□□ 2.23
TTC39C-202ENST00000317571 SUPT16HQ9Y5B9 1047 aaKnown RBP28.98■■■□□ 2.23
TTC39C-202ENST00000317571 SAMD9LQ8IVG5 1584 aa28.98■■■□□ 2.23
TTC39C-202ENST00000317571 C11orf95C9JLR9 678 aaPredicted RBP28.97■■■□□ 2.23
TTC39C-202ENST00000317571 PREX2Q70Z35 1606 aa28.96■■■□□ 2.23
TTC39C-202ENST00000317571 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
TTC39C-202ENST00000317571 HNRNPMP52272 730 aaKnown RBP eCLIP28.95■■■□□ 2.22
TTC39C-202ENST00000317571 PKD2Q13563 968 aa28.94■■■□□ 2.22
TTC39C-202ENST00000317571 SPATA31E1Q6ZUB1 1445 aa28.92■■■□□ 2.22
TTC39C-202ENST00000317571 TTC37Q6PGP7 1564 aa28.91■■■□□ 2.22
TTC39C-202ENST00000317571 KDM5DQ9BY66 1539 aa28.88■■■□□ 2.21
TTC39C-202ENST00000317571 KIF15Q9NS87 1388 aa28.87■■■□□ 2.21
TTC39C-202ENST00000317571 NUP155O75694 1391 aa28.87■■■□□ 2.21
TTC39C-202ENST00000317571 CCDC7Q96M83 1385 aa28.87■■■□□ 2.21
TTC39C-202ENST00000317571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.86■■■□□ 2.21
TTC39C-202ENST00000317571 CNTLNQ9NXG0 1405 aa28.86■■■□□ 2.21
TTC39C-202ENST00000317571 ABCC2Q92887 1545 aa28.85■■■□□ 2.21
TTC39C-202ENST00000317571 CCDC141Q6ZP82 1450 aa28.85■■■□□ 2.21
TTC39C-202ENST00000317571 TSPY4P0CV99 314 aa28.85■■■□□ 2.21
TTC39C-202ENST00000317571 TSPY10P0CW01 314 aa28.85■■■□□ 2.21
TTC39C-202ENST00000317571 SYCP2Q9BX26 1530 aa28.82■■■□□ 2.2
TTC39C-202ENST00000317571 POLR1AO95602 1720 aaPredicted RBP28.81■■■□□ 2.2
TTC39C-202ENST00000317571 CLASP1Q7Z460 1538 aa28.78■■■□□ 2.2
TTC39C-202ENST00000317571 ARHGAP5Q13017 1502 aa28.77■■■□□ 2.2
TTC39C-202ENST00000317571 KIF7Q2M1P5 1343 aa28.76■■■□□ 2.19
TTC39C-202ENST00000317571 MYO5CQ9NQX4 1742 aa28.73■■■□□ 2.19
TTC39C-202ENST00000317571 BCORL1Q5H9F3 1711 aa28.73■■■□□ 2.19
TTC39C-202ENST00000317571 MAST1Q9Y2H9 1570 aa28.72■■■□□ 2.19
TTC39C-202ENST00000317571 CCDC184Q52MB2 194 aa28.71■■■□□ 2.19
TTC39C-202ENST00000317571 ZNF326Q5BKZ1 582 aaKnown RBP28.71■■■□□ 2.19
TTC39C-202ENST00000317571 FAM135AQ9P2D6 1515 aa28.7■■■□□ 2.19
TTC39C-202ENST00000317571 ZCCHC11Q5TAX3 1644 aaKnown RBP28.7■■■□□ 2.18
TTC39C-202ENST00000317571 KDM5CP41229 1560 aa28.69■■■□□ 2.18
TTC39C-202ENST00000317571 UHRF1BP1Q6BDS2 1440 aa28.69■■■□□ 2.18
TTC39C-202ENST00000317571 ARHGEF12Q9NZN5 1544 aa28.68■■■□□ 2.18
TTC39C-202ENST00000317571 USP47Q96K76 1375 aa28.67■■■□□ 2.18
TTC39C-202ENST00000317571 RSPH4AQ5TD94 716 aa28.67■■■□□ 2.18
TTC39C-202ENST00000317571 PRKRIP1Q9H875 184 aaPredicted RBP28.65■■■□□ 2.18
TTC39C-202ENST00000317571 RALGAPBQ86X10 1494 aa28.64■■■□□ 2.18
TTC39C-202ENST00000317571 UNC13BO14795 1591 aa28.64■■■□□ 2.18
TTC39C-202ENST00000317571 PLXNC1O60486 1568 aa28.62■■■□□ 2.17
TTC39C-202ENST00000317571 UHRF1BP1LA0JNW5 1464 aa28.61■■■□□ 2.17
TTC39C-202ENST00000317571 FKBP8Q14318 412 aa28.58■■■□□ 2.17
TTC39C-202ENST00000317571 PLCH2O75038 1416 aa28.57■■■□□ 2.16
TTC39C-202ENST00000317571 HNRNPUQ00839 825 aaKnown RBP eCLIP28.57■■■□□ 2.16
TTC39C-202ENST00000317571 PLEKHH2Q8IVE3 1493 aa28.57■■■□□ 2.16
TTC39C-202ENST00000317571 PLA2R1Q13018 1463 aa28.56■■■□□ 2.16
TTC39C-202ENST00000317571 BCANQ96GW7 911 aa28.54■■■□□ 2.16
TTC39C-202ENST00000317571 DHX29Q7Z478 1369 aaKnown RBP28.54■■■□□ 2.16
TTC39C-202ENST00000317571 KDM2AQ9Y2K7 1162 aa28.53■■■□□ 2.16
TTC39C-202ENST00000317571 IQGAP3Q86VI3 1631 aa28.53■■■□□ 2.16
TTC39C-202ENST00000317571 ABCC1P33527 1531 aa28.52■■■□□ 2.16
TTC39C-202ENST00000317571 DCAF11Q8TEB1 546 aa28.51■■■□□ 2.15
TTC39C-202ENST00000317571 DUOX2Q9NRD8 1548 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms