RNA–Protein interactions for RNA: ENST00000315480.8

USP20-201, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-201ENST00000315480 WIZO95785 1651 aa16.91■□□□□ 0.3
USP20-201ENST00000315480 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
USP20-201ENST00000315480 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
USP20-201ENST00000315480 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
USP20-201ENST00000315480 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
USP20-201ENST00000315480 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
USP20-201ENST00000315480 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
USP20-201ENST00000315480 CHMP4AQ9BY43 222 aa16.85■□□□□ 0.29
USP20-201ENST00000315480 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
USP20-201ENST00000315480 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
USP20-201ENST00000315480 EIF3AQ14152 1382 aaKnown RBP16.82■□□□□ 0.28
USP20-201ENST00000315480 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
USP20-201ENST00000315480 BECN1Q14457 450 aa16.81■□□□□ 0.28
USP20-201ENST00000315480 OS9Q13438 667 aaPredicted RBP16.81■□□□□ 0.28
USP20-201ENST00000315480 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
USP20-201ENST00000315480 FOXD1Q16676 465 aa16.8■□□□□ 0.28
USP20-201ENST00000315480 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
USP20-201ENST00000315480 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
USP20-201ENST00000315480 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
USP20-201ENST00000315480 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
USP20-201ENST00000315480 CALD1Q05682 793 aaKnown RBP16.78■□□□□ 0.28
USP20-201ENST00000315480 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
USP20-201ENST00000315480 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
USP20-201ENST00000315480 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.27
USP20-201ENST00000315480 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
USP20-201ENST00000315480 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
USP20-201ENST00000315480 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
USP20-201ENST00000315480 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
USP20-201ENST00000315480 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
USP20-201ENST00000315480 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
USP20-201ENST00000315480 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
USP20-201ENST00000315480 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
USP20-201ENST00000315480 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
USP20-201ENST00000315480 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
USP20-201ENST00000315480 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
USP20-201ENST00000315480 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
USP20-201ENST00000315480 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
USP20-201ENST00000315480 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
USP20-201ENST00000315480 RALBP1Q15311 655 aa16.69■□□□□ 0.26
USP20-201ENST00000315480 SUPT16HQ9Y5B9 1047 aaKnown RBP16.69■□□□□ 0.26
USP20-201ENST00000315480 IGF1RP08069 1367 aa16.68■□□□□ 0.26
USP20-201ENST00000315480 FGD1P98174 961 aa16.68■□□□□ 0.26
USP20-201ENST00000315480 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
USP20-201ENST00000315480 KCNJ4P48050 445 aa16.67■□□□□ 0.26
USP20-201ENST00000315480 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
USP20-201ENST00000315480 CCER2I3L3R5 266 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 CCDC144AA2RUR9 1427 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 AMPHP49418 695 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
USP20-201ENST00000315480 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
USP20-201ENST00000315480 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
USP20-201ENST00000315480 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
USP20-201ENST00000315480 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
USP20-201ENST00000315480 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
USP20-201ENST00000315480 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
USP20-201ENST00000315480 NBR1Q14596 966 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 LMOD3Q0VAK6 560 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 RGS3P49796 1198 aa16.6■□□□□ 0.25
USP20-201ENST00000315480 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
USP20-201ENST00000315480 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.6■□□□□ 0.25
USP20-201ENST00000315480 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■■■■■ 33.9
USP20-201ENST00000315480 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
USP20-201ENST00000315480 STAC3Q96MF2 364 aa16.58■□□□□ 0.24
USP20-201ENST00000315480 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
USP20-201ENST00000315480 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
USP20-201ENST00000315480 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
USP20-201ENST00000315480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP20-201ENST00000315480 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
USP20-201ENST00000315480 MCCP23508 829 aa16.53■□□□□ 0.24
USP20-201ENST00000315480 COG3Q96JB2 828 aa16.52■□□□□ 0.24
USP20-201ENST00000315480 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.23
USP20-201ENST00000315480 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
USP20-201ENST00000315480 EVA1CP58658 441 aa16.51■□□□□ 0.23
USP20-201ENST00000315480 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
USP20-201ENST00000315480 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
USP20-201ENST00000315480 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
USP20-201ENST00000315480 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
USP20-201ENST00000315480 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
USP20-201ENST00000315480 CFTRP13569 1480 aa16.48■□□□□ 0.23
USP20-201ENST00000315480 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
USP20-201ENST00000315480 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
USP20-201ENST00000315480 HMMRO75330 724 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
USP20-201ENST00000315480 ISY1Q9ULR0 285 aaKnown RBP16.46■□□□□ 0.23
USP20-201ENST00000315480 PSME1Q06323 249 aa16.45■□□□□ 0.22
USP20-201ENST00000315480 ATF3P18847 181 aa16.45■□□□□ 0.22
USP20-201ENST00000315480 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
USP20-201ENST00000315480 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
USP20-201ENST00000315480 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
USP20-201ENST00000315480 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
USP20-201ENST00000315480 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
USP20-201ENST00000315480 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
USP20-201ENST00000315480 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms