RNA–Protein interactions for RNA: ENST00000315480.8

USP20-201, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,458 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-201ENST00000315480 WIZO95785 1651 aa16.91■□□□□ 0.3
USP20-201ENST00000315480 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
USP20-201ENST00000315480 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
USP20-201ENST00000315480 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
USP20-201ENST00000315480 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
USP20-201ENST00000315480 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
USP20-201ENST00000315480 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
USP20-201ENST00000315480 CHMP4AQ9BY43 222 aa16.85■□□□□ 0.29
USP20-201ENST00000315480 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
USP20-201ENST00000315480 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
USP20-201ENST00000315480 EIF3AQ14152 1382 aaKnown RBP16.82■□□□□ 0.28
USP20-201ENST00000315480 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
USP20-201ENST00000315480 BECN1Q14457 450 aa16.81■□□□□ 0.28
USP20-201ENST00000315480 OS9Q13438 667 aaPredicted RBP16.81■□□□□ 0.28
USP20-201ENST00000315480 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
USP20-201ENST00000315480 FOXD1Q16676 465 aa16.8■□□□□ 0.28
USP20-201ENST00000315480 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
USP20-201ENST00000315480 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
USP20-201ENST00000315480 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
USP20-201ENST00000315480 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
USP20-201ENST00000315480 CALD1Q05682 793 aaKnown RBP16.78■□□□□ 0.28
USP20-201ENST00000315480 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
USP20-201ENST00000315480 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
USP20-201ENST00000315480 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.27
USP20-201ENST00000315480 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
USP20-201ENST00000315480 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
USP20-201ENST00000315480 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
USP20-201ENST00000315480 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
USP20-201ENST00000315480 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
USP20-201ENST00000315480 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
USP20-201ENST00000315480 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
USP20-201ENST00000315480 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
USP20-201ENST00000315480 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
USP20-201ENST00000315480 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
USP20-201ENST00000315480 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
USP20-201ENST00000315480 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
USP20-201ENST00000315480 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
USP20-201ENST00000315480 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
USP20-201ENST00000315480 RALBP1Q15311 655 aa16.69■□□□□ 0.26
USP20-201ENST00000315480 SUPT16HQ9Y5B9 1047 aaKnown RBP16.69■□□□□ 0.26
USP20-201ENST00000315480 IGF1RP08069 1367 aa16.68■□□□□ 0.26
USP20-201ENST00000315480 FGD1P98174 961 aa16.68■□□□□ 0.26
USP20-201ENST00000315480 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
USP20-201ENST00000315480 KCNJ4P48050 445 aa16.67■□□□□ 0.26
USP20-201ENST00000315480 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
USP20-201ENST00000315480 CCER2I3L3R5 266 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 CCDC144AA2RUR9 1427 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 AMPHP49418 695 aa16.66■□□□□ 0.26
USP20-201ENST00000315480 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
USP20-201ENST00000315480 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
USP20-201ENST00000315480 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
USP20-201ENST00000315480 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
USP20-201ENST00000315480 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
USP20-201ENST00000315480 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
USP20-201ENST00000315480 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
USP20-201ENST00000315480 NBR1Q14596 966 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 LMOD3Q0VAK6 560 aa16.61■□□□□ 0.25
USP20-201ENST00000315480 RGS3P49796 1198 aa16.6■□□□□ 0.25
USP20-201ENST00000315480 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
USP20-201ENST00000315480 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.6■□□□□ 0.25
USP20-201ENST00000315480 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■■■■■ 33.9
USP20-201ENST00000315480 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
USP20-201ENST00000315480 STAC3Q96MF2 364 aa16.58■□□□□ 0.24
USP20-201ENST00000315480 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
USP20-201ENST00000315480 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
USP20-201ENST00000315480 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
USP20-201ENST00000315480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP20-201ENST00000315480 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
USP20-201ENST00000315480 MCCP23508 829 aa16.53■□□□□ 0.24
USP20-201ENST00000315480 COG3Q96JB2 828 aa16.52■□□□□ 0.24
USP20-201ENST00000315480 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.23
USP20-201ENST00000315480 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
USP20-201ENST00000315480 EVA1CP58658 441 aa16.51■□□□□ 0.23
USP20-201ENST00000315480 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
USP20-201ENST00000315480 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
USP20-201ENST00000315480 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
USP20-201ENST00000315480 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
USP20-201ENST00000315480 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
USP20-201ENST00000315480 CFTRP13569 1480 aa16.48■□□□□ 0.23
USP20-201ENST00000315480 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
USP20-201ENST00000315480 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
USP20-201ENST00000315480 HMMRO75330 724 aa16.47■□□□□ 0.23
USP20-201ENST00000315480 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
USP20-201ENST00000315480 ISY1Q9ULR0 285 aaKnown RBP16.46■□□□□ 0.23
USP20-201ENST00000315480 PSME1Q06323 249 aa16.45■□□□□ 0.22
USP20-201ENST00000315480 ATF3P18847 181 aa16.45■□□□□ 0.22
USP20-201ENST00000315480 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
USP20-201ENST00000315480 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
USP20-201ENST00000315480 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
USP20-201ENST00000315480 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
USP20-201ENST00000315480 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
USP20-201ENST00000315480 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
USP20-201ENST00000315480 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms