RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 TRIM52Q96A61 297 aa30.26■■■□□ 2.43
LPCAT4-201ENST00000314891 ADCY10Q96PN6 1610 aa30.25■■■□□ 2.43
LPCAT4-201ENST00000314891 HIRIP3Q9BW71 556 aaPredicted RBP30.24■■■□□ 2.43
LPCAT4-201ENST00000314891 KDM5BQ9UGL1 1544 aa30.24■■■□□ 2.43
LPCAT4-201ENST00000314891 ITSN2Q9NZM3 1697 aa30.23■■■□□ 2.43
LPCAT4-201ENST00000314891 ROCK1Q13464 1354 aa30.21■■■□□ 2.43
LPCAT4-201ENST00000314891 ABCA8O94911 1581 aa30.21■■■□□ 2.43
LPCAT4-201ENST00000314891 CAMSAP2Q08AD1 1489 aa30.19■■■□□ 2.42
LPCAT4-201ENST00000314891 GPATCH8Q9UKJ3 1502 aaKnown RBP30.18■■■□□ 2.42
LPCAT4-201ENST00000314891 DDX10Q13206 875 aaKnown RBP30.18■■■□□ 2.42
LPCAT4-201ENST00000314891 MPHOSPH9Q99550 1183 aa30.17■■■□□ 2.42
LPCAT4-201ENST00000314891 CFDP1Q9UEE9 299 aaPredicted RBP30.15■■■□□ 2.42
LPCAT4-201ENST00000314891 CHD1O14646 1710 aa30.13■■■□□ 2.41
LPCAT4-201ENST00000314891 ATP10BO94823 1461 aa30.11■■■□□ 2.41
LPCAT4-201ENST00000314891 FOXD1Q16676 465 aa30.1■■■□□ 2.41
LPCAT4-201ENST00000314891 CDC42BPAQ5VT25 1732 aa30.09■■■□□ 2.41
LPCAT4-201ENST00000314891 ADGBQ8N7X0 1667 aa30.08■■■□□ 2.41
LPCAT4-201ENST00000314891 CROCC2H7BZ55 1655 aa30.08■■■□□ 2.41
LPCAT4-201ENST00000314891 ZNF777Q9ULD5 760 aaPredicted RBP30.07■■■□□ 2.4
LPCAT4-201ENST00000314891 KCNH8Q96L42 1107 aa30.06■■■□□ 2.4
LPCAT4-201ENST00000314891 PLEKHD1A6NEE1 506 aa30.03■■■□□ 2.4
LPCAT4-201ENST00000314891 ABCC10Q5T3U5 1492 aa30.03■■■□□ 2.4
LPCAT4-201ENST00000314891 NCOA1Q15788 1441 aa30.01■■■□□ 2.39
LPCAT4-201ENST00000314891 PTPRGP23470 1445 aa29.99■■■□□ 2.39
LPCAT4-201ENST00000314891 ANKRD30BQ9BXX2 1392 aa29.98■■■□□ 2.39
LPCAT4-201ENST00000314891 ADGRL2O95490 1459 aa29.97■■■□□ 2.39
LPCAT4-201ENST00000314891 SLC4A1APQ9BWU0 796 aaKnown RBP29.94■■■□□ 2.38
LPCAT4-201ENST00000314891 L3MBTL2Q969R5 705 aa29.93■■■□□ 2.38
LPCAT4-201ENST00000314891 PZPP20742 1482 aa29.92■■■□□ 2.38
LPCAT4-201ENST00000314891 RPRD2Q5VT52 1461 aaKnown RBP29.92■■■□□ 2.38
LPCAT4-201ENST00000314891 SHROOM2Q13796 1616 aa29.92■■■□□ 2.38
LPCAT4-201ENST00000314891 ANKRD30AQ9BXX3 1397 aa29.87■■■□□ 2.37
LPCAT4-201ENST00000314891 TEX14Q8IWB6 1497 aa29.86■■■□□ 2.37
LPCAT4-201ENST00000314891 ERCC6L2Q5T890 1561 aa29.84■■■□□ 2.37
LPCAT4-201ENST00000314891 HSPA5P11021 654 aaKnown RBP29.84■■■□□ 2.37
LPCAT4-201ENST00000314891 CDC42BPBQ9Y5S2 1711 aa29.83■■■□□ 2.37
LPCAT4-201ENST00000314891 SHANK2Q9UPX8 1470 aa29.82■■■□□ 2.36
LPCAT4-201ENST00000314891 C9orf84Q5VXU9 1444 aa29.82■■■□□ 2.36
LPCAT4-201ENST00000314891 ANKRD50Q9ULJ7 1429 aa29.81■■■□□ 2.36
LPCAT4-201ENST00000314891 ANP32CO43423 234 aa29.79■■■□□ 2.36
LPCAT4-201ENST00000314891 PREX2Q70Z35 1606 aa29.78■■■□□ 2.36
LPCAT4-201ENST00000314891 SAMD9LQ8IVG5 1584 aa29.77■■■□□ 2.36
LPCAT4-201ENST00000314891 NBPF8Q3BBV2 869 aa29.76■■■□□ 2.36
LPCAT4-201ENST00000314891 HNRNPMP52272 730 aaKnown RBP eCLIP29.76■■■□□ 2.35
LPCAT4-201ENST00000314891 ARHGEF5Q12774 1597 aa29.75■■■□□ 2.35
LPCAT4-201ENST00000314891 EIF4G2P78344 907 aaKnown RBP eCLIP29.75■■■□□ 2.35
LPCAT4-201ENST00000314891 WASHC2AQ641Q2 1341 aa29.75■■■□□ 2.35
LPCAT4-201ENST00000314891 KIAA1107Q9UPP5 1409 aa29.75■■■□□ 2.35
LPCAT4-201ENST00000314891 MBD5Q9P267 1494 aa29.74■■■□□ 2.35
LPCAT4-201ENST00000314891 CCER2I3L3R5 266 aa29.73■■■□□ 2.35
LPCAT4-201ENST00000314891 TTC37Q6PGP7 1564 aa29.71■■■□□ 2.35
LPCAT4-201ENST00000314891 TSPY4P0CV99 314 aa29.71■■■□□ 2.35
LPCAT4-201ENST00000314891 TSPY10P0CW01 314 aa29.71■■■□□ 2.35
LPCAT4-201ENST00000314891 PKD2Q13563 968 aa29.71■■■□□ 2.35
LPCAT4-201ENST00000314891 ABCC2Q92887 1545 aa29.69■■■□□ 2.34
LPCAT4-201ENST00000314891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.66■■■□□ 2.34
LPCAT4-201ENST00000314891 KIF15Q9NS87 1388 aa29.66■■■□□ 2.34
LPCAT4-201ENST00000314891 NUP155O75694 1391 aa29.65■■■□□ 2.34
LPCAT4-201ENST00000314891 CCDC141Q6ZP82 1450 aa29.65■■■□□ 2.34
LPCAT4-201ENST00000314891 CLASP1Q7Z460 1538 aa29.63■■■□□ 2.33
LPCAT4-201ENST00000314891 KDM5DQ9BY66 1539 aa29.62■■■□□ 2.33
LPCAT4-201ENST00000314891 C11orf95C9JLR9 678 aaPredicted RBP29.62■■■□□ 2.33
LPCAT4-201ENST00000314891 SYCP2Q9BX26 1530 aa29.61■■■□□ 2.33
LPCAT4-201ENST00000314891 ARHGAP5Q13017 1502 aa29.6■■■□□ 2.33
LPCAT4-201ENST00000314891 MYO5CQ9NQX4 1742 aa29.6■■■□□ 2.33
LPCAT4-201ENST00000314891 SPATA31E1Q6ZUB1 1445 aa29.58■■■□□ 2.33
LPCAT4-201ENST00000314891 POLR1AO95602 1720 aaPredicted RBP29.56■■■□□ 2.32
LPCAT4-201ENST00000314891 ZCCHC11Q5TAX3 1644 aaKnown RBP29.55■■■□□ 2.32
LPCAT4-201ENST00000314891 CCDC7Q96M83 1385 aa29.54■■■□□ 2.32
LPCAT4-201ENST00000314891 SUPT16HQ9Y5B9 1047 aaKnown RBP29.54■■■□□ 2.32
LPCAT4-201ENST00000314891 CNTLNQ9NXG0 1405 aa29.54■■■□□ 2.32
LPCAT4-201ENST00000314891 PELP1Q8IZL8 1130 aaKnown RBP29.53■■■□□ 2.32
LPCAT4-201ENST00000314891 RSPH4AQ5TD94 716 aa29.51■■■□□ 2.32
LPCAT4-201ENST00000314891 MAST1Q9Y2H9 1570 aa29.5■■■□□ 2.31
LPCAT4-201ENST00000314891 ZNF326Q5BKZ1 582 aaKnown RBP29.48■■■□□ 2.31
LPCAT4-201ENST00000314891 FAM135AQ9P2D6 1515 aa29.47■■■□□ 2.31
LPCAT4-201ENST00000314891 UHRF1BP1LA0JNW5 1464 aa29.45■■■□□ 2.3
LPCAT4-201ENST00000314891 KIF7Q2M1P5 1343 aa29.45■■■□□ 2.3
LPCAT4-201ENST00000314891 ARHGEF12Q9NZN5 1544 aa29.44■■■□□ 2.3
LPCAT4-201ENST00000314891 PLXNC1O60486 1568 aa29.41■■■□□ 2.3
LPCAT4-201ENST00000314891 BCORL1Q5H9F3 1711 aa29.41■■■□□ 2.3
LPCAT4-201ENST00000314891 UNC13BO14795 1591 aa29.4■■■□□ 2.3
LPCAT4-201ENST00000314891 KDM5CP41229 1560 aa29.4■■■□□ 2.3
LPCAT4-201ENST00000314891 PLEKHH2Q8IVE3 1493 aa29.4■■■□□ 2.3
LPCAT4-201ENST00000314891 UHRF1BP1Q6BDS2 1440 aa29.39■■■□□ 2.3
LPCAT4-201ENST00000314891 USP47Q96K76 1375 aa29.39■■■□□ 2.3
LPCAT4-201ENST00000314891 PLCH2O75038 1416 aa29.38■■■□□ 2.29
LPCAT4-201ENST00000314891 RALGAPBQ86X10 1494 aa29.34■■■□□ 2.29
LPCAT4-201ENST00000314891 CCDC184Q52MB2 194 aa29.32■■■□□ 2.28
LPCAT4-201ENST00000314891 PRKRIP1Q9H875 184 aaPredicted RBP29.32■■■□□ 2.28
LPCAT4-201ENST00000314891 ABCC1P33527 1531 aa29.31■■■□□ 2.28
LPCAT4-201ENST00000314891 KDM2AQ9Y2K7 1162 aa29.31■■■□□ 2.28
LPCAT4-201ENST00000314891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.3■■■□□ 2.284e-11■■□□□ 12
LPCAT4-201ENST00000314891 IQGAP3Q86VI3 1631 aa29.3■■■□□ 2.28
LPCAT4-201ENST00000314891 DCAF11Q8TEB1 546 aa29.29■■■□□ 2.28
LPCAT4-201ENST00000314891 DUOX2Q9NRD8 1548 aa29.29■■■□□ 2.28
LPCAT4-201ENST00000314891 EFCAB2Q5VUJ9 269 aa29.28■■■□□ 2.28
LPCAT4-201ENST00000314891 PLA2R1Q13018 1463 aa29.26■■■□□ 2.27
LPCAT4-201ENST00000314891 TRAPPC8Q9Y2L5 1435 aa29.26■■■□□ 2.27
LPCAT4-201ENST00000314891 CCDC144AA2RUR9 1427 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms