RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 RSPH4AQ5TD94 716 aa8.24□□□□□ -1.09
PRKDC-201ENST00000314191 ANP32AP39687 249 aaKnown RBP8.23□□□□□ -1.09
PRKDC-201ENST00000314191 SPAG9O60271 1321 aaKnown RBP8.23□□□□□ -1.09
PRKDC-201ENST00000314191 PEG3Q9GZU2 1588 aa8.22□□□□□ -1.09
PRKDC-201ENST00000314191 SAFB2Q14151 953 aaKnown RBP eCLIP8.22□□□□□ -1.09
PRKDC-201ENST00000314191 UACAQ9BZF9 1416 aa8.22□□□□□ -1.09
PRKDC-201ENST00000314191 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
PRKDC-201ENST00000314191 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-201ENST00000314191 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.1
PRKDC-201ENST00000314191 PRKRIP1Q9H875 184 aaPredicted RBP8.21□□□□□ -1.1
PRKDC-201ENST00000314191 B4GALNT3Q6L9W6 998 aa8.21□□□□□ -1.1
PRKDC-201ENST00000314191 ROCK2O75116 1388 aaKnown RBP8.21□□□□□ -1.1
PRKDC-201ENST00000314191 KANK1Q14678 1352 aa8.21□□□□□ -1.1
PRKDC-201ENST00000314191 PRG4Q92954 1404 aaPredicted RBP8.21□□□□□ -1.1
PRKDC-201ENST00000314191 PPP4R2Q9NY27 417 aa8.2□□□□□ -1.1
PRKDC-201ENST00000314191 POGKQ9P215 609 aa8.2□□□□□ -1.1
PRKDC-201ENST00000314191 ZBTB47Q9UFB7 747 aaPredicted RBP8.2□□□□□ -1.1
PRKDC-201ENST00000314191 MRC2Q9UBG0 1479 aa8.2□□□□□ -1.1
PRKDC-201ENST00000314191 ABCA10Q8WWZ4 1543 aa8.19□□□□□ -1.1
PRKDC-201ENST00000314191 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
PRKDC-201ENST00000314191 PPM1GO15355 546 aaPredicted RBP8.18□□□□□ -1.1
PRKDC-201ENST00000314191 NUTM2DQ5VT03 806 aaPredicted RBP8.18□□□□□ -1.1
PRKDC-201ENST00000314191 STK26Q9P289 416 aa8.18□□□□□ -1.1
PRKDC-201ENST00000314191 CFAP53Q96M91 514 aa8.18□□□□□ -1.1
PRKDC-201ENST00000314191 AFAP1Q8N556 730 aa8.17□□□□□ -1.1
PRKDC-201ENST00000314191 PLEKHG5O94827 1062 aa8.17□□□□□ -1.1
PRKDC-201ENST00000314191 NBPF8Q3BBV2 869 aa8.17□□□□□ -1.1
PRKDC-201ENST00000314191 IFT140Q96RY7 1462 aa8.16□□□□□ -1.1
PRKDC-201ENST00000314191 KTN1Q86UP2 1357 aaKnown RBP8.16□□□□□ -1.1
PRKDC-201ENST00000314191 URB2Q14146 1524 aaKnown RBP8.16□□□□□ -1.1
PRKDC-201ENST00000314191 CYB5RLQ6IPT4 315 aa8.16□□□□□ -1.1
PRKDC-201ENST00000314191 SNAPC4Q5SXM2 1469 aa8.16□□□□□ -1.1
PRKDC-201ENST00000314191 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.1
PRKDC-201ENST00000314191 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.1
PRKDC-201ENST00000314191 SRPK2P78362 688 aaKnown RBP8.15□□□□□ -1.1
PRKDC-201ENST00000314191 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.11
PRKDC-201ENST00000314191 MORC1Q86VD1 984 aa8.15□□□□□ -1.11
PRKDC-201ENST00000314191 CCDC144AA2RUR9 1427 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 ANKRD50Q9ULJ7 1429 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 OSCARQ8IYS5 282 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 WASHC2CQ9Y4E1 1318 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 RALBP1Q15311 655 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 USP47Q96K76 1375 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
PRKDC-201ENST00000314191 KIF7Q2M1P5 1343 aa8.13□□□□□ -1.11
PRKDC-201ENST00000314191 HFM1A2PYH4 1435 aa8.13□□□□□ -1.11
PRKDC-201ENST00000314191 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
PRKDC-201ENST00000314191 FRAT1Q92837 279 aaPredicted RBP8.13□□□□□ -1.11
PRKDC-201ENST00000314191 PANK3Q9H999 370 aa8.12□□□□□ -1.11
PRKDC-201ENST00000314191 CCDC7Q96M83 1385 aa8.12□□□□□ -1.11
PRKDC-201ENST00000314191 TSHZ2Q9NRE2 1034 aa8.12□□□□□ -1.11
PRKDC-201ENST00000314191 EFCAB5A4FU69 1503 aa8.12□□□□□ -1.11
PRKDC-201ENST00000314191 ZNF608Q9ULD9 1512 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-201ENST00000314191 KIAA0586Q9BVV6 1533 aa8.12□□□□□ -1.11
PRKDC-201ENST00000314191 C14orf37Q86TY3 774 aa8.12□□□□□ -1.11
PRKDC-201ENST00000314191 TROQ12816 1431 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-201ENST00000314191 NUDCQ9Y266 331 aa8.12□□□□□ -1.11
PRKDC-201ENST00000314191 LAS1LQ9Y4W2 734 aaKnown RBP8.11□□□□□ -1.11
PRKDC-201ENST00000314191 CDK13Q14004 1512 aaKnown RBP8.11□□□□□ -1.11
PRKDC-201ENST00000314191 MIA2Q96PC5 1412 aa8.11□□□□□ -1.11
PRKDC-201ENST00000314191 NAIPQ13075 1403 aa8.11□□□□□ -1.11
PRKDC-201ENST00000314191 NLRP13Q86W25 1043 aa8.11□□□□□ -1.11
PRKDC-201ENST00000314191 MAPK8IP3Q9UPT6 1336 aa8.11□□□□□ -1.11
PRKDC-201ENST00000314191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.11□□□□□ -1.113e-8■■■□□ 17.8
PRKDC-201ENST00000314191 NBR1Q14596 966 aa8.1□□□□□ -1.11
PRKDC-201ENST00000314191 RBM19Q9Y4C8 960 aaKnown RBP8.1□□□□□ -1.11
PRKDC-201ENST00000314191 CCDC184Q52MB2 194 aa8.1□□□□□ -1.11
PRKDC-201ENST00000314191 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
PRKDC-201ENST00000314191 RGS3P49796 1198 aa8.09□□□□□ -1.11
PRKDC-201ENST00000314191 MYBBP1AQ9BQG0 1328 aaKnown RBP8.09□□□□□ -1.11
PRKDC-201ENST00000314191 SOX12O15370 315 aa8.09□□□□□ -1.11
PRKDC-201ENST00000314191 PLB1Q6P1J6 1458 aa8.09□□□□□ -1.11
PRKDC-201ENST00000314191 TRHP20396 242 aaPredicted RBP8.09□□□□□ -1.12
PRKDC-201ENST00000314191 DAPK1P53355 1430 aa8.08□□□□□ -1.12
PRKDC-201ENST00000314191 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
PRKDC-201ENST00000314191 CCDC146Q8IYE0 955 aa8.08□□□□□ -1.12
PRKDC-201ENST00000314191 UPF2Q9HAU5 1272 aaKnown RBP8.08□□□□□ -1.12
PRKDC-201ENST00000314191 SYNJ2O15056 1496 aa8.07□□□□□ -1.12
PRKDC-201ENST00000314191 C11orf95C9JLR9 678 aaPredicted RBP8.07□□□□□ -1.12
PRKDC-201ENST00000314191 EPRSP07814 1512 aaKnown RBP8.07□□□□□ -1.12
PRKDC-201ENST00000314191 PTPRKQ15262 1439 aa8.07□□□□□ -1.12
PRKDC-201ENST00000314191 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-201ENST00000314191 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.121e-7■■■■□ 20.2
PRKDC-201ENST00000314191 ABCC5O15440 1437 aa8.06□□□□□ -1.12
PRKDC-201ENST00000314191 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
PRKDC-201ENST00000314191 EHBP1L1Q8N3D4 1523 aa8.06□□□□□ -1.12
PRKDC-201ENST00000314191 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
PRKDC-201ENST00000314191 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
PRKDC-201ENST00000314191 PCF11O94913 1555 aaKnown RBP8.05□□□□□ -1.12
PRKDC-201ENST00000314191 HDGFL2Q7Z4V5 671 aaPredicted RBP8.05□□□□□ -1.12
PRKDC-201ENST00000314191 ERICH6BQ5W0A0 696 aa8.05□□□□□ -1.12
PRKDC-201ENST00000314191 CNTLNQ9NXG0 1405 aa8.05□□□□□ -1.12
PRKDC-201ENST00000314191 ANP32EQ9BTT0 268 aa8.04□□□□□ -1.12
PRKDC-201ENST00000314191 HDGFP51858 240 aaKnown RBP8.04□□□□□ -1.12
PRKDC-201ENST00000314191 TMEM132EQ6IEE7 984 aa8.04□□□□□ -1.12
PRKDC-201ENST00000314191 KIAA1107Q9UPP5 1409 aa8.04□□□□□ -1.12
PRKDC-201ENST00000314191 FTSJ3Q8IY81 847 aaKnown RBP8.04□□□□□ -1.12
PRKDC-201ENST00000314191 LMOD2Q6P5Q4 547 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms