RNA–Protein interactions for RNA: ENST00000312216.12

MCTP1-201, Transcript of multiple C2 and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCTP1, Length 2,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTP1-201ENST00000312216 CROCC2H7BZ55 1655 aa13.22□□□□□ -0.29
MCTP1-201ENST00000312216 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
MCTP1-201ENST00000312216 RRP7BPQ9NSQ0 103 aa13.22□□□□□ -0.29
MCTP1-201ENST00000312216 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
MCTP1-201ENST00000312216 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
MCTP1-201ENST00000312216 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
MCTP1-201ENST00000312216 ADGRL2O95490 1459 aa13.19□□□□□ -0.3
MCTP1-201ENST00000312216 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
MCTP1-201ENST00000312216 KDM5BQ9UGL1 1544 aa13.19□□□□□ -0.3
MCTP1-201ENST00000312216 CHD1O14646 1710 aa13.18□□□□□ -0.3
MCTP1-201ENST00000312216 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
MCTP1-201ENST00000312216 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
MCTP1-201ENST00000312216 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
MCTP1-201ENST00000312216 ABCC10Q5T3U5 1492 aa13.16□□□□□ -0.3
MCTP1-201ENST00000312216 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
MCTP1-201ENST00000312216 ATP10BO94823 1461 aa13.15□□□□□ -0.3
MCTP1-201ENST00000312216 CDC42BPAQ5VT25 1732 aa13.15□□□□□ -0.3
MCTP1-201ENST00000312216 CFDP1Q9UEE9 299 aaPredicted RBP13.15□□□□□ -0.3
MCTP1-201ENST00000312216 MPHOSPH9Q99550 1183 aa13.13□□□□□ -0.31
MCTP1-201ENST00000312216 PTPRGP23470 1445 aa13.13□□□□□ -0.31
MCTP1-201ENST00000312216 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
MCTP1-201ENST00000312216 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
MCTP1-201ENST00000312216 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
MCTP1-201ENST00000312216 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
MCTP1-201ENST00000312216 RPRD2Q5VT52 1461 aaKnown RBP13.11□□□□□ -0.31
MCTP1-201ENST00000312216 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
MCTP1-201ENST00000312216 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
MCTP1-201ENST00000312216 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
MCTP1-201ENST00000312216 PZPP20742 1482 aa13.08□□□□□ -0.32
MCTP1-201ENST00000312216 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
MCTP1-201ENST00000312216 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
MCTP1-201ENST00000312216 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
MCTP1-201ENST00000312216 KDM5DQ9BY66 1539 aa13.06□□□□□ -0.32
MCTP1-201ENST00000312216 DDX10Q13206 875 aaKnown RBP13.06□□□□□ -0.32
MCTP1-201ENST00000312216 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
MCTP1-201ENST00000312216 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
MCTP1-201ENST00000312216 KIAA1107Q9UPP5 1409 aa13.04□□□□□ -0.32
MCTP1-201ENST00000312216 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
MCTP1-201ENST00000312216 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
MCTP1-201ENST00000312216 CCDC141Q6ZP82 1450 aa13.03□□□□□ -0.32
MCTP1-201ENST00000312216 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
MCTP1-201ENST00000312216 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
MCTP1-201ENST00000312216 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.33
MCTP1-201ENST00000312216 MAST1Q9Y2H9 1570 aa13.01□□□□□ -0.33
MCTP1-201ENST00000312216 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
MCTP1-201ENST00000312216 ANP32CO43423 234 aa13□□□□□ -0.33
MCTP1-201ENST00000312216 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
MCTP1-201ENST00000312216 TTC37Q6PGP7 1564 aa13□□□□□ -0.33
MCTP1-201ENST00000312216 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
MCTP1-201ENST00000312216 PLEKHH2Q8IVE3 1493 aa12.99□□□□□ -0.33
MCTP1-201ENST00000312216 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
MCTP1-201ENST00000312216 UHRF1BP1LA0JNW5 1464 aa12.99□□□□□ -0.33
MCTP1-201ENST00000312216 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
MCTP1-201ENST00000312216 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
MCTP1-201ENST00000312216 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
MCTP1-201ENST00000312216 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
MCTP1-201ENST00000312216 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
MCTP1-201ENST00000312216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.98□□□□□ -0.33
MCTP1-201ENST00000312216 KIF15Q9NS87 1388 aa12.98□□□□□ -0.33
MCTP1-201ENST00000312216 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
MCTP1-201ENST00000312216 FOXD1Q16676 465 aa12.97□□□□□ -0.33
MCTP1-201ENST00000312216 ARHGAP5Q13017 1502 aa12.97□□□□□ -0.33
MCTP1-201ENST00000312216 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
MCTP1-201ENST00000312216 PLXNC1O60486 1568 aa12.96□□□□□ -0.33
MCTP1-201ENST00000312216 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.33
MCTP1-201ENST00000312216 SYCP2Q9BX26 1530 aa12.96□□□□□ -0.33
MCTP1-201ENST00000312216 ARHGEF12Q9NZN5 1544 aa12.96□□□□□ -0.34
MCTP1-201ENST00000312216 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
MCTP1-201ENST00000312216 UNC13BO14795 1591 aa12.94□□□□□ -0.34
MCTP1-201ENST00000312216 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
MCTP1-201ENST00000312216 NUP155O75694 1391 aa12.93□□□□□ -0.34
MCTP1-201ENST00000312216 PKD2Q13563 968 aa12.93□□□□□ -0.34
MCTP1-201ENST00000312216 WASHC2AQ641Q2 1341 aa12.92□□□□□ -0.34
MCTP1-201ENST00000312216 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
MCTP1-201ENST00000312216 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
MCTP1-201ENST00000312216 UHRF1BP1Q6BDS2 1440 aa12.9□□□□□ -0.34
MCTP1-201ENST00000312216 HNRNPMP52272 730 aaKnown RBP eCLIP12.9□□□□□ -0.34
MCTP1-201ENST00000312216 ARAP3Q8WWN8 1544 aa12.9□□□□□ -0.34
MCTP1-201ENST00000312216 CCDC7Q96M83 1385 aa12.9□□□□□ -0.34
MCTP1-201ENST00000312216 NBPF8Q3BBV2 869 aa12.9□□□□□ -0.34
MCTP1-201ENST00000312216 KCNH8Q96L42 1107 aa12.9□□□□□ -0.34
MCTP1-201ENST00000312216 RALGAPBQ86X10 1494 aa12.89□□□□□ -0.35
MCTP1-201ENST00000312216 ABCC1P33527 1531 aa12.88□□□□□ -0.35
MCTP1-201ENST00000312216 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
MCTP1-201ENST00000312216 PLCH2O75038 1416 aa12.88□□□□□ -0.35
MCTP1-201ENST00000312216 IQGAP3Q86VI3 1631 aa12.87□□□□□ -0.35
MCTP1-201ENST00000312216 ERBINQ96RT1 1412 aa12.87□□□□□ -0.35
MCTP1-201ENST00000312216 MAGI2Q86UL8 1455 aa12.87□□□□□ -0.35
MCTP1-201ENST00000312216 KDM5CP41229 1560 aa12.86□□□□□ -0.35
MCTP1-201ENST00000312216 USP47Q96K76 1375 aa12.83□□□□□ -0.35
MCTP1-201ENST00000312216 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
MCTP1-201ENST00000312216 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
MCTP1-201ENST00000312216 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
MCTP1-201ENST00000312216 KIF7Q2M1P5 1343 aa12.81□□□□□ -0.36
MCTP1-201ENST00000312216 CCDC144AA2RUR9 1427 aa12.81□□□□□ -0.36
MCTP1-201ENST00000312216 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
MCTP1-201ENST00000312216 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
MCTP1-201ENST00000312216 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
MCTP1-201ENST00000312216 ATP10AO60312 1499 aa12.79□□□□□ -0.36
MCTP1-201ENST00000312216 ZFYVE16Q7Z3T8 1539 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms