RNA–Protein interactions for RNA: ENST00000311330.3

CD248-201, Transcript of CD248 molecule, humanhuman

APPRIS P1 BASIC

Gene CD248, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD248-201ENST00000311330 DENND4BO75064 1496 aaPredicted RBP26.32■■□□□ 1.8
CD248-201ENST00000311330 DDX10Q13206 875 aaKnown RBP26.31■■□□□ 1.8
CD248-201ENST00000311330 CFDP1Q9UEE9 299 aaPredicted RBP26.31■■□□□ 1.8
CD248-201ENST00000311330 ZNF777Q9ULD5 760 aaPredicted RBP26.31■■□□□ 1.8
CD248-201ENST00000311330 KIF14Q15058 1648 aa26.3■■□□□ 1.8
CD248-201ENST00000311330 FOXD1Q16676 465 aa26.29■■□□□ 1.8
CD248-201ENST00000311330 MPHOSPH9Q99550 1183 aa26.29■■□□□ 1.8
CD248-201ENST00000311330 DNMT1P26358 1616 aaKnown RBP26.28■■□□□ 1.8
CD248-201ENST00000311330 GPATCH8Q9UKJ3 1502 aaKnown RBP26.25■■□□□ 1.79
CD248-201ENST00000311330 ROCK1Q13464 1354 aa26.24■■□□□ 1.79
CD248-201ENST00000311330 CAMSAP2Q08AD1 1489 aa26.23■■□□□ 1.79
CD248-201ENST00000311330 ABCA8O94911 1581 aa26.23■■□□□ 1.79
CD248-201ENST00000311330 PLEKHD1A6NEE1 506 aa26.22■■□□□ 1.79
CD248-201ENST00000311330 ATP10BO94823 1461 aa26.21■■□□□ 1.79
CD248-201ENST00000311330 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.79
CD248-201ENST00000311330 KCNH8Q96L42 1107 aa26.2■■□□□ 1.78
CD248-201ENST00000311330 ADCY10Q96PN6 1610 aa26.18■■□□□ 1.78
CD248-201ENST00000311330 ITSN2Q9NZM3 1697 aa26.17■■□□□ 1.78
CD248-201ENST00000311330 PTPRGP23470 1445 aa26.16■■□□□ 1.78
CD248-201ENST00000311330 CHD1O14646 1710 aa26.16■■□□□ 1.78
CD248-201ENST00000311330 SLC4A1APQ9BWU0 796 aaKnown RBP26.11■■□□□ 1.77
CD248-201ENST00000311330 NCOA1Q15788 1441 aa26.1■■□□□ 1.77
CD248-201ENST00000311330 L3MBTL2Q969R5 705 aa26.09■■□□□ 1.77
CD248-201ENST00000311330 ABCC10Q5T3U5 1492 aa26.09■■□□□ 1.77
CD248-201ENST00000311330 CDC42BPAQ5VT25 1732 aa26.07■■□□□ 1.76
CD248-201ENST00000311330 ANKRD30BQ9BXX2 1392 aa26.07■■□□□ 1.76
CD248-201ENST00000311330 ADGBQ8N7X0 1667 aa26.02■■□□□ 1.76
CD248-201ENST00000311330 CROCC2H7BZ55 1655 aa26.01■■□□□ 1.75
CD248-201ENST00000311330 ANKRD30AQ9BXX3 1397 aa26.01■■□□□ 1.75
CD248-201ENST00000311330 PZPP20742 1482 aa26■■□□□ 1.75
CD248-201ENST00000311330 HNRNPMP52272 730 aaKnown RBP eCLIP26■■□□□ 1.75
CD248-201ENST00000311330 HSPA5P11021 654 aaKnown RBP26■■□□□ 1.75
CD248-201ENST00000311330 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
CD248-201ENST00000311330 ADGRL2O95490 1459 aa25.99■■□□□ 1.75
CD248-201ENST00000311330 RPRD2Q5VT52 1461 aaKnown RBP25.97■■□□□ 1.75
CD248-201ENST00000311330 C9orf84Q5VXU9 1444 aa25.94■■□□□ 1.74
CD248-201ENST00000311330 NBPF8Q3BBV2 869 aa25.94■■□□□ 1.74
CD248-201ENST00000311330 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
CD248-201ENST00000311330 ANKRD50Q9ULJ7 1429 aa25.94■■□□□ 1.74
CD248-201ENST00000311330 ANP32CO43423 234 aa25.93■■□□□ 1.74
CD248-201ENST00000311330 TSPY4P0CV99 314 aa25.92■■□□□ 1.74
CD248-201ENST00000311330 TSPY10P0CW01 314 aa25.92■■□□□ 1.74
CD248-201ENST00000311330 PKD2Q13563 968 aa25.92■■□□□ 1.74
CD248-201ENST00000311330 EIF4G2P78344 907 aaKnown RBP eCLIP25.91■■□□□ 1.74
CD248-201ENST00000311330 TEX14Q8IWB6 1497 aa25.9■■□□□ 1.74
CD248-201ENST00000311330 WASHC2AQ641Q2 1341 aa25.88■■□□□ 1.73
CD248-201ENST00000311330 SHANK2Q9UPX8 1470 aa25.86■■□□□ 1.73
CD248-201ENST00000311330 KIAA1107Q9UPP5 1409 aa25.86■■□□□ 1.73
CD248-201ENST00000311330 MBD5Q9P267 1494 aa25.86■■□□□ 1.73
CD248-201ENST00000311330 NUP155O75694 1391 aa25.85■■□□□ 1.73
CD248-201ENST00000311330 CDC42BPBQ9Y5S2 1711 aa25.85■■□□□ 1.73
CD248-201ENST00000311330 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
CD248-201ENST00000311330 KIF15Q9NS87 1388 aa25.83■■□□□ 1.73
CD248-201ENST00000311330 C11orf95C9JLR9 678 aaPredicted RBP25.81■■□□□ 1.72
CD248-201ENST00000311330 PREX2Q70Z35 1606 aa25.81■■□□□ 1.72
CD248-201ENST00000311330 TTC37Q6PGP7 1564 aa25.81■■□□□ 1.72
CD248-201ENST00000311330 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
CD248-201ENST00000311330 CCER2I3L3R5 266 aa25.81■■□□□ 1.72
CD248-201ENST00000311330 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
CD248-201ENST00000311330 ZNF326Q5BKZ1 582 aaKnown RBP25.78■■□□□ 1.72
CD248-201ENST00000311330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.78■■□□□ 1.72
CD248-201ENST00000311330 CCDC141Q6ZP82 1450 aa25.77■■□□□ 1.72
CD248-201ENST00000311330 ARHGAP5Q13017 1502 aa25.77■■□□□ 1.72
CD248-201ENST00000311330 SYCP2Q9BX26 1530 aa25.75■■□□□ 1.71
CD248-201ENST00000311330 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
CD248-201ENST00000311330 RSPH4AQ5TD94 716 aa25.69■■□□□ 1.7
CD248-201ENST00000311330 CCDC7Q96M83 1385 aa25.69■■□□□ 1.7
CD248-201ENST00000311330 SPATA31E1Q6ZUB1 1445 aa25.67■■□□□ 1.7
CD248-201ENST00000311330 ZCCHC11Q5TAX3 1644 aaKnown RBP25.66■■□□□ 1.7
CD248-201ENST00000311330 KDM5DQ9BY66 1539 aa25.65■■□□□ 1.7
CD248-201ENST00000311330 SUPT16HQ9Y5B9 1047 aaKnown RBP25.65■■□□□ 1.7
CD248-201ENST00000311330 MYO5CQ9NQX4 1742 aa25.64■■□□□ 1.7
CD248-201ENST00000311330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.64■■□□□ 1.69
CD248-201ENST00000311330 CNTLNQ9NXG0 1405 aa25.63■■□□□ 1.69
CD248-201ENST00000311330 KIF7Q2M1P5 1343 aa25.62■■□□□ 1.69
CD248-201ENST00000311330 KDM2AQ9Y2K7 1162 aa25.62■■□□□ 1.69
CD248-201ENST00000311330 ARHGEF12Q9NZN5 1544 aa25.62■■□□□ 1.69
CD248-201ENST00000311330 FAM135AQ9P2D6 1515 aa25.6■■□□□ 1.69
CD248-201ENST00000311330 UHRF1BP1LA0JNW5 1464 aa25.59■■□□□ 1.69
CD248-201ENST00000311330 PLCH2O75038 1416 aa25.58■■□□□ 1.68
CD248-201ENST00000311330 USP47Q96K76 1375 aa25.56■■□□□ 1.68
CD248-201ENST00000311330 MYT1Q01538 1121 aa25.56■■□□□ 1.68
CD248-201ENST00000311330 EFCAB2Q5VUJ9 269 aa25.56■■□□□ 1.68
CD248-201ENST00000311330 DCAF11Q8TEB1 546 aa25.55■■□□□ 1.68
CD248-201ENST00000311330 MAST1Q9Y2H9 1570 aa25.55■■□□□ 1.68
CD248-201ENST00000311330 PLEKHH2Q8IVE3 1493 aa25.55■■□□□ 1.68
CD248-201ENST00000311330 CCDC184Q52MB2 194 aa25.55■■□□□ 1.68
CD248-201ENST00000311330 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
CD248-201ENST00000311330 PRKRIP1Q9H875 184 aaPredicted RBP25.51■■□□□ 1.67
CD248-201ENST00000311330 UHRF1BP1Q6BDS2 1440 aa25.5■■□□□ 1.67
CD248-201ENST00000311330 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
CD248-201ENST00000311330 CARD11Q9BXL7 1154 aa25.5■■□□□ 1.67
CD248-201ENST00000311330 BCORL1Q5H9F3 1711 aa25.49■■□□□ 1.67
CD248-201ENST00000311330 RGL3Q3MIN7 710 aa25.48■■□□□ 1.67
CD248-201ENST00000311330 PLXNC1O60486 1568 aa25.48■■□□□ 1.67
CD248-201ENST00000311330 CNGB1Q14028 1251 aaPredicted RBP25.48■■□□□ 1.67
CD248-201ENST00000311330 HNRNPUQ00839 825 aaKnown RBP eCLIP25.47■■□□□ 1.67
CD248-201ENST00000311330 UNC13BO14795 1591 aa25.47■■□□□ 1.67
CD248-201ENST00000311330 KDM5CP41229 1560 aa25.46■■□□□ 1.67
CD248-201ENST00000311330 RALGAPBQ86X10 1494 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms